Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Ccdc3Q9D6Y1 Mir466k-201ENSMUST00000116774 122 ntBASIC2.62□□□□□ -1.99
Ccdc3Q9D6Y1 Gm13329-201ENSMUST00000117063 265 ntBASIC2.62□□□□□ -1.99
Ccdc3Q9D6Y1 Gm14877-201ENSMUST00000119803 478 ntBASIC2.62□□□□□ -1.99
Ccdc3Q9D6Y1 Gm15488-201ENSMUST00000121682 670 ntBASIC2.62□□□□□ -1.99
Ccdc3Q9D6Y1 Gm24592-201ENSMUST00000122505 106 ntBASIC2.62□□□□□ -1.99
Ccdc3Q9D6Y1 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC2.62□□□□□ -1.99
Ccdc3Q9D6Y1 Gm13901-201ENSMUST00000137252 468 ntBASIC2.62□□□□□ -1.99
Ccdc3Q9D6Y1 Gm23409-201ENSMUST00000158516 237 ntBASIC2.62□□□□□ -1.99
Ccdc3Q9D6Y1 Gm22664-201ENSMUST00000158719 105 ntBASIC2.62□□□□□ -1.99
Ccdc3Q9D6Y1 Gm5967-201ENSMUST00000172723 494 ntBASIC2.62□□□□□ -1.99
Ccdc3Q9D6Y1 Gm22858-201ENSMUST00000174972 76 ntBASIC2.62□□□□□ -1.99
Ccdc3Q9D6Y1 Gm22853-201ENSMUST00000174974 131 ntBASIC2.62□□□□□ -1.99
Ccdc3Q9D6Y1 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
Ccdc3Q9D6Y1 Gm25944-201ENSMUST00000178758 94 ntBASIC2.62□□□□□ -1.99
Ccdc3Q9D6Y1 Gm27527-201ENSMUST00000183903 99 ntBASIC2.62□□□□□ -1.99
Ccdc3Q9D6Y1 Mir6405-201ENSMUST00000184584 124 ntBASIC2.62□□□□□ -1.99
Ccdc3Q9D6Y1 Gm19694-201ENSMUST00000192364 505 ntBASIC2.62□□□□□ -1.99
Ccdc3Q9D6Y1 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Ccdc3Q9D6Y1 Crs-ps-201ENSMUST00000203723 760 ntBASIC2.62□□□□□ -1.99
Ccdc3Q9D6Y1 Gm17838-201ENSMUST00000205872 876 ntBASIC2.62□□□□□ -1.99
Ccdc3Q9D6Y1 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC2.62□□□□□ -1.99
Ccdc3Q9D6Y1 Gm45072-201ENSMUST00000208673 929 ntBASIC2.62□□□□□ -1.99
Ccdc3Q9D6Y1 Gm45551-201ENSMUST00000211459 928 ntBASIC2.62□□□□□ -1.99
Ccdc3Q9D6Y1 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Ccdc3Q9D6Y1 AC132260.2-201ENSMUST00000224482 344 ntBASIC2.62□□□□□ -1.99
Ccdc3Q9D6Y1 Mir878-201ENSMUST00000104680 78 ntBASIC2.61□□□□□ -1.99
Ccdc3Q9D6Y1 Gm11367-201ENSMUST00000117802 120 ntBASIC2.61□□□□□ -1.99
Ccdc3Q9D6Y1 Gm16171-201ENSMUST00000118004 324 ntBASIC2.61□□□□□ -1.99
Ccdc3Q9D6Y1 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC2.61□□□□□ -1.99
Ccdc3Q9D6Y1 Gm14627-201ENSMUST00000118931 567 ntBASIC2.61□□□□□ -1.99
Ccdc3Q9D6Y1 Gm13359-201ENSMUST00000119000 695 ntBASIC2.61□□□□□ -1.99
Ccdc3Q9D6Y1 Gm12137-201ENSMUST00000119565 346 ntBASIC2.61□□□□□ -1.99
Ccdc3Q9D6Y1 Gm11693-201ENSMUST00000119625 565 ntBASIC2.61□□□□□ -1.99
Ccdc3Q9D6Y1 Gm13487-201ENSMUST00000122240 864 ntBASIC2.61□□□□□ -1.99
Ccdc3Q9D6Y1 Gm22478-201ENSMUST00000122570 154 ntBASIC2.61□□□□□ -1.99
Ccdc3Q9D6Y1 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC2.61□□□□□ -1.99
Ccdc3Q9D6Y1 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC2.61□□□□□ -1.99
Ccdc3Q9D6Y1 Gm24736-201ENSMUST00000158862 130 ntBASIC2.61□□□□□ -1.99
Ccdc3Q9D6Y1 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Ccdc3Q9D6Y1 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Ccdc3Q9D6Y1 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Ccdc3Q9D6Y1 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Ccdc3Q9D6Y1 Gm27921-201ENSMUST00000183968 108 ntBASIC2.61□□□□□ -1.99
Ccdc3Q9D6Y1 Gm27698-201ENSMUST00000184060 249 ntBASIC2.61□□□□□ -1.99
Ccdc3Q9D6Y1 Gm28900-201ENSMUST00000185232 156 ntBASIC2.61□□□□□ -1.99
Ccdc3Q9D6Y1 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Ccdc3Q9D6Y1 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
Ccdc3Q9D6Y1 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
Ccdc3Q9D6Y1 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC2.61□□□□□ -1.99
Ccdc3Q9D6Y1 AC156952.1-201ENSMUST00000220361 793 ntBASIC2.61□□□□□ -1.99
Ccdc3Q9D6Y1 AC154576.2-202ENSMUST00000223916 688 ntBASIC2.61□□□□□ -1.99
Ccdc3Q9D6Y1 AC126275.1-201ENSMUST00000224881 446 ntBASIC2.61□□□□□ -1.99
Ccdc3Q9D6Y1 AC118639.1-201ENSMUST00000227204 338 ntBASIC2.61□□□□□ -1.99
Ccdc3Q9D6Y1 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Ccdc3Q9D6Y1 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Ccdc3Q9D6Y1 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Ccdc3Q9D6Y1 Gm20345-201ENSMUST00000175839 2414 ntBASIC2.61□□□□□ -1.99
Ccdc3Q9D6Y1 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Ccdc3Q9D6Y1 Gm42701-201ENSMUST00000196117 1657 ntBASIC2.6□□□□□ -1.99
Ccdc3Q9D6Y1 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Ccdc3Q9D6Y1 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Ccdc3Q9D6Y1 Gm22072-201ENSMUST00000116850 121 ntBASIC2.6□□□□□ -1.99
Ccdc3Q9D6Y1 Gm11356-201ENSMUST00000118974 192 ntBASIC2.6□□□□□ -1.99
Ccdc3Q9D6Y1 Gm12313-201ENSMUST00000121347 421 ntBASIC2.6□□□□□ -1.99
Ccdc3Q9D6Y1 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC2.6□□□□□ -1.99
Ccdc3Q9D6Y1 Gm23470-201ENSMUST00000157129 120 ntBASIC2.6□□□□□ -1.99
Ccdc3Q9D6Y1 Gm24291-201ENSMUST00000157633 162 ntBASIC2.6□□□□□ -1.99
Ccdc3Q9D6Y1 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
Ccdc3Q9D6Y1 Gm4468-201ENSMUST00000170206 294 ntBASIC2.6□□□□□ -1.99
Ccdc3Q9D6Y1 Mir5118-201ENSMUST00000175551 67 ntBASIC2.6□□□□□ -1.99
Ccdc3Q9D6Y1 Gm27330-201ENSMUST00000184689 132 ntBASIC2.6□□□□□ -1.99
Ccdc3Q9D6Y1 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC2.6□□□□□ -1.99
Ccdc3Q9D6Y1 Gm44727-201ENSMUST00000204225 451 ntBASIC2.6□□□□□ -1.99
Ccdc3Q9D6Y1 Gm45316-201ENSMUST00000210128 162 ntBASIC2.6□□□□□ -1.99
Ccdc3Q9D6Y1 Gm7751-201ENSMUST00000212868 709 ntBASIC2.6□□□□□ -1.99
Ccdc3Q9D6Y1 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC2.6□□□□□ -1.99
Ccdc3Q9D6Y1 AC134254.5-201ENSMUST00000223436 400 ntBASIC2.6□□□□□ -1.99
Ccdc3Q9D6Y1 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC2.6□□□□□ -1.99
Ccdc3Q9D6Y1 CT025579.1-201ENSMUST00000223779 366 ntBASIC2.6□□□□□ -1.99
Ccdc3Q9D6Y1 Gm26458-201ENSMUST00000082832 128 ntBASIC2.6□□□□□ -1.99
Ccdc3Q9D6Y1 Gm22622-201ENSMUST00000082870 129 ntBASIC2.6□□□□□ -1.99
Ccdc3Q9D6Y1 Gm26494-201ENSMUST00000083154 143 ntBASIC2.6□□□□□ -1.99
Ccdc3Q9D6Y1 Gm24493-201ENSMUST00000083805 143 ntBASIC2.6□□□□□ -1.99
Ccdc3Q9D6Y1 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Ccdc3Q9D6Y1 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
Ccdc3Q9D6Y1 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Ccdc3Q9D6Y1 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Ccdc3Q9D6Y1 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.59□□□□□ -1.99
Ccdc3Q9D6Y1 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC2.59□□□□□ -1.99
Ccdc3Q9D6Y1 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
Ccdc3Q9D6Y1 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Ccdc3Q9D6Y1 Mir682-201ENSMUST00000102281 96 ntBASIC2.59□□□□□ -1.99
Ccdc3Q9D6Y1 Gm14159-201ENSMUST00000119832 451 ntBASIC2.59□□□□□ -1.99
Ccdc3Q9D6Y1 Gm7350-201ENSMUST00000120964 636 ntBASIC2.59□□□□□ -1.99
Ccdc3Q9D6Y1 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Ccdc3Q9D6Y1 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -1.99
Ccdc3Q9D6Y1 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC2.59□□□□□ -1.99
Ccdc3Q9D6Y1 Gm9785-202ENSMUST00000144563 593 ntBASIC2.59□□□□□ -1.99
Ccdc3Q9D6Y1 Gm5958-201ENSMUST00000147698 297 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 191.7 ms