Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC3.68□□□□□ -1.82
Pcdh9F8VPK8 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC3.68□□□□□ -1.82
Pcdh9F8VPK8 Gm43578-201ENSMUST00000201250 459 ntBASIC3.68□□□□□ -1.82
Pcdh9F8VPK8 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC3.68□□□□□ -1.82
Pcdh9F8VPK8 AC157017.2-201ENSMUST00000218354 777 ntBASIC3.68□□□□□ -1.82
Pcdh9F8VPK8 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.68□□□□□ -1.82
Pcdh9F8VPK8 AC131720.2-201ENSMUST00000220420 431 ntBASIC3.68□□□□□ -1.82
Pcdh9F8VPK8 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Pcdh9F8VPK8 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Pcdh9F8VPK8 CT030705.1-201ENSMUST00000223971 533 ntBASIC3.68□□□□□ -1.82
Pcdh9F8VPK8 AC158981.3-202ENSMUST00000228906 523 ntBASIC3.68□□□□□ -1.82
Pcdh9F8VPK8 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Pcdh9F8VPK8 Mir19a-201ENSMUST00000083482 82 ntBASIC3.68□□□□□ -1.82
Pcdh9F8VPK8 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Pcdh9F8VPK8 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Pcdh9F8VPK8 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.68□□□□□ -1.82
Pcdh9F8VPK8 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Pcdh9F8VPK8 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Pcdh9F8VPK8 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Pcdh9F8VPK8 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Pcdh9F8VPK8 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC3.67□□□□□ -1.82
Pcdh9F8VPK8 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
Pcdh9F8VPK8 Gm13803-201ENSMUST00000117547 489 ntBASIC3.67□□□□□ -1.82
Pcdh9F8VPK8 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC3.67□□□□□ -1.82
Pcdh9F8VPK8 Gm11625-201ENSMUST00000119535 296 ntBASIC3.67□□□□□ -1.82
Pcdh9F8VPK8 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC3.67□□□□□ -1.82
Pcdh9F8VPK8 Gm14810-201ENSMUST00000121628 486 ntBASIC3.67□□□□□ -1.82
Pcdh9F8VPK8 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC3.67□□□□□ -1.82
Pcdh9F8VPK8 Gm25427-201ENSMUST00000157605 103 ntBASIC3.67□□□□□ -1.82
Pcdh9F8VPK8 Gm25666-201ENSMUST00000157702 107 ntBASIC3.67□□□□□ -1.82
Pcdh9F8VPK8 Gm27903-201ENSMUST00000175482 126 ntBASIC3.67□□□□□ -1.82
Pcdh9F8VPK8 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC3.67□□□□□ -1.82
Pcdh9F8VPK8 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
Pcdh9F8VPK8 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC3.67□□□□□ -1.82
Pcdh9F8VPK8 Gm24968-201ENSMUST00000179817 107 ntBASIC3.67□□□□□ -1.82
Pcdh9F8VPK8 Gm27189-201ENSMUST00000184119 190 ntBASIC3.67□□□□□ -1.82
Pcdh9F8VPK8 Gm8151-201ENSMUST00000184817 871 ntBASIC3.67□□□□□ -1.82
Pcdh9F8VPK8 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Pcdh9F8VPK8 Gm37343-201ENSMUST00000192542 111 ntBASIC3.67□□□□□ -1.82
Pcdh9F8VPK8 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Pcdh9F8VPK8 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Pcdh9F8VPK8 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Pcdh9F8VPK8 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC3.67□□□□□ -1.82
Pcdh9F8VPK8 Gm44720-201ENSMUST00000206076 260 ntBASIC3.67□□□□□ -1.82
Pcdh9F8VPK8 AC125379.1-201ENSMUST00000221928 111 ntBASIC3.67□□□□□ -1.82
Pcdh9F8VPK8 AC126275.2-201ENSMUST00000225224 253 ntBASIC3.67□□□□□ -1.82
Pcdh9F8VPK8 AC154426.1-201ENSMUST00000225614 1132 ntBASIC3.67□□□□□ -1.82
Pcdh9F8VPK8 AC144819.1-201ENSMUST00000227015 620 ntBASIC3.67□□□□□ -1.82
Pcdh9F8VPK8 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Pcdh9F8VPK8 Gm26121-201ENSMUST00000083364 162 ntBASIC3.67□□□□□ -1.82
Pcdh9F8VPK8 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
Pcdh9F8VPK8 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.67□□□□□ -1.82
Pcdh9F8VPK8 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Pcdh9F8VPK8 Gm21379-201ENSMUST00000179772 1955 ntBASIC3.67□□□□□ -1.82
Pcdh9F8VPK8 AC126673.3-201ENSMUST00000223414 3829 ntBASIC3.67□□□□□ -1.82
Pcdh9F8VPK8 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Pcdh9F8VPK8 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Pcdh9F8VPK8 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Pcdh9F8VPK8 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.66□□□□□ -1.82
Pcdh9F8VPK8 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
Pcdh9F8VPK8 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Pcdh9F8VPK8 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Pcdh9F8VPK8 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Pcdh9F8VPK8 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Pcdh9F8VPK8 Gm24951-201ENSMUST00000102182 109 ntBASIC3.66□□□□□ -1.82
Pcdh9F8VPK8 Gm13804-201ENSMUST00000119552 172 ntBASIC3.66□□□□□ -1.82
Pcdh9F8VPK8 Gm14530-201ENSMUST00000122391 333 ntBASIC3.66□□□□□ -1.82
Pcdh9F8VPK8 Gm22480-201ENSMUST00000122568 128 ntBASIC3.66□□□□□ -1.82
Pcdh9F8VPK8 Gm24811-201ENSMUST00000175313 100 ntBASIC3.66□□□□□ -1.82
Pcdh9F8VPK8 Gm22716-201ENSMUST00000177596 107 ntBASIC3.66□□□□□ -1.82
Pcdh9F8VPK8 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Pcdh9F8VPK8 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Pcdh9F8VPK8 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC3.66□□□□□ -1.82
Pcdh9F8VPK8 Gm18291-201ENSMUST00000190791 301 ntBASIC3.66□□□□□ -1.82
Pcdh9F8VPK8 Gm38356-201ENSMUST00000194313 408 ntBASIC3.66□□□□□ -1.82
Pcdh9F8VPK8 Igkv2-105-201ENSMUST00000196931 377 ntBASIC3.66□□□□□ -1.82
Pcdh9F8VPK8 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC3.66□□□□□ -1.82
Pcdh9F8VPK8 Gm43007-201ENSMUST00000197618 291 ntBASIC3.66□□□□□ -1.82
Pcdh9F8VPK8 Gm45539-201ENSMUST00000210313 428 ntBASIC3.66□□□□□ -1.82
Pcdh9F8VPK8 Gm35558-203ENSMUST00000222264 204 ntBASIC3.66□□□□□ -1.82
Pcdh9F8VPK8 AC187103.4-202ENSMUST00000225091 230 ntBASIC3.66□□□□□ -1.82
Pcdh9F8VPK8 AC147633.1-201ENSMUST00000225134 259 ntBASIC3.66□□□□□ -1.82
Pcdh9F8VPK8 AC158392.2-201ENSMUST00000225402 969 ntBASIC3.66□□□□□ -1.82
Pcdh9F8VPK8 AC133176.1-201ENSMUST00000226668 219 ntBASIC3.66□□□□□ -1.82
Pcdh9F8VPK8 AC133189.2-201ENSMUST00000228527 392 ntBASIC3.66□□□□□ -1.82
Pcdh9F8VPK8 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Pcdh9F8VPK8 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Pcdh9F8VPK8 Gm25205-201ENSMUST00000082841 103 ntBASIC3.66□□□□□ -1.82
Pcdh9F8VPK8 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC3.66□□□□□ -1.82
Pcdh9F8VPK8 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Pcdh9F8VPK8 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
Pcdh9F8VPK8 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Pcdh9F8VPK8 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.66□□□□□ -1.82
Pcdh9F8VPK8 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Pcdh9F8VPK8 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Pcdh9F8VPK8 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Pcdh9F8VPK8 Gm37802-201ENSMUST00000194998 2643 ntBASIC3.65□□□□□ -1.82
Pcdh9F8VPK8 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC3.65□□□□□ -1.83
Pcdh9F8VPK8 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Pcdh9F8VPK8 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.65□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms