Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Gm24313-201ENSMUST00000082561 133 ntBASIC2.6□□□□□ -1.99
Scn11aQ9R053 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.6□□□□□ -1.99
Scn11aQ9R053 Gm9496-201ENSMUST00000191295 1601 ntBASIC2.6□□□□□ -1.99
Scn11aQ9R053 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Scn11aQ9R053 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC2.6□□□□□ -1.99
Scn11aQ9R053 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Scn11aQ9R053 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Scn11aQ9R053 Gm8121-201ENSMUST00000153583 499 ntBASIC2.59□□□□□ -1.99
Scn11aQ9R053 Gm24394-201ENSMUST00000158141 123 ntBASIC2.59□□□□□ -1.99
Scn11aQ9R053 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC2.59□□□□□ -1.99
Scn11aQ9R053 Gm26864-201ENSMUST00000181346 156 ntBASIC2.59□□□□□ -1.99
Scn11aQ9R053 Mir7679-201ENSMUST00000183379 63 ntBASIC2.59□□□□□ -1.99
Scn11aQ9R053 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Scn11aQ9R053 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC2.59□□□□□ -1.99
Scn11aQ9R053 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC2.59□□□□□ -1.99
Scn11aQ9R053 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC2.59□□□□□ -1.99
Scn11aQ9R053 Vmn1r47-201ENSMUST00000074881 933 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Scn11aQ9R053 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Scn11aQ9R053 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
Scn11aQ9R053 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
Scn11aQ9R053 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Scn11aQ9R053 Gm15183-201ENSMUST00000118933 348 ntBASIC2.59□□□□□ -2
Scn11aQ9R053 Gm12935-201ENSMUST00000119352 246 ntBASIC2.59□□□□□ -2
Scn11aQ9R053 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
Scn11aQ9R053 Gm24811-201ENSMUST00000175313 100 ntBASIC2.59□□□□□ -2
Scn11aQ9R053 Gm22716-201ENSMUST00000177596 107 ntBASIC2.59□□□□□ -2
Scn11aQ9R053 Gm29475-201ENSMUST00000190767 312 ntBASIC2.59□□□□□ -2
Scn11aQ9R053 Gm44849-201ENSMUST00000207595 484 ntBASIC2.59□□□□□ -2
Scn11aQ9R053 AC161250.1-201ENSMUST00000213426 1111 ntBASIC2.59□□□□□ -2
Scn11aQ9R053 AC153532.1-201ENSMUST00000218126 1111 ntBASIC2.59□□□□□ -2
Scn11aQ9R053 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Scn11aQ9R053 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
Scn11aQ9R053 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC2.59□□□□□ -2
Scn11aQ9R053 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC2.59□□□□□ -2
Scn11aQ9R053 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC2.59□□□□□ -2
Scn11aQ9R053 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC2.59□□□□□ -2
Scn11aQ9R053 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -2
Scn11aQ9R053 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC2.59□□□□□ -2
Scn11aQ9R053 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Scn11aQ9R053 Gm15714-201ENSMUST00000117168 250 ntBASIC2.58□□□□□ -2
Scn11aQ9R053 Gm26354-201ENSMUST00000158221 129 ntBASIC2.58□□□□□ -2
Scn11aQ9R053 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC2.58□□□□□ -2
Scn11aQ9R053 Gm43655-201ENSMUST00000197367 222 ntBASIC2.58□□□□□ -2
Scn11aQ9R053 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC2.58□□□□□ -2
Scn11aQ9R053 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC2.58□□□□□ -2
Scn11aQ9R053 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC2.58□□□□□ -2
Scn11aQ9R053 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC2.58□□□□□ -2
Scn11aQ9R053 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Scn11aQ9R053 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC2.57□□□□□ -2
Scn11aQ9R053 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Scn11aQ9R053 Gm14982-201ENSMUST00000121102 442 ntBASIC2.57□□□□□ -2
Scn11aQ9R053 Gm24900-201ENSMUST00000158128 134 ntBASIC2.57□□□□□ -2
Scn11aQ9R053 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC2.57□□□□□ -2
Scn11aQ9R053 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC2.57□□□□□ -2
Scn11aQ9R053 Gm27326-201ENSMUST00000183504 95 ntBASIC2.57□□□□□ -2
Scn11aQ9R053 Mir6901-201ENSMUST00000185062 62 ntBASIC2.57□□□□□ -2
Scn11aQ9R053 Gm3489-201ENSMUST00000190083 528 ntBASIC2.57□□□□□ -2
Scn11aQ9R053 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC2.57□□□□□ -2
Scn11aQ9R053 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC2.57□□□□□ -2
Scn11aQ9R053 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Scn11aQ9R053 Gm22723-201ENSMUST00000083820 129 ntBASIC2.57□□□□□ -2
Scn11aQ9R053 Gm5670-201ENSMUST00000093546 372 ntBASIC2.57□□□□□ -2
Scn11aQ9R053 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
Scn11aQ9R053 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Scn11aQ9R053 Gm9225-201ENSMUST00000121921 836 ntBASIC2.56□□□□□ -2
Scn11aQ9R053 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC2.56□□□□□ -2
Scn11aQ9R053 Gm22891-201ENSMUST00000158641 164 ntBASIC2.56□□□□□ -2
Scn11aQ9R053 Gm8224-201ENSMUST00000166178 497 ntBASIC2.56□□□□□ -2
Scn11aQ9R053 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC2.56□□□□□ -2
Scn11aQ9R053 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Scn11aQ9R053 Gm37616-201ENSMUST00000193974 322 ntBASIC2.56□□□□□ -2
Scn11aQ9R053 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Scn11aQ9R053 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Scn11aQ9R053 Gm8675-201ENSMUST00000201408 1856 ntBASIC2.56□□□□□ -2
Scn11aQ9R053 Gm20172-201ENSMUST00000193138 1551 ntBASIC2.56□□□□□ -2
Scn11aQ9R053 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Scn11aQ9R053 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC2.56□□□□□ -2
Scn11aQ9R053 Gm26280-201ENSMUST00000157096 101 ntBASIC2.56□□□□□ -2
Scn11aQ9R053 Gm26024-201ENSMUST00000158657 322 ntBASIC2.56□□□□□ -2
Scn11aQ9R053 Gm16326-201ENSMUST00000162843 414 ntBASIC2.56□□□□□ -2
Scn11aQ9R053 Gm22858-201ENSMUST00000174972 76 ntBASIC2.56□□□□□ -2
Scn11aQ9R053 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Scn11aQ9R053 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Scn11aQ9R053 Gm37684-201ENSMUST00000192779 355 ntBASIC2.56□□□□□ -2
Scn11aQ9R053 Gm44425-201ENSMUST00000203739 429 ntBASIC2.56□□□□□ -2
Scn11aQ9R053 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.56□□□□□ -2
Scn11aQ9R053 CT030662.1-201ENSMUST00000227380 232 ntBASIC2.56□□□□□ -2
Scn11aQ9R053 Gm38211-201ENSMUST00000192814 7217 ntBASIC2.55□□□□□ -2
Scn11aQ9R053 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Scn11aQ9R053 Gm13340-201ENSMUST00000117219 1545 ntBASIC2.55□□□□□ -2
Scn11aQ9R053 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC2.55□□□□□ -2
Scn11aQ9R053 CT009510.2-203ENSMUST00000226704 2136 ntBASIC2.55□□□□□ -2
Scn11aQ9R053 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Scn11aQ9R053 Gm26082-201ENSMUST00000104070 127 ntBASIC2.55□□□□□ -2
Scn11aQ9R053 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC2.55□□□□□ -2
Scn11aQ9R053 Gm24237-201ENSMUST00000157790 132 ntBASIC2.55□□□□□ -2
Scn11aQ9R053 Gm23267-201ENSMUST00000178490 132 ntBASIC2.55□□□□□ -2
Scn11aQ9R053 Gm18861-201ENSMUST00000202509 1186 ntBASIC2.55□□□□□ -2
Scn11aQ9R053 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC2.55□□□□□ -2
Scn11aQ9R053 AC101984.1-201ENSMUST00000219639 402 ntBASIC2.55□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms