Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Gm29196-201ENSMUST00000189239 618 ntBASIC4.53□□□□□ -1.68
Trim55G3X8Y1 Gm28408-201ENSMUST00000191557 463 ntBASIC4.53□□□□□ -1.68
Trim55G3X8Y1 Gm34176-201ENSMUST00000192621 474 ntBASIC4.53□□□□□ -1.68
Trim55G3X8Y1 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC4.53□□□□□ -1.68
Trim55G3X8Y1 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC4.53□□□□□ -1.68
Trim55G3X8Y1 Gm44161-201ENSMUST00000203532 253 ntBASIC4.53□□□□□ -1.68
Trim55G3X8Y1 Gm45814-201ENSMUST00000212646 775 ntBASIC4.53□□□□□ -1.68
Trim55G3X8Y1 Gm23650-201ENSMUST00000083355 70 ntBASIC4.53□□□□□ -1.68
Trim55G3X8Y1 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
Trim55G3X8Y1 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Trim55G3X8Y1 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Trim55G3X8Y1 Gm37211-201ENSMUST00000193392 3433 ntBASIC4.53□□□□□ -1.68
Trim55G3X8Y1 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Trim55G3X8Y1 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
Trim55G3X8Y1 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Trim55G3X8Y1 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.52□□□□□ -1.69
Trim55G3X8Y1 Gm24429-201ENSMUST00000104076 132 ntBASIC4.52□□□□□ -1.69
Trim55G3X8Y1 Gm14622-201ENSMUST00000117117 468 ntBASIC4.52□□□□□ -1.69
Trim55G3X8Y1 Gm13046-201ENSMUST00000117391 501 ntBASIC4.52□□□□□ -1.69
Trim55G3X8Y1 Gm7164-201ENSMUST00000117503 450 ntBASIC4.52□□□□□ -1.69
Trim55G3X8Y1 Gm11790-201ENSMUST00000119569 455 ntBASIC4.52□□□□□ -1.69
Trim55G3X8Y1 Gm15106-201ENSMUST00000119691 821 ntBASIC4.52□□□□□ -1.69
Trim55G3X8Y1 Gm14852-201ENSMUST00000120065 647 ntBASIC4.52□□□□□ -1.69
Trim55G3X8Y1 Gm13867-201ENSMUST00000120844 395 ntBASIC4.52□□□□□ -1.69
Trim55G3X8Y1 Gm15167-201ENSMUST00000121997 187 ntBASIC4.52□□□□□ -1.69
Trim55G3X8Y1 Gm24385-201ENSMUST00000122694 350 ntBASIC4.52□□□□□ -1.69
Trim55G3X8Y1 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC4.52□□□□□ -1.69
Trim55G3X8Y1 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC4.52□□□□□ -1.69
Trim55G3X8Y1 Gm22891-201ENSMUST00000158641 164 ntBASIC4.52□□□□□ -1.69
Trim55G3X8Y1 Gm26468-201ENSMUST00000158644 106 ntBASIC4.52□□□□□ -1.69
Trim55G3X8Y1 Ear-ps12-201ENSMUST00000161720 451 ntBASIC4.52□□□□□ -1.69
Trim55G3X8Y1 Gm23415-201ENSMUST00000175519 83 ntBASIC4.52□□□□□ -1.69
Trim55G3X8Y1 Gm5372-201ENSMUST00000187540 409 ntBASIC4.52□□□□□ -1.69
Trim55G3X8Y1 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Trim55G3X8Y1 Gm2497-201ENSMUST00000189539 601 ntBASIC4.52□□□□□ -1.69
Trim55G3X8Y1 Gm28957-201ENSMUST00000190174 373 ntBASIC4.52□□□□□ -1.69
Trim55G3X8Y1 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC4.52□□□□□ -1.69
Trim55G3X8Y1 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC4.52□□□□□ -1.69
Trim55G3X8Y1 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Trim55G3X8Y1 Gm44336-201ENSMUST00000203696 468 ntBASIC4.52□□□□□ -1.69
Trim55G3X8Y1 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC4.52□□□□□ -1.69
Trim55G3X8Y1 AC158803.1-201ENSMUST00000219495 316 ntBASIC4.52□□□□□ -1.69
Trim55G3X8Y1 AC166341.3-201ENSMUST00000221861 114 ntBASIC4.52□□□□□ -1.69
Trim55G3X8Y1 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC4.52□□□□□ -1.69
Trim55G3X8Y1 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Trim55G3X8Y1 Gm22423-201ENSMUST00000082861 184 ntBASIC4.52□□□□□ -1.69
Trim55G3X8Y1 Gm22974-201ENSMUST00000083301 103 ntBASIC4.52□□□□□ -1.69
Trim55G3X8Y1 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Trim55G3X8Y1 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
Trim55G3X8Y1 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Trim55G3X8Y1 AC167420.1-201ENSMUST00000222999 2121 ntBASIC4.51□□□□□ -1.69
Trim55G3X8Y1 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Trim55G3X8Y1 Gm37668-201ENSMUST00000193745 1944 ntBASIC4.51□□□□□ -1.69
Trim55G3X8Y1 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Trim55G3X8Y1 Mir193b-201ENSMUST00000103784 79 ntBASIC4.51□□□□□ -1.69
Trim55G3X8Y1 Gm23274-201ENSMUST00000104056 130 ntBASIC4.51□□□□□ -1.69
Trim55G3X8Y1 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Trim55G3X8Y1 Gm14897-201ENSMUST00000118213 207 ntBASIC4.51□□□□□ -1.69
Trim55G3X8Y1 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC4.51□□□□□ -1.69
Trim55G3X8Y1 Gm13901-201ENSMUST00000137252 468 ntBASIC4.51□□□□□ -1.69
Trim55G3X8Y1 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC4.51□□□□□ -1.69
Trim55G3X8Y1 Gm3362-201ENSMUST00000148102 466 ntBASIC4.51□□□□□ -1.69
Trim55G3X8Y1 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Trim55G3X8Y1 Gm26278-201ENSMUST00000157098 132 ntBASIC4.51□□□□□ -1.69
Trim55G3X8Y1 Gm24409-201ENSMUST00000157881 152 ntBASIC4.51□□□□□ -1.69
Trim55G3X8Y1 Gm22312-201ENSMUST00000158005 130 ntBASIC4.51□□□□□ -1.69
Trim55G3X8Y1 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Trim55G3X8Y1 Gm26195-201ENSMUST00000175035 101 ntBASIC4.51□□□□□ -1.69
Trim55G3X8Y1 Mir6416-201ENSMUST00000183664 117 ntBASIC4.51□□□□□ -1.69
Trim55G3X8Y1 Mir7056-201ENSMUST00000183776 59 ntBASIC4.51□□□□□ -1.69
Trim55G3X8Y1 Mir7012-201ENSMUST00000183900 64 ntBASIC4.51□□□□□ -1.69
Trim55G3X8Y1 Gm27190-201ENSMUST00000184890 542 ntBASIC4.51□□□□□ -1.69
Trim55G3X8Y1 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Trim55G3X8Y1 Gm29330-201ENSMUST00000190032 699 ntBASIC4.51□□□□□ -1.69
Trim55G3X8Y1 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Trim55G3X8Y1 Gm37416-201ENSMUST00000193596 318 ntBASIC4.51□□□□□ -1.69
Trim55G3X8Y1 Gm28724-202ENSMUST00000194218 295 ntBASIC4.51□□□□□ -1.69
Trim55G3X8Y1 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC4.51□□□□□ -1.69
Trim55G3X8Y1 Gm18423-201ENSMUST00000205144 1074 ntBASIC4.51□□□□□ -1.69
Trim55G3X8Y1 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Trim55G3X8Y1 Snord21-201ENSMUST00000082519 94 ntBASIC4.51□□□□□ -1.69
Trim55G3X8Y1 Olfr713-201ENSMUST00000098139 975 ntBASIC4.51□□□□□ -1.69
Trim55G3X8Y1 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Trim55G3X8Y1 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Trim55G3X8Y1 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Trim55G3X8Y1 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Trim55G3X8Y1 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Trim55G3X8Y1 Gm7135-202ENSMUST00000191257 1905 ntBASIC4.5□□□□□ -1.69
Trim55G3X8Y1 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Trim55G3X8Y1 Snord116l9-201ENSMUST00000101891 94 ntBASIC4.5□□□□□ -1.69
Trim55G3X8Y1 Gm26504-201ENSMUST00000102033 94 ntBASIC4.5□□□□□ -1.69
Trim55G3X8Y1 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Trim55G3X8Y1 Gm12149-201ENSMUST00000117511 654 ntBASIC4.5□□□□□ -1.69
Trim55G3X8Y1 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC4.5□□□□□ -1.69
Trim55G3X8Y1 Gm15142-201ENSMUST00000121013 856 ntBASIC4.5□□□□□ -1.69
Trim55G3X8Y1 Gm5391-201ENSMUST00000121155 613 ntBASIC4.5□□□□□ -1.69
Trim55G3X8Y1 Gm25293-201ENSMUST00000122792 285 ntBASIC4.5□□□□□ -1.69
Trim55G3X8Y1 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC4.5□□□□□ -1.69
Trim55G3X8Y1 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC4.5□□□□□ -1.69
Trim55G3X8Y1 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC4.5□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms