Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm37402-201ENSMUST00000194525 5000 ntBASIC1.73□□□□□ -2.13
Col6a4A2AX52 Gm42659-201ENSMUST00000196955 1754 ntBASIC1.73□□□□□ -2.13
Col6a4A2AX52 Mir147-201ENSMUST00000102354 79 ntBASIC1.72□□□□□ -2.13
Col6a4A2AX52 Snord65-201ENSMUST00000104269 72 ntBASIC1.72□□□□□ -2.13
Col6a4A2AX52 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Col6a4A2AX52 Gm25966-201ENSMUST00000157169 117 ntBASIC1.72□□□□□ -2.13
Col6a4A2AX52 Gm23152-201ENSMUST00000175322 116 ntBASIC1.72□□□□□ -2.13
Col6a4A2AX52 Mir6352-201ENSMUST00000184495 116 ntBASIC1.72□□□□□ -2.13
Col6a4A2AX52 Gm29281-201ENSMUST00000188077 381 ntBASIC1.72□□□□□ -2.13
Col6a4A2AX52 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
Col6a4A2AX52 Gm7407-201ENSMUST00000208301 568 ntBASIC1.72□□□□□ -2.13
Col6a4A2AX52 AC154828.2-201ENSMUST00000220908 1070 ntBASIC1.72□□□□□ -2.13
Col6a4A2AX52 AC132260.2-201ENSMUST00000224482 344 ntBASIC1.72□□□□□ -2.13
Col6a4A2AX52 AC125350.4-201ENSMUST00000225895 273 ntBASIC1.72□□□□□ -2.13
Col6a4A2AX52 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
Col6a4A2AX52 Gm14421-201ENSMUST00000121755 1958 ntBASIC1.72□□□□□ -2.13
Col6a4A2AX52 Gm15714-201ENSMUST00000117168 250 ntBASIC1.72□□□□□ -2.13
Col6a4A2AX52 Gm11433-201ENSMUST00000118318 228 ntBASIC1.72□□□□□ -2.13
Col6a4A2AX52 Gm8080-201ENSMUST00000122046 1155 ntBASIC1.72□□□□□ -2.13
Col6a4A2AX52 Gm23467-201ENSMUST00000157127 159 ntBASIC1.72□□□□□ -2.13
Col6a4A2AX52 Gm23599-201ENSMUST00000157261 251 ntBASIC1.72□□□□□ -2.13
Col6a4A2AX52 Gm26001-201ENSMUST00000157989 103 ntBASIC1.72□□□□□ -2.13
Col6a4A2AX52 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Col6a4A2AX52 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC1.72□□□□□ -2.13
Col6a4A2AX52 Gm25069-201ENSMUST00000175238 86 ntBASIC1.72□□□□□ -2.13
Col6a4A2AX52 Gm27580-201ENSMUST00000183666 149 ntBASIC1.72□□□□□ -2.13
Col6a4A2AX52 Gm27330-201ENSMUST00000184689 132 ntBASIC1.72□□□□□ -2.13
Col6a4A2AX52 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC1.72□□□□□ -2.13
Col6a4A2AX52 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Col6a4A2AX52 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Col6a4A2AX52 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC1.71□□□□□ -2.13
Col6a4A2AX52 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.71□□□□□ -2.14
Col6a4A2AX52 Gm13366-201ENSMUST00000122198 970 ntBASIC1.71□□□□□ -2.14
Col6a4A2AX52 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
Col6a4A2AX52 Gm27753-201ENSMUST00000184742 203 ntBASIC1.71□□□□□ -2.14
Col6a4A2AX52 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC1.71□□□□□ -2.14
Col6a4A2AX52 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC1.71□□□□□ -2.14
Col6a4A2AX52 Gm18899-201ENSMUST00000217663 546 ntBASIC1.71□□□□□ -2.14
Col6a4A2AX52 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC1.71□□□□□ -2.14
Col6a4A2AX52 AC164424.1-201ENSMUST00000221690 170 ntBASIC1.71□□□□□ -2.14
Col6a4A2AX52 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
Col6a4A2AX52 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Col6a4A2AX52 Gm37303-201ENSMUST00000194202 1559 ntBASIC1.71□□□□□ -2.14
Col6a4A2AX52 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC1.71□□□□□ -2.14
Col6a4A2AX52 Gm14579-201ENSMUST00000117068 283 ntBASIC1.71□□□□□ -2.14
Col6a4A2AX52 Mup-ps21-201ENSMUST00000119998 448 ntBASIC1.71□□□□□ -2.14
Col6a4A2AX52 Gm24475-201ENSMUST00000157435 143 ntBASIC1.71□□□□□ -2.14
Col6a4A2AX52 Gm24857-201ENSMUST00000158061 310 ntBASIC1.71□□□□□ -2.14
Col6a4A2AX52 Gm24771-201ENSMUST00000158508 137 ntBASIC1.71□□□□□ -2.14
Col6a4A2AX52 Gm3489-201ENSMUST00000190083 528 ntBASIC1.71□□□□□ -2.14
Col6a4A2AX52 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC1.71□□□□□ -2.14
Col6a4A2AX52 AC140254.1-201ENSMUST00000220063 331 ntBASIC1.71□□□□□ -2.14
Col6a4A2AX52 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
Col6a4A2AX52 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
Col6a4A2AX52 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Col6a4A2AX52 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Col6a4A2AX52 BC022960-201ENSMUST00000119987 1815 ntBASIC1.7□□□□□ -2.14
Col6a4A2AX52 Gm15157-201ENSMUST00000121852 702 ntBASIC1.7□□□□□ -2.14
Col6a4A2AX52 Gm11344-201ENSMUST00000122011 335 ntBASIC1.7□□□□□ -2.14
Col6a4A2AX52 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC1.7□□□□□ -2.14
Col6a4A2AX52 Gm15900-201ENSMUST00000161584 342 ntBASIC1.7□□□□□ -2.14
Col6a4A2AX52 Gm8224-201ENSMUST00000166178 497 ntBASIC1.7□□□□□ -2.14
Col6a4A2AX52 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC1.7□□□□□ -2.14
Col6a4A2AX52 Gm10074-201ENSMUST00000174543 249 ntBASIC1.7□□□□□ -2.14
Col6a4A2AX52 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC1.7□□□□□ -2.14
Col6a4A2AX52 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC1.7□□□□□ -2.14
Col6a4A2AX52 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC1.7□□□□□ -2.14
Col6a4A2AX52 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC1.7□□□□□ -2.14
Col6a4A2AX52 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC1.7□□□□□ -2.14
Col6a4A2AX52 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC1.7□□□□□ -2.14
Col6a4A2AX52 Gm7675-201ENSMUST00000208828 686 ntBASIC1.7□□□□□ -2.14
Col6a4A2AX52 AC161250.1-201ENSMUST00000213426 1111 ntBASIC1.7□□□□□ -2.14
Col6a4A2AX52 AC153532.1-201ENSMUST00000218126 1111 ntBASIC1.7□□□□□ -2.14
Col6a4A2AX52 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC1.7□□□□□ -2.14
Col6a4A2AX52 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Col6a4A2AX52 Gm24919-201ENSMUST00000083020 106 ntBASIC1.7□□□□□ -2.14
Col6a4A2AX52 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC1.7□□□□□ -2.14
Col6a4A2AX52 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Col6a4A2AX52 AC154681.1-201ENSMUST00000225876 1735 ntBASIC1.7□□□□□ -2.14
Col6a4A2AX52 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Col6a4A2AX52 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Col6a4A2AX52 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Col6a4A2AX52 Gm9496-201ENSMUST00000191295 1601 ntBASIC1.7□□□□□ -2.14
Col6a4A2AX52 Gm25883-201ENSMUST00000157781 271 ntBASIC1.69□□□□□ -2.14
Col6a4A2AX52 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC1.69□□□□□ -2.14
Col6a4A2AX52 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC1.69□□□□□ -2.14
Col6a4A2AX52 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC1.69□□□□□ -2.14
Col6a4A2AX52 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Col6a4A2AX52 Mir200b-201ENSMUST00000083615 70 ntBASIC1.69□□□□□ -2.14
Col6a4A2AX52 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Col6a4A2AX52 AC132221.1-201ENSMUST00000220577 3841 ntBASIC1.69□□□□□ -2.14
Col6a4A2AX52 Gm12814-201ENSMUST00000117091 846 ntBASIC1.69□□□□□ -2.14
Col6a4A2AX52 Gm14791-201ENSMUST00000119061 1166 ntBASIC1.69□□□□□ -2.14
Col6a4A2AX52 Gm22093-201ENSMUST00000158980 111 ntBASIC1.69□□□□□ -2.14
Col6a4A2AX52 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC1.69□□□□□ -2.14
Col6a4A2AX52 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Col6a4A2AX52 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Col6a4A2AX52 Gm26238-201ENSMUST00000175538 117 ntBASIC1.69□□□□□ -2.14
Col6a4A2AX52 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC1.69□□□□□ -2.14
Col6a4A2AX52 Gm38214-201ENSMUST00000192581 988 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms