Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Mir673-201ENSMUST00000102361 91 ntBASIC3.96□□□□□ -1.78
Trim54Q9ERP3 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC3.96□□□□□ -1.78
Trim54Q9ERP3 Gm12006-201ENSMUST00000120786 403 ntBASIC3.96□□□□□ -1.78
Trim54Q9ERP3 Gm14101-201ENSMUST00000121502 473 ntBASIC3.96□□□□□ -1.78
Trim54Q9ERP3 Gm14411-201ENSMUST00000121798 914 ntBASIC3.96□□□□□ -1.78
Trim54Q9ERP3 Gm25294-201ENSMUST00000122791 104 ntBASIC3.96□□□□□ -1.78
Trim54Q9ERP3 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Trim54Q9ERP3 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Trim54Q9ERP3 Gm25860-201ENSMUST00000158252 126 ntBASIC3.96□□□□□ -1.78
Trim54Q9ERP3 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC3.96□□□□□ -1.78
Trim54Q9ERP3 Gm24306-201ENSMUST00000180229 79 ntBASIC3.96□□□□□ -1.78
Trim54Q9ERP3 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC3.96□□□□□ -1.78
Trim54Q9ERP3 Gm27845-201ENSMUST00000184479 114 ntBASIC3.96□□□□□ -1.78
Trim54Q9ERP3 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC3.96□□□□□ -1.78
Trim54Q9ERP3 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Trim54Q9ERP3 Gm38044-201ENSMUST00000192964 487 ntBASIC3.96□□□□□ -1.78
Trim54Q9ERP3 Gm37771-201ENSMUST00000193121 265 ntBASIC3.96□□□□□ -1.78
Trim54Q9ERP3 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC3.96□□□□□ -1.78
Trim54Q9ERP3 Gm19649-201ENSMUST00000201126 822 ntBASIC3.96□□□□□ -1.78
Trim54Q9ERP3 Gm44824-201ENSMUST00000207021 229 ntBASIC3.96□□□□□ -1.78
Trim54Q9ERP3 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Trim54Q9ERP3 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC3.96□□□□□ -1.78
Trim54Q9ERP3 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC3.96□□□□□ -1.78
Trim54Q9ERP3 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.96□□□□□ -1.78
Trim54Q9ERP3 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Trim54Q9ERP3 Gm9309-201ENSMUST00000223537 546 ntBASIC3.96□□□□□ -1.78
Trim54Q9ERP3 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC3.96□□□□□ -1.78
Trim54Q9ERP3 Gm25792-201ENSMUST00000083289 100 ntBASIC3.96□□□□□ -1.78
Trim54Q9ERP3 Gm22740-201ENSMUST00000083439 109 ntBASIC3.96□□□□□ -1.78
Trim54Q9ERP3 Mir19a-201ENSMUST00000083482 82 ntBASIC3.96□□□□□ -1.78
Trim54Q9ERP3 Mir101b-201ENSMUST00000083622 97 ntBASIC3.96□□□□□ -1.78
Trim54Q9ERP3 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.96□□□□□ -1.78
Trim54Q9ERP3 Gm45262-201ENSMUST00000209917 1463 ntBASIC3.96□□□□□ -1.78
Trim54Q9ERP3 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Trim54Q9ERP3 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Trim54Q9ERP3 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Trim54Q9ERP3 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC3.95□□□□□ -1.78
Trim54Q9ERP3 Gm36960-201ENSMUST00000195491 2035 ntBASIC3.95□□□□□ -1.78
Trim54Q9ERP3 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Trim54Q9ERP3 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Trim54Q9ERP3 Gm22590-201ENSMUST00000104247 128 ntBASIC3.95□□□□□ -1.78
Trim54Q9ERP3 Igkv13-87-201ENSMUST00000114214 286 ntBASIC3.95□□□□□ -1.78
Trim54Q9ERP3 Gm12982-201ENSMUST00000117408 190 ntBASIC3.95□□□□□ -1.78
Trim54Q9ERP3 Gm12137-201ENSMUST00000119565 346 ntBASIC3.95□□□□□ -1.78
Trim54Q9ERP3 Gm14766-201ENSMUST00000121689 367 ntBASIC3.95□□□□□ -1.78
Trim54Q9ERP3 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC3.95□□□□□ -1.78
Trim54Q9ERP3 Mup-ps12-201ENSMUST00000126217 549 ntBASIC3.95□□□□□ -1.78
Trim54Q9ERP3 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC3.95□□□□□ -1.78
Trim54Q9ERP3 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC3.95□□□□□ -1.78
Trim54Q9ERP3 Gm26028-201ENSMUST00000158660 294 ntBASIC3.95□□□□□ -1.78
Trim54Q9ERP3 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC3.95□□□□□ -1.78
Trim54Q9ERP3 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC3.95□□□□□ -1.78
Trim54Q9ERP3 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC3.95□□□□□ -1.78
Trim54Q9ERP3 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC3.95□□□□□ -1.78
Trim54Q9ERP3 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC3.95□□□□□ -1.78
Trim54Q9ERP3 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Trim54Q9ERP3 Gm21638-201ENSMUST00000179473 836 ntBASIC3.95□□□□□ -1.78
Trim54Q9ERP3 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC3.95□□□□□ -1.78
Trim54Q9ERP3 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC3.95□□□□□ -1.78
Trim54Q9ERP3 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC3.95□□□□□ -1.78
Trim54Q9ERP3 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC3.95□□□□□ -1.78
Trim54Q9ERP3 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Trim54Q9ERP3 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC3.95□□□□□ -1.78
Trim54Q9ERP3 Gm28927-201ENSMUST00000191528 272 ntBASIC3.95□□□□□ -1.78
Trim54Q9ERP3 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC3.95□□□□□ -1.78
Trim54Q9ERP3 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC3.95□□□□□ -1.78
Trim54Q9ERP3 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC3.95□□□□□ -1.78
Trim54Q9ERP3 Mir7682-201ENSMUST00000198467 58 ntBASIC3.95□□□□□ -1.78
Trim54Q9ERP3 Gm34091-201ENSMUST00000200875 604 ntBASIC3.95□□□□□ -1.78
Trim54Q9ERP3 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC3.95□□□□□ -1.78
Trim54Q9ERP3 Gm43224-201ENSMUST00000201567 898 ntBASIC3.95□□□□□ -1.78
Trim54Q9ERP3 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC3.95□□□□□ -1.78
Trim54Q9ERP3 Gm45420-201ENSMUST00000211243 425 ntBASIC3.95□□□□□ -1.78
Trim54Q9ERP3 Gm45327-201ENSMUST00000211612 565 ntBASIC3.95□□□□□ -1.78
Trim54Q9ERP3 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Trim54Q9ERP3 Gm18160-201ENSMUST00000214279 827 ntBASIC3.95□□□□□ -1.78
Trim54Q9ERP3 Gm17890-201ENSMUST00000221419 757 ntBASIC3.95□□□□□ -1.78
Trim54Q9ERP3 AC157654.1-201ENSMUST00000224130 820 ntBASIC3.95□□□□□ -1.78
Trim54Q9ERP3 AC118006.1-201ENSMUST00000224211 501 ntBASIC3.95□□□□□ -1.78
Trim54Q9ERP3 CT030662.1-201ENSMUST00000227380 232 ntBASIC3.95□□□□□ -1.78
Trim54Q9ERP3 Gm25800-201ENSMUST00000082636 134 ntBASIC3.95□□□□□ -1.78
Trim54Q9ERP3 Gm23503-201ENSMUST00000083903 107 ntBASIC3.95□□□□□ -1.78
Trim54Q9ERP3 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC3.95□□□□□ -1.78
Trim54Q9ERP3 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Trim54Q9ERP3 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Trim54Q9ERP3 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
Trim54Q9ERP3 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Trim54Q9ERP3 Gm7135-202ENSMUST00000191257 1905 ntBASIC3.95□□□□□ -1.78
Trim54Q9ERP3 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Trim54Q9ERP3 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Trim54Q9ERP3 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Trim54Q9ERP3 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Trim54Q9ERP3 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Trim54Q9ERP3 Gm37298-201ENSMUST00000193770 3868 ntBASIC3.94□□□□□ -1.78
Trim54Q9ERP3 Gm14816-201ENSMUST00000117174 294 ntBASIC3.94□□□□□ -1.78
Trim54Q9ERP3 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC3.94□□□□□ -1.78
Trim54Q9ERP3 Gm14359-201ENSMUST00000118883 424 ntBASIC3.94□□□□□ -1.78
Trim54Q9ERP3 Gm15037-201ENSMUST00000120358 259 ntBASIC3.94□□□□□ -1.78
Trim54Q9ERP3 Gm11430-201ENSMUST00000121317 217 ntBASIC3.94□□□□□ -1.78
Trim54Q9ERP3 Gm12276-201ENSMUST00000121709 301 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 122.9 ms