Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
H2afb1S4R1E0 Gm44294-201ENSMUST00000205090 728 ntBASIC3.11□□□□□ -1.91
H2afb1S4R1E0 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC3.11□□□□□ -1.91
H2afb1S4R1E0 AC153971.2-201ENSMUST00000214553 777 ntBASIC3.11□□□□□ -1.91
H2afb1S4R1E0 Gm7119-201ENSMUST00000221345 695 ntBASIC3.11□□□□□ -1.91
H2afb1S4R1E0 Gm46369-201ENSMUST00000221577 401 ntBASIC3.11□□□□□ -1.91
H2afb1S4R1E0 AC124569.4-201ENSMUST00000223830 1220 ntBASIC3.11□□□□□ -1.91
H2afb1S4R1E0 AC144819.1-201ENSMUST00000227015 620 ntBASIC3.11□□□□□ -1.91
H2afb1S4R1E0 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
H2afb1S4R1E0 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC3.11□□□□□ -1.91
H2afb1S4R1E0 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
H2afb1S4R1E0 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC3.11□□□□□ -1.91
H2afb1S4R1E0 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
H2afb1S4R1E0 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
H2afb1S4R1E0 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
H2afb1S4R1E0 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
H2afb1S4R1E0 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3.1□□□□□ -1.91
H2afb1S4R1E0 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.1□□□□□ -1.91
H2afb1S4R1E0 Gm44120-201ENSMUST00000203022 3023 ntBASIC3.1□□□□□ -1.91
H2afb1S4R1E0 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
H2afb1S4R1E0 Mir19b-1-201ENSMUST00000102301 87 ntBASIC3.1□□□□□ -1.91
H2afb1S4R1E0 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
H2afb1S4R1E0 Mir193b-201ENSMUST00000103784 79 ntBASIC3.1□□□□□ -1.91
H2afb1S4R1E0 Gm22771-201ENSMUST00000104449 91 ntBASIC3.1□□□□□ -1.91
H2afb1S4R1E0 Gm26145-201ENSMUST00000104476 127 ntBASIC3.1□□□□□ -1.91
H2afb1S4R1E0 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
H2afb1S4R1E0 Gm14469-201ENSMUST00000118363 202 ntBASIC3.1□□□□□ -1.91
H2afb1S4R1E0 Gm23118-201ENSMUST00000122657 187 ntBASIC3.1□□□□□ -1.91
H2afb1S4R1E0 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC3.1□□□□□ -1.91
H2afb1S4R1E0 Gm25967-201ENSMUST00000157168 147 ntBASIC3.1□□□□□ -1.91
H2afb1S4R1E0 Gm22793-201ENSMUST00000157227 330 ntBASIC3.1□□□□□ -1.91
H2afb1S4R1E0 Gm22310-201ENSMUST00000157509 116 ntBASIC3.1□□□□□ -1.91
H2afb1S4R1E0 Gm23022-201ENSMUST00000158768 180 ntBASIC3.1□□□□□ -1.91
H2afb1S4R1E0 Gm23473-201ENSMUST00000158883 116 ntBASIC3.1□□□□□ -1.91
H2afb1S4R1E0 Gm23775-201ENSMUST00000158991 249 ntBASIC3.1□□□□□ -1.91
H2afb1S4R1E0 Snord116l12-201ENSMUST00000179816 94 ntBASIC3.1□□□□□ -1.91
H2afb1S4R1E0 Mir669a-7-201ENSMUST00000180364 87 ntBASIC3.1□□□□□ -1.91
H2afb1S4R1E0 Mir6963-201ENSMUST00000183535 71 ntBASIC3.1□□□□□ -1.91
H2afb1S4R1E0 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC3.1□□□□□ -1.91
H2afb1S4R1E0 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC3.1□□□□□ -1.91
H2afb1S4R1E0 Gm37817-201ENSMUST00000195276 434 ntBASIC3.1□□□□□ -1.91
H2afb1S4R1E0 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
H2afb1S4R1E0 Mir669a-6-201ENSMUST00000196127 87 ntBASIC3.1□□□□□ -1.91
H2afb1S4R1E0 Gm9379-201ENSMUST00000196790 646 ntBASIC3.1□□□□□ -1.91
H2afb1S4R1E0 Mir669a-12-201ENSMUST00000197274 87 ntBASIC3.1□□□□□ -1.91
H2afb1S4R1E0 Mir669a-5-201ENSMUST00000197439 87 ntBASIC3.1□□□□□ -1.91
H2afb1S4R1E0 Mir669a-10-201ENSMUST00000197745 87 ntBASIC3.1□□□□□ -1.91
H2afb1S4R1E0 Mir669a-11-201ENSMUST00000197952 87 ntBASIC3.1□□□□□ -1.91
H2afb1S4R1E0 Mir669a-4-201ENSMUST00000198665 87 ntBASIC3.1□□□□□ -1.91
H2afb1S4R1E0 Mir669a-9-201ENSMUST00000200087 87 ntBASIC3.1□□□□□ -1.91
H2afb1S4R1E0 Mir669a-8-201ENSMUST00000200268 87 ntBASIC3.1□□□□□ -1.91
H2afb1S4R1E0 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC3.1□□□□□ -1.91
H2afb1S4R1E0 Gm7946-201ENSMUST00000203326 958 ntBASIC3.1□□□□□ -1.91
H2afb1S4R1E0 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC3.1□□□□□ -1.91
H2afb1S4R1E0 Gm45539-201ENSMUST00000210313 428 ntBASIC3.1□□□□□ -1.91
H2afb1S4R1E0 Gm31849-201ENSMUST00000220306 375 ntBASIC3.1□□□□□ -1.91
H2afb1S4R1E0 AC132315.1-201ENSMUST00000221771 390 ntBASIC3.1□□□□□ -1.91
H2afb1S4R1E0 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
H2afb1S4R1E0 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
H2afb1S4R1E0 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
H2afb1S4R1E0 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
H2afb1S4R1E0 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
H2afb1S4R1E0 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
H2afb1S4R1E0 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.1□□□□□ -1.91
H2afb1S4R1E0 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
H2afb1S4R1E0 Gm11284-201ENSMUST00000121910 1887 ntBASIC3.09□□□□□ -1.91
H2afb1S4R1E0 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.09□□□□□ -1.91
H2afb1S4R1E0 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
H2afb1S4R1E0 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
H2afb1S4R1E0 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
H2afb1S4R1E0 Gm25773-201ENSMUST00000116718 127 ntBASIC3.09□□□□□ -1.91
H2afb1S4R1E0 Gm14880-201ENSMUST00000117581 292 ntBASIC3.09□□□□□ -1.91
H2afb1S4R1E0 Gm15094-201ENSMUST00000118394 1131 ntBASIC3.09□□□□□ -1.91
H2afb1S4R1E0 Gm15268-201ENSMUST00000118845 352 ntBASIC3.09□□□□□ -1.91
H2afb1S4R1E0 Gm15014-201ENSMUST00000120742 258 ntBASIC3.09□□□□□ -1.91
H2afb1S4R1E0 Gm24836-201ENSMUST00000122609 108 ntBASIC3.09□□□□□ -1.91
H2afb1S4R1E0 Gm22026-201ENSMUST00000122735 281 ntBASIC3.09□□□□□ -1.91
H2afb1S4R1E0 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
H2afb1S4R1E0 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
H2afb1S4R1E0 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
H2afb1S4R1E0 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
H2afb1S4R1E0 Gm24520-201ENSMUST00000179510 110 ntBASIC3.09□□□□□ -1.91
H2afb1S4R1E0 Gm24968-201ENSMUST00000179817 107 ntBASIC3.09□□□□□ -1.91
H2afb1S4R1E0 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC3.09□□□□□ -1.91
H2afb1S4R1E0 Gm28666-201ENSMUST00000186649 274 ntBASIC3.09□□□□□ -1.91
H2afb1S4R1E0 Gm28489-201ENSMUST00000186655 316 ntBASIC3.09□□□□□ -1.91
H2afb1S4R1E0 Gm29064-201ENSMUST00000187014 813 ntBASIC3.09□□□□□ -1.91
H2afb1S4R1E0 Gm38329-201ENSMUST00000193473 427 ntBASIC3.09□□□□□ -1.91
H2afb1S4R1E0 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.09□□□□□ -1.91
H2afb1S4R1E0 Gm45316-201ENSMUST00000210128 162 ntBASIC3.09□□□□□ -1.91
H2afb1S4R1E0 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC3.09□□□□□ -1.91
H2afb1S4R1E0 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC3.09□□□□□ -1.91
H2afb1S4R1E0 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC3.09□□□□□ -1.91
H2afb1S4R1E0 Gm46194-201ENSMUST00000218136 320 ntBASIC3.09□□□□□ -1.91
H2afb1S4R1E0 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC3.09□□□□□ -1.91
H2afb1S4R1E0 Gm7753-201ENSMUST00000221007 867 ntBASIC3.09□□□□□ -1.91
H2afb1S4R1E0 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC3.09□□□□□ -1.91
H2afb1S4R1E0 Gm19563-201ENSMUST00000222031 270 ntBASIC3.09□□□□□ -1.91
H2afb1S4R1E0 AC140344.1-201ENSMUST00000223384 387 ntBASIC3.09□□□□□ -1.91
H2afb1S4R1E0 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms