Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Gm19203-201ENSMUST00000174049 939 ntBASIC2.01□□□□□ -2.09
Trem3Q9JKE1 Mir6907-201ENSMUST00000183764 71 ntBASIC2.01□□□□□ -2.09
Trem3Q9JKE1 Gm8676-201ENSMUST00000184206 637 ntBASIC2.01□□□□□ -2.09
Trem3Q9JKE1 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC2.01□□□□□ -2.09
Trem3Q9JKE1 Gm28314-201ENSMUST00000191276 345 ntBASIC2.01□□□□□ -2.09
Trem3Q9JKE1 Gm43626-201ENSMUST00000198575 162 ntBASIC2.01□□□□□ -2.09
Trem3Q9JKE1 Gm43675-201ENSMUST00000199468 1184 ntBASIC2.01□□□□□ -2.09
Trem3Q9JKE1 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC2.01□□□□□ -2.09
Trem3Q9JKE1 Gm45400-201ENSMUST00000211603 653 ntBASIC2.01□□□□□ -2.09
Trem3Q9JKE1 Gm18228-201ENSMUST00000217297 1091 ntBASIC2.01□□□□□ -2.09
Trem3Q9JKE1 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC2.01□□□□□ -2.09
Trem3Q9JKE1 AC154184.2-201ENSMUST00000225335 349 ntBASIC2.01□□□□□ -2.09
Trem3Q9JKE1 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.01□□□□□ -2.09
Trem3Q9JKE1 AC107453.2-201ENSMUST00000227714 655 ntBASIC2.01□□□□□ -2.09
Trem3Q9JKE1 AC131029.2-202ENSMUST00000228430 496 ntBASIC2.01□□□□□ -2.09
Trem3Q9JKE1 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC2.01□□□□□ -2.09
Trem3Q9JKE1 Olfr815-201ENSMUST00000071557 951 ntBASIC2.01□□□□□ -2.09
Trem3Q9JKE1 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC2.01□□□□□ -2.09
Trem3Q9JKE1 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Trem3Q9JKE1 Gm25199-201ENSMUST00000083095 104 ntBASIC2.01□□□□□ -2.09
Trem3Q9JKE1 AF357428-201ENSMUST00000083815 69 ntBASIC2.01□□□□□ -2.09
Trem3Q9JKE1 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Trem3Q9JKE1 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
Trem3Q9JKE1 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.01□□□□□ -2.09
Trem3Q9JKE1 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
Trem3Q9JKE1 Gm14429-201ENSMUST00000121881 2024 ntBASIC2□□□□□ -2.09
Trem3Q9JKE1 AC124746.1-201ENSMUST00000227535 1300 ntBASIC2□□□□□ -2.09
Trem3Q9JKE1 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2□□□□□ -2.09
Trem3Q9JKE1 Gm24280-201ENSMUST00000104237 134 ntBASIC2□□□□□ -2.09
Trem3Q9JKE1 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC2□□□□□ -2.09
Trem3Q9JKE1 Gm13678-201ENSMUST00000118926 340 ntBASIC2□□□□□ -2.09
Trem3Q9JKE1 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Trem3Q9JKE1 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Trem3Q9JKE1 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC2□□□□□ -2.09
Trem3Q9JKE1 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC2□□□□□ -2.09
Trem3Q9JKE1 Gm24138-201ENSMUST00000157572 114 ntBASIC2□□□□□ -2.09
Trem3Q9JKE1 Gm17204-201ENSMUST00000167936 478 ntBASIC2□□□□□ -2.09
Trem3Q9JKE1 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Trem3Q9JKE1 Gm25598-201ENSMUST00000179031 107 ntBASIC2□□□□□ -2.09
Trem3Q9JKE1 Gm25528-201ENSMUST00000180264 132 ntBASIC2□□□□□ -2.09
Trem3Q9JKE1 Gm27155-201ENSMUST00000183716 898 ntBASIC2□□□□□ -2.09
Trem3Q9JKE1 Gm27582-201ENSMUST00000184084 126 ntBASIC2□□□□□ -2.09
Trem3Q9JKE1 Gm29524-201ENSMUST00000190819 699 ntBASIC2□□□□□ -2.09
Trem3Q9JKE1 Gm29523-201ENSMUST00000191415 699 ntBASIC2□□□□□ -2.09
Trem3Q9JKE1 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC2□□□□□ -2.09
Trem3Q9JKE1 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC2□□□□□ -2.09
Trem3Q9JKE1 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC2□□□□□ -2.09
Trem3Q9JKE1 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC2□□□□□ -2.09
Trem3Q9JKE1 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC2□□□□□ -2.09
Trem3Q9JKE1 Gm8031-201ENSMUST00000213430 626 ntBASIC2□□□□□ -2.09
Trem3Q9JKE1 AC122194.1-201ENSMUST00000220549 293 ntBASIC2□□□□□ -2.09
Trem3Q9JKE1 Mir325-201ENSMUST00000083491 98 ntBASIC2□□□□□ -2.09
Trem3Q9JKE1 Mir423-201ENSMUST00000083584 109 ntBASIC2□□□□□ -2.09
Trem3Q9JKE1 Gm42659-201ENSMUST00000196955 1754 ntBASIC2□□□□□ -2.09
Trem3Q9JKE1 Gm7133-201ENSMUST00000187797 2039 ntBASIC2□□□□□ -2.09
Trem3Q9JKE1 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Trem3Q9JKE1 Gm37664-201ENSMUST00000194607 3813 ntBASIC1.99□□□□□ -2.09
Trem3Q9JKE1 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC1.99□□□□□ -2.09
Trem3Q9JKE1 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
Trem3Q9JKE1 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
Trem3Q9JKE1 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC1.99□□□□□ -2.09
Trem3Q9JKE1 Gm22023-201ENSMUST00000104354 130 ntBASIC1.99□□□□□ -2.09
Trem3Q9JKE1 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC1.99□□□□□ -2.09
Trem3Q9JKE1 Gm11429-201ENSMUST00000119089 144 ntBASIC1.99□□□□□ -2.09
Trem3Q9JKE1 Gm14736-201ENSMUST00000121470 336 ntBASIC1.99□□□□□ -2.09
Trem3Q9JKE1 Gm25292-201ENSMUST00000122797 322 ntBASIC1.99□□□□□ -2.09
Trem3Q9JKE1 Mup-ps12-201ENSMUST00000126217 549 ntBASIC1.99□□□□□ -2.09
Trem3Q9JKE1 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC1.99□□□□□ -2.09
Trem3Q9JKE1 Gm24060-201ENSMUST00000157494 95 ntBASIC1.99□□□□□ -2.09
Trem3Q9JKE1 Gm8023-201ENSMUST00000195298 903 ntBASIC1.99□□□□□ -2.09
Trem3Q9JKE1 Gm3933-201ENSMUST00000195391 439 ntBASIC1.99□□□□□ -2.09
Trem3Q9JKE1 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC1.99□□□□□ -2.09
Trem3Q9JKE1 Gm43070-201ENSMUST00000196938 415 ntBASIC1.99□□□□□ -2.09
Trem3Q9JKE1 Gm8209-201ENSMUST00000206386 553 ntBASIC1.99□□□□□ -2.09
Trem3Q9JKE1 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC1.99□□□□□ -2.09
Trem3Q9JKE1 Gm44555-201ENSMUST00000209008 148 ntBASIC1.99□□□□□ -2.09
Trem3Q9JKE1 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
Trem3Q9JKE1 Zmym2-202ENSMUST00000223669 1281 ntBASIC1.99□□□□□ -2.09
Trem3Q9JKE1 AC117814.1-201ENSMUST00000226135 352 ntBASIC1.99□□□□□ -2.09
Trem3Q9JKE1 Gm25810-201ENSMUST00000082752 108 ntBASIC1.99□□□□□ -2.09
Trem3Q9JKE1 n-R5s50-201ENSMUST00000083168 111 ntBASIC1.99□□□□□ -2.09
Trem3Q9JKE1 Snord104-201ENSMUST00000083192 70 ntBASIC1.99□□□□□ -2.09
Trem3Q9JKE1 Gm23096-201ENSMUST00000083447 107 ntBASIC1.99□□□□□ -2.09
Trem3Q9JKE1 Mir103-2-201ENSMUST00000083629 86 ntBASIC1.99□□□□□ -2.09
Trem3Q9JKE1 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Trem3Q9JKE1 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
Trem3Q9JKE1 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Trem3Q9JKE1 Gm42967-201ENSMUST00000198647 2312 ntBASIC1.99□□□□□ -2.09
Trem3Q9JKE1 AC164164.1-201ENSMUST00000223245 2340 ntBASIC1.99□□□□□ -2.09
Trem3Q9JKE1 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Trem3Q9JKE1 Gm38278-201ENSMUST00000194715 1365 ntBASIC1.98□□□□□ -2.09
Trem3Q9JKE1 AC115047.2-201ENSMUST00000214421 1848 ntBASIC1.98□□□□□ -2.09
Trem3Q9JKE1 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC1.98□□□□□ -2.09
Trem3Q9JKE1 AC152979.2-201ENSMUST00000219702 3814 ntBASIC1.98□□□□□ -2.09
Trem3Q9JKE1 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Trem3Q9JKE1 Gm45178-201ENSMUST00000207744 4110 ntBASIC1.98□□□□□ -2.09
Trem3Q9JKE1 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Trem3Q9JKE1 Gm25647-201ENSMUST00000101832 78 ntBASIC1.98□□□□□ -2.09
Trem3Q9JKE1 Gm25823-201ENSMUST00000101995 78 ntBASIC1.98□□□□□ -2.09
Trem3Q9JKE1 Gm11460-201ENSMUST00000118200 361 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms