Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm21914-201ENSMUST00000178452 498 ntBASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Gm21723-201ENSMUST00000178692 498 ntBASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Gm21916-201ENSMUST00000178771 498 ntBASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Gm21801-201ENSMUST00000178865 498 ntBASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Gm21633-201ENSMUST00000178941 498 ntBASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Gm21821-201ENSMUST00000179646 498 ntBASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Gm21588-201ENSMUST00000180074 498 ntBASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Gm21780-201ENSMUST00000180128 498 ntBASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Gm21572-201ENSMUST00000180134 498 ntBASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Gm21529-201ENSMUST00000180175 498 ntBASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Gm28011-201ENSMUST00000184097 175 ntBASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Gm29370-202ENSMUST00000187476 499 ntBASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Olfr1055-202ENSMUST00000188023 939 ntBASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Gm18645-201ENSMUST00000209593 651 ntBASIC2.75□□□□□ -1.97
Cdc40Q9DC48 AC069561.3-201ENSMUST00000217321 114 ntBASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC2.75□□□□□ -1.97
Cdc40Q9DC48 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC2.75□□□□□ -1.97
Cdc40Q9DC48 AC155314.1-201ENSMUST00000227624 508 ntBASIC2.75□□□□□ -1.97
Cdc40Q9DC48 AC109172.2-201ENSMUST00000228792 381 ntBASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Gm43379-201ENSMUST00000196253 7726 ntBASIC2.74□□□□□ -1.97
Cdc40Q9DC48 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Cdc40Q9DC48 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Cdc40Q9DC48 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Cdc40Q9DC48 Gm24068-201ENSMUST00000104513 132 ntBASIC2.74□□□□□ -1.97
Cdc40Q9DC48 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Cdc40Q9DC48 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC2.74□□□□□ -1.97
Cdc40Q9DC48 Gm12891-201ENSMUST00000119358 240 ntBASIC2.74□□□□□ -1.97
Cdc40Q9DC48 Gm14554-201ENSMUST00000119548 661 ntBASIC2.74□□□□□ -1.97
Cdc40Q9DC48 Gm11321-201ENSMUST00000121257 902 ntBASIC2.74□□□□□ -1.97
Cdc40Q9DC48 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Cdc40Q9DC48 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC2.74□□□□□ -1.97
Cdc40Q9DC48 Gm15986-201ENSMUST00000122153 400 ntBASIC2.74□□□□□ -1.97
Cdc40Q9DC48 Gm9785-202ENSMUST00000144563 593 ntBASIC2.74□□□□□ -1.97
Cdc40Q9DC48 Gm22769-201ENSMUST00000158367 98 ntBASIC2.74□□□□□ -1.97
Cdc40Q9DC48 Gm20450-201ENSMUST00000173652 147 ntBASIC2.74□□□□□ -1.97
Cdc40Q9DC48 Gm25360-201ENSMUST00000178786 191 ntBASIC2.74□□□□□ -1.97
Cdc40Q9DC48 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Cdc40Q9DC48 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Cdc40Q9DC48 Mir6917-201ENSMUST00000184111 61 ntBASIC2.74□□□□□ -1.97
Cdc40Q9DC48 Ighv1-6-201ENSMUST00000193849 293 ntBASIC2.74□□□□□ -1.97
Cdc40Q9DC48 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC2.74□□□□□ -1.97
Cdc40Q9DC48 Gm24350-202ENSMUST00000198309 132 ntBASIC2.74□□□□□ -1.97
Cdc40Q9DC48 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC2.74□□□□□ -1.97
Cdc40Q9DC48 Gm44223-201ENSMUST00000204854 114 ntBASIC2.74□□□□□ -1.97
Cdc40Q9DC48 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Cdc40Q9DC48 Gm18338-201ENSMUST00000222381 560 ntBASIC2.74□□□□□ -1.97
Cdc40Q9DC48 CT025525.1-201ENSMUST00000226325 1054 ntBASIC2.74□□□□□ -1.97
Cdc40Q9DC48 AC133176.1-201ENSMUST00000226668 219 ntBASIC2.74□□□□□ -1.97
Cdc40Q9DC48 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Cdc40Q9DC48 Gm22575-201ENSMUST00000082981 110 ntBASIC2.74□□□□□ -1.97
Cdc40Q9DC48 Gm24928-201ENSMUST00000083399 107 ntBASIC2.74□□□□□ -1.97
Cdc40Q9DC48 Gm25897-201ENSMUST00000083709 107 ntBASIC2.74□□□□□ -1.97
Cdc40Q9DC48 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Cdc40Q9DC48 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
Cdc40Q9DC48 Gm45263-201ENSMUST00000210377 1375 ntBASIC2.74□□□□□ -1.97
Cdc40Q9DC48 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Cdc40Q9DC48 Gm37236-201ENSMUST00000193670 3249 ntBASIC2.73□□□□□ -1.97
Cdc40Q9DC48 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Cdc40Q9DC48 Gm24120-201ENSMUST00000103978 129 ntBASIC2.73□□□□□ -1.97
Cdc40Q9DC48 Gm12213-201ENSMUST00000119924 353 ntBASIC2.73□□□□□ -1.97
Cdc40Q9DC48 Gm9001-201ENSMUST00000121642 399 ntBASIC2.73□□□□□ -1.97
Cdc40Q9DC48 Mup-ps15-201ENSMUST00000121741 539 ntBASIC2.73□□□□□ -1.97
Cdc40Q9DC48 Gm15466-201ENSMUST00000122299 333 ntBASIC2.73□□□□□ -1.97
Cdc40Q9DC48 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Cdc40Q9DC48 Gm22322-201ENSMUST00000157151 111 ntBASIC2.73□□□□□ -1.97
Cdc40Q9DC48 Gm22961-201ENSMUST00000157964 106 ntBASIC2.73□□□□□ -1.97
Cdc40Q9DC48 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC2.73□□□□□ -1.97
Cdc40Q9DC48 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
Cdc40Q9DC48 Gm26928-201ENSMUST00000182674 572 ntBASIC2.73□□□□□ -1.97
Cdc40Q9DC48 Gm27796-201ENSMUST00000183863 261 ntBASIC2.73□□□□□ -1.97
Cdc40Q9DC48 Gm37576-201ENSMUST00000194228 372 ntBASIC2.73□□□□□ -1.97
Cdc40Q9DC48 Ighv1-41-201ENSMUST00000194414 329 ntBASIC2.73□□□□□ -1.97
Cdc40Q9DC48 Gm38018-201ENSMUST00000195651 540 ntBASIC2.73□□□□□ -1.97
Cdc40Q9DC48 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC2.73□□□□□ -1.97
Cdc40Q9DC48 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC2.73□□□□□ -1.97
Cdc40Q9DC48 Gm44425-201ENSMUST00000203739 429 ntBASIC2.73□□□□□ -1.97
Cdc40Q9DC48 Gm18410-201ENSMUST00000207199 577 ntBASIC2.73□□□□□ -1.97
Cdc40Q9DC48 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC2.73□□□□□ -1.97
Cdc40Q9DC48 Gm45965-201ENSMUST00000221192 1284 ntBASIC2.73□□□□□ -1.97
Cdc40Q9DC48 AC129202.2-201ENSMUST00000225123 177 ntBASIC2.73□□□□□ -1.97
Cdc40Q9DC48 AC159188.1-201ENSMUST00000225198 526 ntBASIC2.73□□□□□ -1.97
Cdc40Q9DC48 AC164116.2-201ENSMUST00000225398 1038 ntBASIC2.73□□□□□ -1.97
Cdc40Q9DC48 AC101945.3-201ENSMUST00000226568 153 ntBASIC2.73□□□□□ -1.97
Cdc40Q9DC48 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Cdc40Q9DC48 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms