Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC3.3□□□□□ -1.88
Cldn5O54942 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC3.3□□□□□ -1.88
Cldn5O54942 Gm17085-201ENSMUST00000165425 502 ntBASIC3.3□□□□□ -1.88
Cldn5O54942 Gm21842-201ENSMUST00000177552 498 ntBASIC3.3□□□□□ -1.88
Cldn5O54942 Gm21626-201ENSMUST00000177791 498 ntBASIC3.3□□□□□ -1.88
Cldn5O54942 Gm21562-201ENSMUST00000177888 498 ntBASIC3.3□□□□□ -1.88
Cldn5O54942 Gm21539-201ENSMUST00000177925 498 ntBASIC3.3□□□□□ -1.88
Cldn5O54942 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Cldn5O54942 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Cldn5O54942 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Cldn5O54942 Gm17522-201ENSMUST00000178144 498 ntBASIC3.3□□□□□ -1.88
Cldn5O54942 Gm21599-201ENSMUST00000178249 498 ntBASIC3.3□□□□□ -1.88
Cldn5O54942 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Cldn5O54942 Gm21914-201ENSMUST00000178452 498 ntBASIC3.3□□□□□ -1.88
Cldn5O54942 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Cldn5O54942 Gm21723-201ENSMUST00000178692 498 ntBASIC3.3□□□□□ -1.88
Cldn5O54942 Gm21916-201ENSMUST00000178771 498 ntBASIC3.3□□□□□ -1.88
Cldn5O54942 Gm21801-201ENSMUST00000178865 498 ntBASIC3.3□□□□□ -1.88
Cldn5O54942 Gm21633-201ENSMUST00000178941 498 ntBASIC3.3□□□□□ -1.88
Cldn5O54942 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Cldn5O54942 Gm21821-201ENSMUST00000179646 498 ntBASIC3.3□□□□□ -1.88
Cldn5O54942 Gm21588-201ENSMUST00000180074 498 ntBASIC3.3□□□□□ -1.88
Cldn5O54942 Gm21780-201ENSMUST00000180128 498 ntBASIC3.3□□□□□ -1.88
Cldn5O54942 Gm21572-201ENSMUST00000180134 498 ntBASIC3.3□□□□□ -1.88
Cldn5O54942 Gm21529-201ENSMUST00000180175 498 ntBASIC3.3□□□□□ -1.88
Cldn5O54942 Gm28002-201ENSMUST00000184832 100 ntBASIC3.3□□□□□ -1.88
Cldn5O54942 Gm28574-201ENSMUST00000185757 699 ntBASIC3.3□□□□□ -1.88
Cldn5O54942 Gm28339-201ENSMUST00000185845 696 ntBASIC3.3□□□□□ -1.88
Cldn5O54942 Gm28057-201ENSMUST00000186603 615 ntBASIC3.3□□□□□ -1.88
Cldn5O54942 Gm29370-202ENSMUST00000187476 499 ntBASIC3.3□□□□□ -1.88
Cldn5O54942 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.3□□□□□ -1.88
Cldn5O54942 Gm28397-201ENSMUST00000187970 699 ntBASIC3.3□□□□□ -1.88
Cldn5O54942 Gm29576-201ENSMUST00000188020 678 ntBASIC3.3□□□□□ -1.88
Cldn5O54942 Gm28896-201ENSMUST00000188609 696 ntBASIC3.3□□□□□ -1.88
Cldn5O54942 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Cldn5O54942 Gm29366-201ENSMUST00000190481 699 ntBASIC3.3□□□□□ -1.88
Cldn5O54942 Gm28354-201ENSMUST00000190904 678 ntBASIC3.3□□□□□ -1.88
Cldn5O54942 Gm37433-201ENSMUST00000192695 678 ntBASIC3.3□□□□□ -1.88
Cldn5O54942 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC3.3□□□□□ -1.88
Cldn5O54942 Ighv1-41-201ENSMUST00000194414 329 ntBASIC3.3□□□□□ -1.88
Cldn5O54942 Gm37441-201ENSMUST00000194430 678 ntBASIC3.3□□□□□ -1.88
Cldn5O54942 Gm38107-201ENSMUST00000194873 696 ntBASIC3.3□□□□□ -1.88
Cldn5O54942 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC3.3□□□□□ -1.88
Cldn5O54942 Gm44964-201ENSMUST00000207011 273 ntBASIC3.3□□□□□ -1.88
Cldn5O54942 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Cldn5O54942 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Cldn5O54942 CT030135.1-201ENSMUST00000223760 570 ntBASIC3.3□□□□□ -1.88
Cldn5O54942 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC3.3□□□□□ -1.88
Cldn5O54942 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Cldn5O54942 Gm22265-201ENSMUST00000082947 116 ntBASIC3.3□□□□□ -1.88
Cldn5O54942 Gm24610-201ENSMUST00000083270 109 ntBASIC3.3□□□□□ -1.88
Cldn5O54942 Mir16-2-201ENSMUST00000083672 95 ntBASIC3.3□□□□□ -1.88
Cldn5O54942 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Cldn5O54942 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Cldn5O54942 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Cldn5O54942 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Cldn5O54942 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Cldn5O54942 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
Cldn5O54942 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Cldn5O54942 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Cldn5O54942 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Cldn5O54942 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Cldn5O54942 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Cldn5O54942 Mir1198-201ENSMUST00000116995 121 ntBASIC3.29□□□□□ -1.88
Cldn5O54942 Gm9440-201ENSMUST00000119667 539 ntBASIC3.29□□□□□ -1.88
Cldn5O54942 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.29□□□□□ -1.88
Cldn5O54942 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC3.29□□□□□ -1.88
Cldn5O54942 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Cldn5O54942 Gm24198-201ENSMUST00000157812 108 ntBASIC3.29□□□□□ -1.88
Cldn5O54942 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC3.29□□□□□ -1.88
Cldn5O54942 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC3.29□□□□□ -1.88
Cldn5O54942 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC3.29□□□□□ -1.88
Cldn5O54942 Gm26061-201ENSMUST00000175584 108 ntBASIC3.29□□□□□ -1.88
Cldn5O54942 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC3.29□□□□□ -1.88
Cldn5O54942 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC3.29□□□□□ -1.88
Cldn5O54942 Gm23860-201ENSMUST00000179446 132 ntBASIC3.29□□□□□ -1.88
Cldn5O54942 Gm23648-201ENSMUST00000180301 107 ntBASIC3.29□□□□□ -1.88
Cldn5O54942 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.29□□□□□ -1.88
Cldn5O54942 Gm28358-202ENSMUST00000189292 223 ntBASIC3.29□□□□□ -1.88
Cldn5O54942 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC3.29□□□□□ -1.88
Cldn5O54942 Gm8242-202ENSMUST00000193056 475 ntBASIC3.29□□□□□ -1.88
Cldn5O54942 Nras-ps2-201ENSMUST00000195269 178 ntBASIC3.29□□□□□ -1.88
Cldn5O54942 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.29□□□□□ -1.88
Cldn5O54942 Gm19126-201ENSMUST00000207896 509 ntBASIC3.29□□□□□ -1.88
Cldn5O54942 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC3.29□□□□□ -1.88
Cldn5O54942 Gm45778-201ENSMUST00000211959 153 ntBASIC3.29□□□□□ -1.88
Cldn5O54942 Gm7751-201ENSMUST00000212868 709 ntBASIC3.29□□□□□ -1.88
Cldn5O54942 Gm46146-201ENSMUST00000217483 346 ntBASIC3.29□□□□□ -1.88
Cldn5O54942 AC144783.2-201ENSMUST00000219089 195 ntBASIC3.29□□□□□ -1.88
Cldn5O54942 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.29□□□□□ -1.88
Cldn5O54942 AC154252.1-201ENSMUST00000226041 473 ntBASIC3.29□□□□□ -1.88
Cldn5O54942 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.29□□□□□ -1.88
Cldn5O54942 Gm24707-201ENSMUST00000082812 107 ntBASIC3.29□□□□□ -1.88
Cldn5O54942 Gm23932-201ENSMUST00000082914 107 ntBASIC3.29□□□□□ -1.88
Cldn5O54942 Gm23506-201ENSMUST00000083077 107 ntBASIC3.29□□□□□ -1.88
Cldn5O54942 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Cldn5O54942 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Cldn5O54942 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Cldn5O54942 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Cldn5O54942 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 145 ms