Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Smarce1O54941 Gm8074-201ENSMUST00000095071 252 ntBASIC3.81□□□□□ -1.8
Smarce1O54941 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.81□□□□□ -1.8
Smarce1O54941 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Smarce1O54941 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Smarce1O54941 Gm25833-201ENSMUST00000104137 133 ntBASIC3.8□□□□□ -1.8
Smarce1O54941 Gm23530-201ENSMUST00000104564 137 ntBASIC3.8□□□□□ -1.8
Smarce1O54941 Gm12427-201ENSMUST00000117719 302 ntBASIC3.8□□□□□ -1.8
Smarce1O54941 Gm12891-201ENSMUST00000119358 240 ntBASIC3.8□□□□□ -1.8
Smarce1O54941 Gm24936-201ENSMUST00000122598 247 ntBASIC3.8□□□□□ -1.8
Smarce1O54941 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.8□□□□□ -1.8
Smarce1O54941 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Smarce1O54941 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC3.8□□□□□ -1.8
Smarce1O54941 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
Smarce1O54941 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC3.8□□□□□ -1.8
Smarce1O54941 Gm16569-201ENSMUST00000160526 314 ntBASIC3.8□□□□□ -1.8
Smarce1O54941 Gm5709-201ENSMUST00000177879 1165 ntBASIC3.8□□□□□ -1.8
Smarce1O54941 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Smarce1O54941 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.8□□□□□ -1.8
Smarce1O54941 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC3.8□□□□□ -1.8
Smarce1O54941 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Smarce1O54941 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC3.8□□□□□ -1.8
Smarce1O54941 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.8□□□□□ -1.8
Smarce1O54941 Gm45226-201ENSMUST00000206602 288 ntBASIC3.8□□□□□ -1.8
Smarce1O54941 Gm5373-201ENSMUST00000212113 1050 ntBASIC3.8□□□□□ -1.8
Smarce1O54941 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC3.8□□□□□ -1.8
Smarce1O54941 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC3.8□□□□□ -1.8
Smarce1O54941 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Smarce1O54941 Gm9309-201ENSMUST00000223537 546 ntBASIC3.8□□□□□ -1.8
Smarce1O54941 AC170810.3-201ENSMUST00000226177 374 ntBASIC3.8□□□□□ -1.8
Smarce1O54941 AC166344.2-201ENSMUST00000226747 374 ntBASIC3.8□□□□□ -1.8
Smarce1O54941 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Smarce1O54941 Gm3563-201ENSMUST00000172963 1628 ntBASIC3.8□□□□□ -1.8
Smarce1O54941 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Smarce1O54941 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
Smarce1O54941 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Smarce1O54941 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.79□□□□□ -1.8
Smarce1O54941 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
Smarce1O54941 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Smarce1O54941 Gm14910-201ENSMUST00000121037 1805 ntBASIC3.79□□□□□ -1.8
Smarce1O54941 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Smarce1O54941 AC169038.1-201ENSMUST00000227378 1352 ntBASIC3.79□□□□□ -1.8
Smarce1O54941 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Smarce1O54941 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Smarce1O54941 Gm24890-201ENSMUST00000104389 102 ntBASIC3.79□□□□□ -1.8
Smarce1O54941 Gm11429-201ENSMUST00000119089 144 ntBASIC3.79□□□□□ -1.8
Smarce1O54941 Gm12706-201ENSMUST00000121588 698 ntBASIC3.79□□□□□ -1.8
Smarce1O54941 Gm12095-201ENSMUST00000121962 816 ntBASIC3.79□□□□□ -1.8
Smarce1O54941 Gm25052-201ENSMUST00000122661 158 ntBASIC3.79□□□□□ -1.8
Smarce1O54941 Gm25666-201ENSMUST00000157702 107 ntBASIC3.79□□□□□ -1.8
Smarce1O54941 Gm23568-201ENSMUST00000177960 92 ntBASIC3.79□□□□□ -1.8
Smarce1O54941 Gm24829-201ENSMUST00000179245 92 ntBASIC3.79□□□□□ -1.8
Smarce1O54941 Mir6899-201ENSMUST00000184798 64 ntBASIC3.79□□□□□ -1.8
Smarce1O54941 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Smarce1O54941 Gm38329-201ENSMUST00000193473 427 ntBASIC3.79□□□□□ -1.8
Smarce1O54941 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC3.79□□□□□ -1.8
Smarce1O54941 Gm43114-201ENSMUST00000198298 343 ntBASIC3.79□□□□□ -1.8
Smarce1O54941 Gm34779-201ENSMUST00000210036 263 ntBASIC3.79□□□□□ -1.8
Smarce1O54941 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC3.79□□□□□ -1.8
Smarce1O54941 AC160016.1-201ENSMUST00000215589 448 ntBASIC3.79□□□□□ -1.8
Smarce1O54941 AC132465.3-201ENSMUST00000219326 195 ntBASIC3.79□□□□□ -1.8
Smarce1O54941 Gm2446-201ENSMUST00000220144 772 ntBASIC3.79□□□□□ -1.8
Smarce1O54941 Gm7753-201ENSMUST00000221007 867 ntBASIC3.79□□□□□ -1.8
Smarce1O54941 AC167977.1-201ENSMUST00000221384 234 ntBASIC3.79□□□□□ -1.8
Smarce1O54941 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC3.79□□□□□ -1.8
Smarce1O54941 AC138667.2-201ENSMUST00000224880 598 ntBASIC3.79□□□□□ -1.8
Smarce1O54941 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Smarce1O54941 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Smarce1O54941 Gm24490-201ENSMUST00000083803 98 ntBASIC3.79□□□□□ -1.8
Smarce1O54941 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.79□□□□□ -1.8
Smarce1O54941 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.79□□□□□ -1.8
Smarce1O54941 AC162910.1-201ENSMUST00000221219 1723 ntBASIC3.78□□□□□ -1.8
Smarce1O54941 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Smarce1O54941 Gm5362-201ENSMUST00000211968 3085 ntBASIC3.78□□□□□ -1.8
Smarce1O54941 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.78□□□□□ -1.8
Smarce1O54941 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
Smarce1O54941 Gm25563-201ENSMUST00000104603 74 ntBASIC3.78□□□□□ -1.8
Smarce1O54941 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Smarce1O54941 Gm11357-201ENSMUST00000119758 954 ntBASIC3.78□□□□□ -1.8
Smarce1O54941 Gm11438-201ENSMUST00000121582 189 ntBASIC3.78□□□□□ -1.8
Smarce1O54941 Gm24910-201ENSMUST00000157289 272 ntBASIC3.78□□□□□ -1.8
Smarce1O54941 Gm22390-201ENSMUST00000157588 325 ntBASIC3.78□□□□□ -1.8
Smarce1O54941 Gm26393-201ENSMUST00000157625 129 ntBASIC3.78□□□□□ -1.8
Smarce1O54941 Gm25519-201ENSMUST00000158392 127 ntBASIC3.78□□□□□ -1.8
Smarce1O54941 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC3.78□□□□□ -1.8
Smarce1O54941 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC3.78□□□□□ -1.8
Smarce1O54941 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC3.78□□□□□ -1.8
Smarce1O54941 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Smarce1O54941 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Smarce1O54941 Mir6385-201ENSMUST00000184295 105 ntBASIC3.78□□□□□ -1.8
Smarce1O54941 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC3.78□□□□□ -1.8
Smarce1O54941 Mir6933-201ENSMUST00000184982 81 ntBASIC3.78□□□□□ -1.8
Smarce1O54941 Gm5268-201ENSMUST00000189212 940 ntBASIC3.78□□□□□ -1.8
Smarce1O54941 Npn2-202ENSMUST00000189275 235 ntBASIC3.78□□□□□ -1.8
Smarce1O54941 Gm37641-201ENSMUST00000193837 239 ntBASIC3.78□□□□□ -1.8
Smarce1O54941 Gm37495-201ENSMUST00000194590 264 ntBASIC3.78□□□□□ -1.8
Smarce1O54941 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC3.78□□□□□ -1.8
Smarce1O54941 Gm5551-201ENSMUST00000199720 690 ntBASIC3.78□□□□□ -1.8
Smarce1O54941 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC3.78□□□□□ -1.8
Smarce1O54941 Gm10988-201ENSMUST00000209150 1088 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 95.3 ms