Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Clrn2B2RVW2 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Clrn2B2RVW2 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Clrn2B2RVW2 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Clrn2B2RVW2 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Clrn2B2RVW2 Gm1833-201ENSMUST00000191608 682 ntBASIC3.18□□□□□ -1.9
Clrn2B2RVW2 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Clrn2B2RVW2 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Clrn2B2RVW2 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Clrn2B2RVW2 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Clrn2B2RVW2 AC145736.1-201ENSMUST00000214661 479 ntBASIC3.18□□□□□ -1.9
Clrn2B2RVW2 Gm35262-201ENSMUST00000215133 267 ntBASIC3.18□□□□□ -1.9
Clrn2B2RVW2 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC3.18□□□□□ -1.9
Clrn2B2RVW2 AC154224.1-201ENSMUST00000224367 403 ntBASIC3.18□□□□□ -1.9
Clrn2B2RVW2 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
Clrn2B2RVW2 Snora23-201ENSMUST00000082517 184 ntBASIC3.18□□□□□ -1.9
Clrn2B2RVW2 Gm22005-201ENSMUST00000082795 141 ntBASIC3.18□□□□□ -1.9
Clrn2B2RVW2 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Clrn2B2RVW2 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.18□□□□□ -1.9
Clrn2B2RVW2 Gm14910-201ENSMUST00000121037 1805 ntBASIC3.18□□□□□ -1.9
Clrn2B2RVW2 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Clrn2B2RVW2 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Clrn2B2RVW2 AC154552.6-201ENSMUST00000221365 1342 ntBASIC3.18□□□□□ -1.9
Clrn2B2RVW2 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Clrn2B2RVW2 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Clrn2B2RVW2 Gm6207-201ENSMUST00000120075 1386 ntBASIC3.17□□□□□ -1.9
Clrn2B2RVW2 Gm6228-201ENSMUST00000178856 1386 ntBASIC3.17□□□□□ -1.9
Clrn2B2RVW2 AC169038.1-201ENSMUST00000227378 1352 ntBASIC3.17□□□□□ -1.9
Clrn2B2RVW2 AC117199.1-201ENSMUST00000219940 3132 ntBASIC3.17□□□□□ -1.9
Clrn2B2RVW2 Mir682-201ENSMUST00000102281 96 ntBASIC3.17□□□□□ -1.9
Clrn2B2RVW2 Gm23577-201ENSMUST00000103950 110 ntBASIC3.17□□□□□ -1.9
Clrn2B2RVW2 Gm26342-201ENSMUST00000104557 129 ntBASIC3.17□□□□□ -1.9
Clrn2B2RVW2 Gm25902-201ENSMUST00000158493 318 ntBASIC3.17□□□□□ -1.9
Clrn2B2RVW2 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
Clrn2B2RVW2 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
Clrn2B2RVW2 Gm22252-201ENSMUST00000179316 79 ntBASIC3.17□□□□□ -1.9
Clrn2B2RVW2 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Clrn2B2RVW2 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Clrn2B2RVW2 Gm37533-201ENSMUST00000193848 545 ntBASIC3.17□□□□□ -1.9
Clrn2B2RVW2 Gm8747-201ENSMUST00000195392 751 ntBASIC3.17□□□□□ -1.9
Clrn2B2RVW2 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Clrn2B2RVW2 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Clrn2B2RVW2 Gm6590-201ENSMUST00000203343 687 ntBASIC3.17□□□□□ -1.9
Clrn2B2RVW2 Gm44519-201ENSMUST00000206486 122 ntBASIC3.17□□□□□ -1.9
Clrn2B2RVW2 AC167977.1-201ENSMUST00000221384 234 ntBASIC3.17□□□□□ -1.9
Clrn2B2RVW2 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Clrn2B2RVW2 Gm18300-201ENSMUST00000192792 1406 ntBASIC3.17□□□□□ -1.9
Clrn2B2RVW2 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Clrn2B2RVW2 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Clrn2B2RVW2 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
Clrn2B2RVW2 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Clrn2B2RVW2 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Clrn2B2RVW2 Gm14677-201ENSMUST00000117866 486 ntBASIC3.16□□□□□ -1.9
Clrn2B2RVW2 Gm15399-201ENSMUST00000118055 724 ntBASIC3.16□□□□□ -1.9
Clrn2B2RVW2 Mup-ps12-201ENSMUST00000126217 549 ntBASIC3.16□□□□□ -1.9
Clrn2B2RVW2 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
Clrn2B2RVW2 Gm22776-201ENSMUST00000178634 94 ntBASIC3.16□□□□□ -1.9
Clrn2B2RVW2 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC3.16□□□□□ -1.9
Clrn2B2RVW2 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC3.16□□□□□ -1.9
Clrn2B2RVW2 Gm23767-201ENSMUST00000179278 94 ntBASIC3.16□□□□□ -1.9
Clrn2B2RVW2 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC3.16□□□□□ -1.9
Clrn2B2RVW2 Trbv12-3-201ENSMUST00000192675 372 ntBASIC3.16□□□□□ -1.9
Clrn2B2RVW2 Gm18660-201ENSMUST00000199542 629 ntBASIC3.16□□□□□ -1.9
Clrn2B2RVW2 Gm9373-201ENSMUST00000208724 599 ntBASIC3.16□□□□□ -1.9
Clrn2B2RVW2 Gm45551-201ENSMUST00000211459 928 ntBASIC3.16□□□□□ -1.9
Clrn2B2RVW2 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC3.16□□□□□ -1.9
Clrn2B2RVW2 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Clrn2B2RVW2 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC3.16□□□□□ -1.9
Clrn2B2RVW2 AC154329.2-201ENSMUST00000225257 383 ntBASIC3.16□□□□□ -1.9
Clrn2B2RVW2 Gm4017-201ENSMUST00000084813 338 ntBASIC3.16□□□□□ -1.9
Clrn2B2RVW2 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC3.16□□□□□ -1.9
Clrn2B2RVW2 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Clrn2B2RVW2 Gm16436-201ENSMUST00000121510 1607 ntBASIC3.15□□□□□ -1.9
Clrn2B2RVW2 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.9
Clrn2B2RVW2 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
Clrn2B2RVW2 Gm5583-201ENSMUST00000174328 1519 ntBASIC3.15□□□□□ -1.9
Clrn2B2RVW2 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Clrn2B2RVW2 Gm8569-201ENSMUST00000117630 647 ntBASIC3.15□□□□□ -1.91
Clrn2B2RVW2 Gm13349-201ENSMUST00000118436 411 ntBASIC3.15□□□□□ -1.91
Clrn2B2RVW2 Gm23213-201ENSMUST00000122715 313 ntBASIC3.15□□□□□ -1.91
Clrn2B2RVW2 Gm22026-201ENSMUST00000122735 281 ntBASIC3.15□□□□□ -1.91
Clrn2B2RVW2 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC3.15□□□□□ -1.91
Clrn2B2RVW2 Gm43096-201ENSMUST00000196173 421 ntBASIC3.15□□□□□ -1.91
Clrn2B2RVW2 Crs-ps-201ENSMUST00000203723 760 ntBASIC3.15□□□□□ -1.91
Clrn2B2RVW2 Gm45742-201ENSMUST00000212400 433 ntBASIC3.15□□□□□ -1.91
Clrn2B2RVW2 Gm18892-201ENSMUST00000217628 881 ntBASIC3.15□□□□□ -1.91
Clrn2B2RVW2 AC133654.1-201ENSMUST00000228411 672 ntBASIC3.15□□□□□ -1.91
Clrn2B2RVW2 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Clrn2B2RVW2 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Clrn2B2RVW2 Olfr1193-201ENSMUST00000081697 957 ntBASIC3.15□□□□□ -1.91
Clrn2B2RVW2 Gm22622-201ENSMUST00000082870 129 ntBASIC3.15□□□□□ -1.91
Clrn2B2RVW2 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
Clrn2B2RVW2 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Clrn2B2RVW2 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Clrn2B2RVW2 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Clrn2B2RVW2 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Clrn2B2RVW2 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Clrn2B2RVW2 Gm24670-201ENSMUST00000104154 132 ntBASIC3.14□□□□□ -1.91
Clrn2B2RVW2 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC3.14□□□□□ -1.91
Clrn2B2RVW2 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 134.2 ms