Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm43498-201ENSMUST00000202002 1486 ntBASIC3.04□□□□□ -1.92
H2afb2S4R1M3 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
H2afb2S4R1M3 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
H2afb2S4R1M3 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
H2afb2S4R1M3 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC3.04□□□□□ -1.92
H2afb2S4R1M3 Gm7974-201ENSMUST00000117154 408 ntBASIC3.04□□□□□ -1.92
H2afb2S4R1M3 Gm14899-201ENSMUST00000118673 548 ntBASIC3.04□□□□□ -1.92
H2afb2S4R1M3 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC3.04□□□□□ -1.92
H2afb2S4R1M3 Gm16363-201ENSMUST00000132460 877 ntBASIC3.04□□□□□ -1.92
H2afb2S4R1M3 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC3.04□□□□□ -1.92
H2afb2S4R1M3 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC3.04□□□□□ -1.92
H2afb2S4R1M3 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
H2afb2S4R1M3 Gm24061-201ENSMUST00000157489 120 ntBASIC3.04□□□□□ -1.92
H2afb2S4R1M3 Gm22961-201ENSMUST00000157964 106 ntBASIC3.04□□□□□ -1.92
H2afb2S4R1M3 Gm24730-201ENSMUST00000158228 117 ntBASIC3.04□□□□□ -1.92
H2afb2S4R1M3 Gm2855-201ENSMUST00000166765 456 ntBASIC3.04□□□□□ -1.92
H2afb2S4R1M3 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
H2afb2S4R1M3 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC3.04□□□□□ -1.92
H2afb2S4R1M3 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
H2afb2S4R1M3 Mir6408-201ENSMUST00000183643 91 ntBASIC3.04□□□□□ -1.92
H2afb2S4R1M3 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
H2afb2S4R1M3 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC3.04□□□□□ -1.92
H2afb2S4R1M3 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
H2afb2S4R1M3 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
H2afb2S4R1M3 Gm37428-201ENSMUST00000193886 137 ntBASIC3.04□□□□□ -1.92
H2afb2S4R1M3 Gm18691-201ENSMUST00000203593 872 ntBASIC3.04□□□□□ -1.92
H2afb2S4R1M3 Gm45658-201ENSMUST00000209197 580 ntBASIC3.04□□□□□ -1.92
H2afb2S4R1M3 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC3.04□□□□□ -1.92
H2afb2S4R1M3 AL669916.5-201ENSMUST00000214874 361 ntBASIC3.04□□□□□ -1.92
H2afb2S4R1M3 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC3.04□□□□□ -1.92
H2afb2S4R1M3 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
H2afb2S4R1M3 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
H2afb2S4R1M3 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
H2afb2S4R1M3 Gm5265-201ENSMUST00000076828 342 ntBASIC3.04□□□□□ -1.92
H2afb2S4R1M3 n-R5s79-201ENSMUST00000083071 120 ntBASIC3.04□□□□□ -1.92
H2afb2S4R1M3 Gm26121-201ENSMUST00000083364 162 ntBASIC3.04□□□□□ -1.92
H2afb2S4R1M3 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
H2afb2S4R1M3 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
H2afb2S4R1M3 Gm8473-201ENSMUST00000176697 1885 ntBASIC3.04□□□□□ -1.92
H2afb2S4R1M3 Gm15302-201ENSMUST00000117779 2630 ntBASIC3.03□□□□□ -1.92
H2afb2S4R1M3 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
H2afb2S4R1M3 Gm24890-201ENSMUST00000104389 102 ntBASIC3.03□□□□□ -1.92
H2afb2S4R1M3 Gm11358-201ENSMUST00000122310 373 ntBASIC3.03□□□□□ -1.92
H2afb2S4R1M3 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC3.03□□□□□ -1.92
H2afb2S4R1M3 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC3.03□□□□□ -1.92
H2afb2S4R1M3 Gm7346-201ENSMUST00000169661 476 ntBASIC3.03□□□□□ -1.92
H2afb2S4R1M3 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.03□□□□□ -1.92
H2afb2S4R1M3 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC3.03□□□□□ -1.92
H2afb2S4R1M3 Gm26297-201ENSMUST00000179464 132 ntBASIC3.03□□□□□ -1.92
H2afb2S4R1M3 Gm22307-201ENSMUST00000180019 107 ntBASIC3.03□□□□□ -1.92
H2afb2S4R1M3 Gm25873-201ENSMUST00000180317 107 ntBASIC3.03□□□□□ -1.92
H2afb2S4R1M3 Gm26928-201ENSMUST00000182674 572 ntBASIC3.03□□□□□ -1.92
H2afb2S4R1M3 Gm6445-201ENSMUST00000189515 1112 ntBASIC3.03□□□□□ -1.92
H2afb2S4R1M3 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC3.03□□□□□ -1.92
H2afb2S4R1M3 Gm5731-201ENSMUST00000190969 481 ntBASIC3.03□□□□□ -1.92
H2afb2S4R1M3 Ighv1-40-201ENSMUST00000194231 345 ntBASIC3.03□□□□□ -1.92
H2afb2S4R1M3 Gm43582-201ENSMUST00000196149 343 ntBASIC3.03□□□□□ -1.92
H2afb2S4R1M3 Gm43384-201ENSMUST00000200569 637 ntBASIC3.03□□□□□ -1.92
H2afb2S4R1M3 Gm43198-201ENSMUST00000200927 326 ntBASIC3.03□□□□□ -1.92
H2afb2S4R1M3 Gm44181-201ENSMUST00000203106 483 ntBASIC3.03□□□□□ -1.92
H2afb2S4R1M3 Gm44449-201ENSMUST00000203610 153 ntBASIC3.03□□□□□ -1.92
H2afb2S4R1M3 Gm44254-201ENSMUST00000204184 322 ntBASIC3.03□□□□□ -1.92
H2afb2S4R1M3 Gm43932-201ENSMUST00000204499 52 ntBASIC3.03□□□□□ -1.92
H2afb2S4R1M3 Gm44118-201ENSMUST00000204665 229 ntBASIC3.03□□□□□ -1.92
H2afb2S4R1M3 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC3.03□□□□□ -1.92
H2afb2S4R1M3 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC3.03□□□□□ -1.92
H2afb2S4R1M3 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC3.03□□□□□ -1.92
H2afb2S4R1M3 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC3.03□□□□□ -1.92
H2afb2S4R1M3 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC3.03□□□□□ -1.92
H2afb2S4R1M3 AC121966.1-201ENSMUST00000221458 282 ntBASIC3.03□□□□□ -1.92
H2afb2S4R1M3 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC3.03□□□□□ -1.92
H2afb2S4R1M3 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.03□□□□□ -1.92
H2afb2S4R1M3 AC115878.1-201ENSMUST00000227247 334 ntBASIC3.03□□□□□ -1.92
H2afb2S4R1M3 Gm23738-201ENSMUST00000082828 171 ntBASIC3.03□□□□□ -1.92
H2afb2S4R1M3 Gm23939-201ENSMUST00000082880 133 ntBASIC3.03□□□□□ -1.92
H2afb2S4R1M3 Mir184-201ENSMUST00000083662 69 ntBASIC3.03□□□□□ -1.92
H2afb2S4R1M3 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
H2afb2S4R1M3 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC3.03□□□□□ -1.92
H2afb2S4R1M3 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
H2afb2S4R1M3 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.02□□□□□ -1.93
H2afb2S4R1M3 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3.02□□□□□ -1.93
H2afb2S4R1M3 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
H2afb2S4R1M3 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC3.02□□□□□ -1.93
H2afb2S4R1M3 Gm11991-201ENSMUST00000119652 1074 ntBASIC3.02□□□□□ -1.93
H2afb2S4R1M3 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.02□□□□□ -1.93
H2afb2S4R1M3 Gm12096-201ENSMUST00000121149 829 ntBASIC3.02□□□□□ -1.93
H2afb2S4R1M3 Defa-ps5-201ENSMUST00000121541 279 ntBASIC3.02□□□□□ -1.93
H2afb2S4R1M3 Gm12693-201ENSMUST00000121965 483 ntBASIC3.02□□□□□ -1.93
H2afb2S4R1M3 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
H2afb2S4R1M3 Gm24060-201ENSMUST00000157494 95 ntBASIC3.02□□□□□ -1.93
H2afb2S4R1M3 Gm24314-201ENSMUST00000158274 123 ntBASIC3.02□□□□□ -1.93
H2afb2S4R1M3 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC3.02□□□□□ -1.93
H2afb2S4R1M3 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC3.02□□□□□ -1.93
H2afb2S4R1M3 Gm25874-201ENSMUST00000178030 79 ntBASIC3.02□□□□□ -1.93
H2afb2S4R1M3 Gm27783-201ENSMUST00000183534 105 ntBASIC3.02□□□□□ -1.93
H2afb2S4R1M3 Gm27861-201ENSMUST00000183920 214 ntBASIC3.02□□□□□ -1.93
H2afb2S4R1M3 Gm17929-201ENSMUST00000186851 627 ntBASIC3.02□□□□□ -1.93
H2afb2S4R1M3 Gm5268-201ENSMUST00000189212 940 ntBASIC3.02□□□□□ -1.93
H2afb2S4R1M3 Gm28648-201ENSMUST00000190092 343 ntBASIC3.02□□□□□ -1.93
H2afb2S4R1M3 Gm28552-201ENSMUST00000190725 388 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 96.2 ms