Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC5.1□□□□□ -1.59
Nubp1Q9R060 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Nubp1Q9R060 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Nubp1Q9R060 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Nubp1Q9R060 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC5.1□□□□□ -1.59
Nubp1Q9R060 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Nubp1Q9R060 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
Nubp1Q9R060 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Nubp1Q9R060 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Nubp1Q9R060 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Nubp1Q9R060 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Nubp1Q9R060 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Nubp1Q9R060 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Nubp1Q9R060 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Nubp1Q9R060 Gm38073-201ENSMUST00000195141 3665 ntBASIC5.09□□□□□ -1.59
Nubp1Q9R060 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Nubp1Q9R060 AC124569.3-201ENSMUST00000224860 1621 ntBASIC5.09□□□□□ -1.59
Nubp1Q9R060 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Nubp1Q9R060 Gm37180-201ENSMUST00000195335 2819 ntBASIC5.09□□□□□ -1.59
Nubp1Q9R060 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Nubp1Q9R060 Gm42781-201ENSMUST00000201317 2719 ntBASIC5.09□□□□□ -1.59
Nubp1Q9R060 AC154634.4-201ENSMUST00000226077 2665 ntBASIC5.09□□□□□ -1.59
Nubp1Q9R060 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Nubp1Q9R060 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Nubp1Q9R060 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Nubp1Q9R060 Gm12062-201ENSMUST00000117533 259 ntBASIC5.09□□□□□ -1.59
Nubp1Q9R060 Gm13992-201ENSMUST00000120558 156 ntBASIC5.09□□□□□ -1.59
Nubp1Q9R060 Gm14845-201ENSMUST00000121259 306 ntBASIC5.09□□□□□ -1.59
Nubp1Q9R060 Gm11677-201ENSMUST00000121349 977 ntBASIC5.09□□□□□ -1.59
Nubp1Q9R060 Gm22613-201ENSMUST00000122679 292 ntBASIC5.09□□□□□ -1.59
Nubp1Q9R060 Gm17951-201ENSMUST00000198536 496 ntBASIC5.09□□□□□ -1.59
Nubp1Q9R060 Snord80-202ENSMUST00000199023 77 ntBASIC5.09□□□□□ -1.59
Nubp1Q9R060 Gm5318-201ENSMUST00000205249 406 ntBASIC5.09□□□□□ -1.59
Nubp1Q9R060 Gm45215-201ENSMUST00000206407 395 ntBASIC5.09□□□□□ -1.59
Nubp1Q9R060 Fth-ps3-201ENSMUST00000210405 358 ntBASIC5.09□□□□□ -1.59
Nubp1Q9R060 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC5.09□□□□□ -1.59
Nubp1Q9R060 AC211878.1-201ENSMUST00000221668 474 ntBASIC5.09□□□□□ -1.59
Nubp1Q9R060 CT030195.1-201ENSMUST00000223887 378 ntBASIC5.09□□□□□ -1.59
Nubp1Q9R060 AC108416.2-201ENSMUST00000226792 367 ntBASIC5.09□□□□□ -1.59
Nubp1Q9R060 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Nubp1Q9R060 Gm22297-201ENSMUST00000083312 106 ntBASIC5.09□□□□□ -1.59
Nubp1Q9R060 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Nubp1Q9R060 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Nubp1Q9R060 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Nubp1Q9R060 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
Nubp1Q9R060 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Nubp1Q9R060 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
Nubp1Q9R060 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
Nubp1Q9R060 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC5.09□□□□□ -1.6
Nubp1Q9R060 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
Nubp1Q9R060 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
Nubp1Q9R060 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Nubp1Q9R060 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Nubp1Q9R060 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Nubp1Q9R060 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Nubp1Q9R060 Gm44535-201ENSMUST00000208889 3136 ntBASIC5.08□□□□□ -1.6
Nubp1Q9R060 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Nubp1Q9R060 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Nubp1Q9R060 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC5.08□□□□□ -1.6
Nubp1Q9R060 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Nubp1Q9R060 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Nubp1Q9R060 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC5.08□□□□□ -1.6
Nubp1Q9R060 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
Nubp1Q9R060 CT025686.2-201ENSMUST00000227898 3315 ntBASIC5.08□□□□□ -1.6
Nubp1Q9R060 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Nubp1Q9R060 Gm11971-201ENSMUST00000117715 288 ntBASIC5.08□□□□□ -1.6
Nubp1Q9R060 n-R5s216-201ENSMUST00000122755 112 ntBASIC5.08□□□□□ -1.6
Nubp1Q9R060 Gm24186-201ENSMUST00000157983 127 ntBASIC5.08□□□□□ -1.6
Nubp1Q9R060 Gm25606-201ENSMUST00000158363 95 ntBASIC5.08□□□□□ -1.6
Nubp1Q9R060 Gm24224-201ENSMUST00000158828 258 ntBASIC5.08□□□□□ -1.6
Nubp1Q9R060 Gm5967-201ENSMUST00000172723 494 ntBASIC5.08□□□□□ -1.6
Nubp1Q9R060 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Nubp1Q9R060 Mir6943-201ENSMUST00000185186 66 ntBASIC5.08□□□□□ -1.6
Nubp1Q9R060 Gm44337-201ENSMUST00000196553 114 ntBASIC5.08□□□□□ -1.6
Nubp1Q9R060 Gm8820-201ENSMUST00000204077 571 ntBASIC5.08□□□□□ -1.6
Nubp1Q9R060 Gm44214-201ENSMUST00000204153 606 ntBASIC5.08□□□□□ -1.6
Nubp1Q9R060 Gm34224-201ENSMUST00000204606 364 ntBASIC5.08□□□□□ -1.6
Nubp1Q9R060 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC5.08□□□□□ -1.6
Nubp1Q9R060 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC5.08□□□□□ -1.6
Nubp1Q9R060 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC5.08□□□□□ -1.6
Nubp1Q9R060 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC5.08□□□□□ -1.6
Nubp1Q9R060 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC5.08□□□□□ -1.6
Nubp1Q9R060 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Nubp1Q9R060 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Nubp1Q9R060 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Nubp1Q9R060 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Nubp1Q9R060 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Nubp1Q9R060 Gm43210-201ENSMUST00000196743 6152 ntBASIC5.08□□□□□ -1.6
Nubp1Q9R060 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Nubp1Q9R060 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Nubp1Q9R060 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Nubp1Q9R060 Gm45137-201ENSMUST00000208652 4415 ntBASIC5.08□□□□□ -1.6
Nubp1Q9R060 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Nubp1Q9R060 Gm37562-201ENSMUST00000194763 4328 ntBASIC5.08□□□□□ -1.6
Nubp1Q9R060 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Nubp1Q9R060 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Nubp1Q9R060 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Nubp1Q9R060 Ap5m1-208ENSMUST00000228238 3514 ntBASIC5.07□□□□□ -1.6
Nubp1Q9R060 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Nubp1Q9R060 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC5.07□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 95.5 ms