Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Trem1Q9JKE2 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC2.74□□□□□ -1.97
Trem1Q9JKE2 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Trem1Q9JKE2 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Trem1Q9JKE2 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
Trem1Q9JKE2 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
Trem1Q9JKE2 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Trem1Q9JKE2 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Trem1Q9JKE2 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Trem1Q9JKE2 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Trem1Q9JKE2 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.73□□□□□ -1.97
Trem1Q9JKE2 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Trem1Q9JKE2 Gm43889-201ENSMUST00000203950 3681 ntBASIC2.73□□□□□ -1.97
Trem1Q9JKE2 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Trem1Q9JKE2 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC2.73□□□□□ -1.97
Trem1Q9JKE2 Gm22486-201ENSMUST00000116815 137 ntBASIC2.73□□□□□ -1.97
Trem1Q9JKE2 Gm14172-201ENSMUST00000118255 644 ntBASIC2.73□□□□□ -1.97
Trem1Q9JKE2 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC2.73□□□□□ -1.97
Trem1Q9JKE2 Gm22613-201ENSMUST00000122679 292 ntBASIC2.73□□□□□ -1.97
Trem1Q9JKE2 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Trem1Q9JKE2 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC2.73□□□□□ -1.97
Trem1Q9JKE2 Gm24534-201ENSMUST00000157949 291 ntBASIC2.73□□□□□ -1.97
Trem1Q9JKE2 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC2.73□□□□□ -1.97
Trem1Q9JKE2 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC2.73□□□□□ -1.97
Trem1Q9JKE2 Gm27861-201ENSMUST00000183920 214 ntBASIC2.73□□□□□ -1.97
Trem1Q9JKE2 Gm8392-201ENSMUST00000185647 835 ntBASIC2.73□□□□□ -1.97
Trem1Q9JKE2 Gm19257-201ENSMUST00000186121 183 ntBASIC2.73□□□□□ -1.97
Trem1Q9JKE2 Gm29045-201ENSMUST00000187278 698 ntBASIC2.73□□□□□ -1.97
Trem1Q9JKE2 Gm28647-201ENSMUST00000188416 197 ntBASIC2.73□□□□□ -1.97
Trem1Q9JKE2 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
Trem1Q9JKE2 Trbv8-201ENSMUST00000194020 285 ntBASIC2.73□□□□□ -1.97
Trem1Q9JKE2 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
Trem1Q9JKE2 AC168059.2-201ENSMUST00000224473 333 ntBASIC2.73□□□□□ -1.97
Trem1Q9JKE2 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Trem1Q9JKE2 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Trem1Q9JKE2 Gm10115-201ENSMUST00000076071 1228 ntBASIC2.73□□□□□ -1.97
Trem1Q9JKE2 Snord35b-201ENSMUST00000082833 87 ntBASIC2.73□□□□□ -1.97
Trem1Q9JKE2 Gm26128-201ENSMUST00000083170 110 ntBASIC2.73□□□□□ -1.97
Trem1Q9JKE2 Gm43092-201ENSMUST00000202986 1854 ntBASIC2.73□□□□□ -1.97
Trem1Q9JKE2 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Trem1Q9JKE2 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Trem1Q9JKE2 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Trem1Q9JKE2 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Trem1Q9JKE2 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Trem1Q9JKE2 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Trem1Q9JKE2 Gm14879-201ENSMUST00000117308 507 ntBASIC2.72□□□□□ -1.97
Trem1Q9JKE2 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Trem1Q9JKE2 Gm11430-201ENSMUST00000121317 217 ntBASIC2.72□□□□□ -1.97
Trem1Q9JKE2 Gm14363-201ENSMUST00000122304 409 ntBASIC2.72□□□□□ -1.97
Trem1Q9JKE2 Gm25945-201ENSMUST00000122484 135 ntBASIC2.72□□□□□ -1.97
Trem1Q9JKE2 n-R5s216-201ENSMUST00000122755 112 ntBASIC2.72□□□□□ -1.97
Trem1Q9JKE2 Gm26276-201ENSMUST00000157099 109 ntBASIC2.72□□□□□ -1.97
Trem1Q9JKE2 Gm17065-201ENSMUST00000165245 239 ntBASIC2.72□□□□□ -1.97
Trem1Q9JKE2 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC2.72□□□□□ -1.97
Trem1Q9JKE2 Gm26219-201ENSMUST00000175216 71 ntBASIC2.72□□□□□ -1.97
Trem1Q9JKE2 Gm23816-201ENSMUST00000179617 132 ntBASIC2.72□□□□□ -1.97
Trem1Q9JKE2 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC2.72□□□□□ -1.97
Trem1Q9JKE2 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Trem1Q9JKE2 Gm19637-201ENSMUST00000185933 579 ntBASIC2.72□□□□□ -1.97
Trem1Q9JKE2 Gm6060-201ENSMUST00000188671 251 ntBASIC2.72□□□□□ -1.97
Trem1Q9JKE2 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC2.72□□□□□ -1.97
Trem1Q9JKE2 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC2.72□□□□□ -1.97
Trem1Q9JKE2 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Trem1Q9JKE2 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC2.72□□□□□ -1.97
Trem1Q9JKE2 AC157570.3-201ENSMUST00000219281 205 ntBASIC2.72□□□□□ -1.97
Trem1Q9JKE2 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Trem1Q9JKE2 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC2.72□□□□□ -1.97
Trem1Q9JKE2 AC154788.1-201ENSMUST00000225003 340 ntBASIC2.72□□□□□ -1.97
Trem1Q9JKE2 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Trem1Q9JKE2 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Trem1Q9JKE2 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Trem1Q9JKE2 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Trem1Q9JKE2 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Trem1Q9JKE2 Mir421-201ENSMUST00000083575 76 ntBASIC2.72□□□□□ -1.97
Trem1Q9JKE2 Gm24254-201ENSMUST00000083702 104 ntBASIC2.72□□□□□ -1.97
Trem1Q9JKE2 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Trem1Q9JKE2 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Trem1Q9JKE2 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Trem1Q9JKE2 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Trem1Q9JKE2 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
Trem1Q9JKE2 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Trem1Q9JKE2 Gm13806-201ENSMUST00000117822 325 ntBASIC2.71□□□□□ -1.98
Trem1Q9JKE2 Gm16053-201ENSMUST00000120511 188 ntBASIC2.71□□□□□ -1.98
Trem1Q9JKE2 Gm14651-201ENSMUST00000147192 442 ntBASIC2.71□□□□□ -1.98
Trem1Q9JKE2 Gm26101-201ENSMUST00000157246 105 ntBASIC2.71□□□□□ -1.98
Trem1Q9JKE2 Gm26186-201ENSMUST00000157689 125 ntBASIC2.71□□□□□ -1.98
Trem1Q9JKE2 Gm24961-201ENSMUST00000157918 184 ntBASIC2.71□□□□□ -1.98
Trem1Q9JKE2 Gm25860-201ENSMUST00000158252 126 ntBASIC2.71□□□□□ -1.98
Trem1Q9JKE2 Gm23409-201ENSMUST00000158516 237 ntBASIC2.71□□□□□ -1.98
Trem1Q9JKE2 Gm22532-201ENSMUST00000158822 140 ntBASIC2.71□□□□□ -1.98
Trem1Q9JKE2 Gm27342-201ENSMUST00000183530 109 ntBASIC2.71□□□□□ -1.98
Trem1Q9JKE2 Mir6541-201ENSMUST00000183649 110 ntBASIC2.71□□□□□ -1.98
Trem1Q9JKE2 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC2.71□□□□□ -1.98
Trem1Q9JKE2 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC2.71□□□□□ -1.98
Trem1Q9JKE2 Gm28314-201ENSMUST00000191276 345 ntBASIC2.71□□□□□ -1.98
Trem1Q9JKE2 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC2.71□□□□□ -1.98
Trem1Q9JKE2 Mir129b-201ENSMUST00000197461 65 ntBASIC2.71□□□□□ -1.98
Trem1Q9JKE2 Gm5983-201ENSMUST00000197739 770 ntBASIC2.71□□□□□ -1.98
Trem1Q9JKE2 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC2.71□□□□□ -1.98
Trem1Q9JKE2 Gm44355-201ENSMUST00000200417 104 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms