Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC2.6□□□□□ -1.99
Lima1Q9ERG0 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Lima1Q9ERG0 Gm27999-201ENSMUST00000183539 193 ntBASIC2.6□□□□□ -1.99
Lima1Q9ERG0 Mir6353-201ENSMUST00000183596 113 ntBASIC2.6□□□□□ -1.99
Lima1Q9ERG0 Mir7242-201ENSMUST00000183710 79 ntBASIC2.6□□□□□ -1.99
Lima1Q9ERG0 Gm27786-201ENSMUST00000184337 70 ntBASIC2.6□□□□□ -1.99
Lima1Q9ERG0 Gm28744-201ENSMUST00000189939 340 ntBASIC2.6□□□□□ -1.99
Lima1Q9ERG0 Gm38311-201ENSMUST00000192945 165 ntBASIC2.6□□□□□ -1.99
Lima1Q9ERG0 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC2.6□□□□□ -1.99
Lima1Q9ERG0 Gm44061-201ENSMUST00000203962 1195 ntBASIC2.6□□□□□ -1.99
Lima1Q9ERG0 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.6□□□□□ -1.99
Lima1Q9ERG0 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC2.6□□□□□ -1.99
Lima1Q9ERG0 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.6□□□□□ -1.99
Lima1Q9ERG0 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Lima1Q9ERG0 AC172751.1-201ENSMUST00000226887 440 ntBASIC2.6□□□□□ -1.99
Lima1Q9ERG0 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC2.6□□□□□ -1.99
Lima1Q9ERG0 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Lima1Q9ERG0 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC2.6□□□□□ -1.99
Lima1Q9ERG0 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Lima1Q9ERG0 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
Lima1Q9ERG0 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Lima1Q9ERG0 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Lima1Q9ERG0 Mir667-201ENSMUST00000102441 92 ntBASIC2.59□□□□□ -1.99
Lima1Q9ERG0 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC2.59□□□□□ -1.99
Lima1Q9ERG0 Gm11881-201ENSMUST00000119408 572 ntBASIC2.59□□□□□ -1.99
Lima1Q9ERG0 Gm9440-201ENSMUST00000119667 539 ntBASIC2.59□□□□□ -1.99
Lima1Q9ERG0 Gm12105-201ENSMUST00000120846 779 ntBASIC2.59□□□□□ -1.99
Lima1Q9ERG0 Gm7350-201ENSMUST00000120964 636 ntBASIC2.59□□□□□ -1.99
Lima1Q9ERG0 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Lima1Q9ERG0 Gm12819-201ENSMUST00000122223 629 ntBASIC2.59□□□□□ -1.99
Lima1Q9ERG0 Gm24879-201ENSMUST00000158386 143 ntBASIC2.59□□□□□ -1.99
Lima1Q9ERG0 Gm24002-201ENSMUST00000158456 104 ntBASIC2.59□□□□□ -1.99
Lima1Q9ERG0 Gm26406-201ENSMUST00000158503 124 ntBASIC2.59□□□□□ -1.99
Lima1Q9ERG0 Gm25490-201ENSMUST00000158734 130 ntBASIC2.59□□□□□ -1.99
Lima1Q9ERG0 Gm24875-201ENSMUST00000158888 104 ntBASIC2.59□□□□□ -1.99
Lima1Q9ERG0 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC2.59□□□□□ -1.99
Lima1Q9ERG0 Gm25944-201ENSMUST00000178758 94 ntBASIC2.59□□□□□ -1.99
Lima1Q9ERG0 Gm8649-201ENSMUST00000181799 233 ntBASIC2.59□□□□□ -1.99
Lima1Q9ERG0 Mir6363-201ENSMUST00000184880 114 ntBASIC2.59□□□□□ -1.99
Lima1Q9ERG0 Gm28623-201ENSMUST00000187219 192 ntBASIC2.59□□□□□ -1.99
Lima1Q9ERG0 Trbv12-3-201ENSMUST00000192675 372 ntBASIC2.59□□□□□ -1.99
Lima1Q9ERG0 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC2.59□□□□□ -1.99
Lima1Q9ERG0 Gm44600-201ENSMUST00000208540 111 ntBASIC2.59□□□□□ -1.99
Lima1Q9ERG0 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC2.59□□□□□ -1.99
Lima1Q9ERG0 AC069074.2-201ENSMUST00000217819 428 ntBASIC2.59□□□□□ -1.99
Lima1Q9ERG0 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC2.59□□□□□ -1.99
Lima1Q9ERG0 n-R5s86-201ENSMUST00000083215 119 ntBASIC2.59□□□□□ -1.99
Lima1Q9ERG0 Mir128-1-201ENSMUST00000083586 70 ntBASIC2.59□□□□□ -1.99
Lima1Q9ERG0 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Lima1Q9ERG0 Gm6207-201ENSMUST00000120075 1386 ntBASIC2.59□□□□□ -2
Lima1Q9ERG0 Gm6228-201ENSMUST00000178856 1386 ntBASIC2.59□□□□□ -2
Lima1Q9ERG0 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
Lima1Q9ERG0 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Lima1Q9ERG0 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC2.58□□□□□ -2
Lima1Q9ERG0 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Lima1Q9ERG0 Gm25500-201ENSMUST00000104426 123 ntBASIC2.58□□□□□ -2
Lima1Q9ERG0 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.58□□□□□ -2
Lima1Q9ERG0 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC2.58□□□□□ -2
Lima1Q9ERG0 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC2.58□□□□□ -2
Lima1Q9ERG0 Gm25280-201ENSMUST00000157269 101 ntBASIC2.58□□□□□ -2
Lima1Q9ERG0 Gm24532-201ENSMUST00000157951 286 ntBASIC2.58□□□□□ -2
Lima1Q9ERG0 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC2.58□□□□□ -2
Lima1Q9ERG0 Gm17187-201ENSMUST00000164622 410 ntBASIC2.58□□□□□ -2
Lima1Q9ERG0 Adgrg4-206ENSMUST00000168724 531 ntBASIC2.58□□□□□ -2
Lima1Q9ERG0 Gm25942-201ENSMUST00000180080 110 ntBASIC2.58□□□□□ -2
Lima1Q9ERG0 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC2.58□□□□□ -2
Lima1Q9ERG0 Gm43368-201ENSMUST00000200638 409 ntBASIC2.58□□□□□ -2
Lima1Q9ERG0 Gm42896-201ENSMUST00000201249 1113 ntBASIC2.58□□□□□ -2
Lima1Q9ERG0 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC2.58□□□□□ -2
Lima1Q9ERG0 Gm19540-201ENSMUST00000221843 810 ntBASIC2.58□□□□□ -2
Lima1Q9ERG0 Zmym2-202ENSMUST00000223669 1281 ntBASIC2.58□□□□□ -2
Lima1Q9ERG0 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC2.58□□□□□ -2
Lima1Q9ERG0 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Lima1Q9ERG0 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC2.58□□□□□ -2
Lima1Q9ERG0 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.58□□□□□ -2
Lima1Q9ERG0 Gm15975-201ENSMUST00000122385 1402 ntBASIC2.58□□□□□ -2
Lima1Q9ERG0 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC2.58□□□□□ -2
Lima1Q9ERG0 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
Lima1Q9ERG0 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Lima1Q9ERG0 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
Lima1Q9ERG0 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
Lima1Q9ERG0 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC2.57□□□□□ -2
Lima1Q9ERG0 Gm12787-201ENSMUST00000119234 396 ntBASIC2.57□□□□□ -2
Lima1Q9ERG0 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Lima1Q9ERG0 Gm14506-201ENSMUST00000121165 536 ntBASIC2.57□□□□□ -2
Lima1Q9ERG0 Gm14800-201ENSMUST00000122084 1272 ntBASIC2.57□□□□□ -2
Lima1Q9ERG0 Gm24592-201ENSMUST00000122505 106 ntBASIC2.57□□□□□ -2
Lima1Q9ERG0 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Lima1Q9ERG0 Gm23205-201ENSMUST00000158671 103 ntBASIC2.57□□□□□ -2
Lima1Q9ERG0 Gm17065-201ENSMUST00000165245 239 ntBASIC2.57□□□□□ -2
Lima1Q9ERG0 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.57□□□□□ -2
Lima1Q9ERG0 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.57□□□□□ -2
Lima1Q9ERG0 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC2.57□□□□□ -2
Lima1Q9ERG0 Igkv11-118-201ENSMUST00000199448 346 ntBASIC2.57□□□□□ -2
Lima1Q9ERG0 Gm15235-201ENSMUST00000200572 194 ntBASIC2.57□□□□□ -2
Lima1Q9ERG0 Gm44520-201ENSMUST00000205447 802 ntBASIC2.57□□□□□ -2
Lima1Q9ERG0 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC2.57□□□□□ -2
Lima1Q9ERG0 AC171206.2-201ENSMUST00000215252 389 ntBASIC2.57□□□□□ -2
Lima1Q9ERG0 Gm18346-201ENSMUST00000216782 325 ntBASIC2.57□□□□□ -2
Lima1Q9ERG0 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC2.57□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 105.4 ms