Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim11Q99PQ2 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Trim11Q99PQ2 Gm43185-201ENSMUST00000197507 2775 ntBASIC5.27□□□□□ -1.57
Trim11Q99PQ2 Gm37461-201ENSMUST00000193929 3704 ntBASIC5.27□□□□□ -1.57
Trim11Q99PQ2 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Trim11Q99PQ2 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC5.27□□□□□ -1.57
Trim11Q99PQ2 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim11Q99PQ2 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC5.27□□□□□ -1.57
Trim11Q99PQ2 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim11Q99PQ2 n-R5s16-201ENSMUST00000104555 119 ntBASIC5.27□□□□□ -1.57
Trim11Q99PQ2 Gm15297-201ENSMUST00000117795 290 ntBASIC5.27□□□□□ -1.57
Trim11Q99PQ2 Gm15951-201ENSMUST00000118377 400 ntBASIC5.27□□□□□ -1.57
Trim11Q99PQ2 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC5.27□□□□□ -1.57
Trim11Q99PQ2 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC5.27□□□□□ -1.57
Trim11Q99PQ2 Gm24501-201ENSMUST00000158452 62 ntBASIC5.27□□□□□ -1.57
Trim11Q99PQ2 Gm8114-201ENSMUST00000172225 484 ntBASIC5.27□□□□□ -1.57
Trim11Q99PQ2 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC5.27□□□□□ -1.57
Trim11Q99PQ2 Gm25956-201ENSMUST00000175115 217 ntBASIC5.27□□□□□ -1.57
Trim11Q99PQ2 Mir3112-201ENSMUST00000175431 82 ntBASIC5.27□□□□□ -1.57
Trim11Q99PQ2 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim11Q99PQ2 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Trim11Q99PQ2 Gm37701-201ENSMUST00000192947 1100 ntBASIC5.27□□□□□ -1.57
Trim11Q99PQ2 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC5.27□□□□□ -1.57
Trim11Q99PQ2 Gm32308-201ENSMUST00000203053 280 ntBASIC5.27□□□□□ -1.57
Trim11Q99PQ2 Gm43896-201ENSMUST00000203440 2032 ntBASIC5.27□□□□□ -1.57
Trim11Q99PQ2 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC5.27□□□□□ -1.57
Trim11Q99PQ2 AC125374.2-201ENSMUST00000214278 162 ntBASIC5.27□□□□□ -1.57
Trim11Q99PQ2 AC158803.3-201ENSMUST00000220024 211 ntBASIC5.27□□□□□ -1.57
Trim11Q99PQ2 Gm46993-201ENSMUST00000220708 259 ntBASIC5.27□□□□□ -1.57
Trim11Q99PQ2 AC091783.4-201ENSMUST00000224940 611 ntBASIC5.27□□□□□ -1.57
Trim11Q99PQ2 AC154618.1-201ENSMUST00000227451 303 ntBASIC5.27□□□□□ -1.57
Trim11Q99PQ2 Gm23845-201ENSMUST00000083834 152 ntBASIC5.27□□□□□ -1.57
Trim11Q99PQ2 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim11Q99PQ2 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Trim11Q99PQ2 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim11Q99PQ2 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Trim11Q99PQ2 AC152981.1-201ENSMUST00000218320 2480 ntBASIC5.26□□□□□ -1.57
Trim11Q99PQ2 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Trim11Q99PQ2 Neat1-201ENSMUST00000173672 20771 ntBASIC5.26□□□□□ -1.57
Trim11Q99PQ2 AC123705.2-201ENSMUST00000221653 2009 ntBASIC5.26□□□□□ -1.57
Trim11Q99PQ2 AC144772.3-201ENSMUST00000228829 3126 ntBASIC5.26□□□□□ -1.57
Trim11Q99PQ2 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Trim11Q99PQ2 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
Trim11Q99PQ2 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Trim11Q99PQ2 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Trim11Q99PQ2 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Trim11Q99PQ2 Gm36931-201ENSMUST00000192997 4801 ntBASIC5.26□□□□□ -1.57
Trim11Q99PQ2 AC113059.3-201ENSMUST00000217423 2777 ntBASIC5.26□□□□□ -1.57
Trim11Q99PQ2 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Trim11Q99PQ2 Gm22831-201ENSMUST00000102473 109 ntBASIC5.26□□□□□ -1.57
Trim11Q99PQ2 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Trim11Q99PQ2 Gm25096-201ENSMUST00000104043 129 ntBASIC5.26□□□□□ -1.57
Trim11Q99PQ2 Gm12808-201ENSMUST00000120597 404 ntBASIC5.26□□□□□ -1.57
Trim11Q99PQ2 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC5.26□□□□□ -1.57
Trim11Q99PQ2 Gm5391-201ENSMUST00000121155 613 ntBASIC5.26□□□□□ -1.57
Trim11Q99PQ2 Gm11894-201ENSMUST00000121579 328 ntBASIC5.26□□□□□ -1.57
Trim11Q99PQ2 Gm26278-201ENSMUST00000157098 132 ntBASIC5.26□□□□□ -1.57
Trim11Q99PQ2 Gm26348-201ENSMUST00000157528 240 ntBASIC5.26□□□□□ -1.57
Trim11Q99PQ2 Gm17072-201ENSMUST00000166673 658 ntBASIC5.26□□□□□ -1.57
Trim11Q99PQ2 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC5.26□□□□□ -1.57
Trim11Q99PQ2 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Trim11Q99PQ2 Gm29350-201ENSMUST00000189141 541 ntBASIC5.26□□□□□ -1.57
Trim11Q99PQ2 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC5.26□□□□□ -1.57
Trim11Q99PQ2 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Trim11Q99PQ2 Gm45252-201ENSMUST00000211579 397 ntBASIC5.26□□□□□ -1.57
Trim11Q99PQ2 Gm45327-201ENSMUST00000211612 565 ntBASIC5.26□□□□□ -1.57
Trim11Q99PQ2 Olfr556-202ENSMUST00000213485 3825 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Trim11Q99PQ2 AC159231.1-201ENSMUST00000225365 226 ntBASIC5.26□□□□□ -1.57
Trim11Q99PQ2 AC129541.1-201ENSMUST00000226940 523 ntBASIC5.26□□□□□ -1.57
Trim11Q99PQ2 AC165138.1-201ENSMUST00000226984 270 ntBASIC5.26□□□□□ -1.57
Trim11Q99PQ2 AC123860.1-201ENSMUST00000228033 481 ntBASIC5.26□□□□□ -1.57
Trim11Q99PQ2 Gm10038-201ENSMUST00000077233 441 ntBASIC5.26□□□□□ -1.57
Trim11Q99PQ2 Snora52-201ENSMUST00000082732 137 ntBASIC5.26□□□□□ -1.57
Trim11Q99PQ2 Gm44321-201ENSMUST00000204262 2855 ntBASIC5.26□□□□□ -1.57
Trim11Q99PQ2 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Trim11Q99PQ2 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Trim11Q99PQ2 Gm12080-201ENSMUST00000119821 1883 ntBASIC5.26□□□□□ -1.57
Trim11Q99PQ2 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Trim11Q99PQ2 Gm42552-201ENSMUST00000196754 4497 ntBASIC5.25□□□□□ -1.57
Trim11Q99PQ2 Gm37397-201ENSMUST00000194579 2842 ntBASIC5.25□□□□□ -1.57
Trim11Q99PQ2 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Trim11Q99PQ2 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC5.25□□□□□ -1.57
Trim11Q99PQ2 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Trim11Q99PQ2 Gm13213-201ENSMUST00000119668 474 ntBASIC5.25□□□□□ -1.57
Trim11Q99PQ2 Hba-ps4-201ENSMUST00000128900 447 ntBASIC5.25□□□□□ -1.57
Trim11Q99PQ2 Gm23959-201ENSMUST00000157208 324 ntBASIC5.25□□□□□ -1.57
Trim11Q99PQ2 Gm22891-201ENSMUST00000158641 164 ntBASIC5.25□□□□□ -1.57
Trim11Q99PQ2 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Trim11Q99PQ2 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Trim11Q99PQ2 Gm24713-201ENSMUST00000178850 107 ntBASIC5.25□□□□□ -1.57
Trim11Q99PQ2 Gm25448-201ENSMUST00000180065 107 ntBASIC5.25□□□□□ -1.57
Trim11Q99PQ2 Gm26622-201ENSMUST00000180520 298 ntBASIC5.25□□□□□ -1.57
Trim11Q99PQ2 Gm26983-201ENSMUST00000182051 388 ntBASIC5.25□□□□□ -1.57
Trim11Q99PQ2 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC5.25□□□□□ -1.57
Trim11Q99PQ2 Mir6418-201ENSMUST00000185075 115 ntBASIC5.25□□□□□ -1.57
Trim11Q99PQ2 Gm29596-201ENSMUST00000185710 385 ntBASIC5.25□□□□□ -1.57
Trim11Q99PQ2 Gm28399-201ENSMUST00000186221 318 ntBASIC5.25□□□□□ -1.57
Trim11Q99PQ2 Gm28572-201ENSMUST00000187444 318 ntBASIC5.25□□□□□ -1.57
Trim11Q99PQ2 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Trim11Q99PQ2 Gm29365-201ENSMUST00000189461 699 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 247.2 ms