Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Ddx28Q9CWT6 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
Ddx28Q9CWT6 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Ddx28Q9CWT6 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Ddx28Q9CWT6 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Ddx28Q9CWT6 Gm43047-201ENSMUST00000200089 3460 ntBASIC3.34□□□□□ -1.88
Ddx28Q9CWT6 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
Ddx28Q9CWT6 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
Ddx28Q9CWT6 AC125532.1-201ENSMUST00000216210 2334 ntBASIC3.33□□□□□ -1.88
Ddx28Q9CWT6 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Ddx28Q9CWT6 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
Ddx28Q9CWT6 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Ddx28Q9CWT6 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC3.33□□□□□ -1.88
Ddx28Q9CWT6 Gm12814-201ENSMUST00000117091 846 ntBASIC3.33□□□□□ -1.88
Ddx28Q9CWT6 Gm14240-201ENSMUST00000120353 546 ntBASIC3.33□□□□□ -1.88
Ddx28Q9CWT6 Gm13356-201ENSMUST00000121678 335 ntBASIC3.33□□□□□ -1.88
Ddx28Q9CWT6 Gm22480-201ENSMUST00000122568 128 ntBASIC3.33□□□□□ -1.88
Ddx28Q9CWT6 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC3.33□□□□□ -1.88
Ddx28Q9CWT6 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Ddx28Q9CWT6 Gm24244-201ENSMUST00000157317 130 ntBASIC3.33□□□□□ -1.88
Ddx28Q9CWT6 Gm22561-201ENSMUST00000157331 84 ntBASIC3.33□□□□□ -1.88
Ddx28Q9CWT6 Gm22555-201ENSMUST00000157801 62 ntBASIC3.33□□□□□ -1.88
Ddx28Q9CWT6 Gm22531-201ENSMUST00000158819 140 ntBASIC3.33□□□□□ -1.88
Ddx28Q9CWT6 Gm25365-201ENSMUST00000158852 121 ntBASIC3.33□□□□□ -1.88
Ddx28Q9CWT6 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC3.33□□□□□ -1.88
Ddx28Q9CWT6 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC3.33□□□□□ -1.88
Ddx28Q9CWT6 Snord92-201ENSMUST00000175548 85 ntBASIC3.33□□□□□ -1.88
Ddx28Q9CWT6 Mir713-201ENSMUST00000178651 108 ntBASIC3.33□□□□□ -1.88
Ddx28Q9CWT6 Gm11392-201ENSMUST00000181419 710 ntBASIC3.33□□□□□ -1.88
Ddx28Q9CWT6 Gm26746-201ENSMUST00000181722 487 ntBASIC3.33□□□□□ -1.88
Ddx28Q9CWT6 Gm27648-201ENSMUST00000184315 107 ntBASIC3.33□□□□□ -1.88
Ddx28Q9CWT6 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.33□□□□□ -1.88
Ddx28Q9CWT6 Gm43704-201ENSMUST00000196164 496 ntBASIC3.33□□□□□ -1.88
Ddx28Q9CWT6 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC3.33□□□□□ -1.88
Ddx28Q9CWT6 Gm45049-201ENSMUST00000207586 591 ntBASIC3.33□□□□□ -1.88
Ddx28Q9CWT6 Gm35857-201ENSMUST00000212739 178 ntBASIC3.33□□□□□ -1.88
Ddx28Q9CWT6 Gm18703-201ENSMUST00000215318 333 ntBASIC3.33□□□□□ -1.88
Ddx28Q9CWT6 Gm2628-201ENSMUST00000218019 426 ntBASIC3.33□□□□□ -1.88
Ddx28Q9CWT6 Gm3829-201ENSMUST00000222362 619 ntBASIC3.33□□□□□ -1.88
Ddx28Q9CWT6 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Ddx28Q9CWT6 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
Ddx28Q9CWT6 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Ddx28Q9CWT6 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Ddx28Q9CWT6 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Gm26418-201ENSMUST00000104275 137 ntBASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Gm15613-201ENSMUST00000118396 326 ntBASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Gm14793-201ENSMUST00000118739 311 ntBASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Gm14292-201ENSMUST00000118761 456 ntBASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Gm14101-201ENSMUST00000121502 473 ntBASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Gm15038-201ENSMUST00000122144 296 ntBASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Gm25292-201ENSMUST00000122797 322 ntBASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Mup-ps12-201ENSMUST00000126217 549 ntBASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Gm22793-201ENSMUST00000157227 330 ntBASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Gm22076-201ENSMUST00000158601 84 ntBASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Mir3066-201ENSMUST00000175296 83 ntBASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Gm19498-201ENSMUST00000191128 331 ntBASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Gm38044-201ENSMUST00000192964 487 ntBASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Gm37239-201ENSMUST00000193510 141 ntBASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Gm37495-201ENSMUST00000194590 264 ntBASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Gm37290-201ENSMUST00000195775 339 ntBASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Gm44475-201ENSMUST00000204041 424 ntBASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Gm45379-201ENSMUST00000211772 549 ntBASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Gm9068-201ENSMUST00000217393 455 ntBASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 AC154329.2-201ENSMUST00000225257 383 ntBASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 CT030238.4-201ENSMUST00000228579 801 ntBASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Gm22740-201ENSMUST00000083439 109 ntBASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Mir19a-201ENSMUST00000083482 82 ntBASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Gm8074-201ENSMUST00000095071 252 ntBASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Gm44527-202ENSMUST00000204519 1314 ntBASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC3.32□□□□□ -1.88
Ddx28Q9CWT6 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms