Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Mir3095-201ENSMUST00000175552 87 ntBASIC5.03□□□□□ -1.6
Rpa1Q8VEE4 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Rpa1Q8VEE4 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Rpa1Q8VEE4 AC122464.1-201ENSMUST00000202789 770 ntBASIC5.03□□□□□ -1.6
Rpa1Q8VEE4 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC5.03□□□□□ -1.6
Rpa1Q8VEE4 Olfr1285-201ENSMUST00000208523 903 ntBASIC5.03□□□□□ -1.6
Rpa1Q8VEE4 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC5.03□□□□□ -1.6
Rpa1Q8VEE4 AC166358.4-201ENSMUST00000223030 105 ntBASIC5.03□□□□□ -1.6
Rpa1Q8VEE4 LOC667541-201ENSMUST00000223408 278 ntBASIC5.03□□□□□ -1.6
Rpa1Q8VEE4 AC158395.1-201ENSMUST00000227206 452 ntBASIC5.03□□□□□ -1.6
Rpa1Q8VEE4 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Rpa1Q8VEE4 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC5.03□□□□□ -1.6
Rpa1Q8VEE4 Gm36989-201ENSMUST00000193225 2160 ntBASIC5.03□□□□□ -1.6
Rpa1Q8VEE4 Gm43654-201ENSMUST00000200664 3417 ntBASIC5.03□□□□□ -1.6
Rpa1Q8VEE4 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC5.03□□□□□ -1.6
Rpa1Q8VEE4 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Rpa1Q8VEE4 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Rpa1Q8VEE4 Gm37848-201ENSMUST00000195288 3103 ntBASIC5.03□□□□□ -1.6
Rpa1Q8VEE4 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
Rpa1Q8VEE4 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Rpa1Q8VEE4 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Rpa1Q8VEE4 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Rpa1Q8VEE4 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Rpa1Q8VEE4 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC5.02□□□□□ -1.61
Rpa1Q8VEE4 Gm24350-201ENSMUST00000104163 133 ntBASIC5.02□□□□□ -1.61
Rpa1Q8VEE4 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
Rpa1Q8VEE4 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC5.02□□□□□ -1.61
Rpa1Q8VEE4 Gm25176-201ENSMUST00000122640 125 ntBASIC5.02□□□□□ -1.61
Rpa1Q8VEE4 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC5.02□□□□□ -1.61
Rpa1Q8VEE4 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC5.02□□□□□ -1.61
Rpa1Q8VEE4 Gm6265-201ENSMUST00000149263 231 ntBASIC5.02□□□□□ -1.61
Rpa1Q8VEE4 Gm25489-201ENSMUST00000158727 141 ntBASIC5.02□□□□□ -1.61
Rpa1Q8VEE4 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
Rpa1Q8VEE4 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC5.02□□□□□ -1.61
Rpa1Q8VEE4 Mir3097-201ENSMUST00000175356 67 ntBASIC5.02□□□□□ -1.61
Rpa1Q8VEE4 Gm7958-201ENSMUST00000178255 468 ntBASIC5.02□□□□□ -1.61
Rpa1Q8VEE4 Gm7950-201ENSMUST00000179633 468 ntBASIC5.02□□□□□ -1.61
Rpa1Q8VEE4 Gm7909-201ENSMUST00000182688 614 ntBASIC5.02□□□□□ -1.61
Rpa1Q8VEE4 Gm27803-201ENSMUST00000183763 119 ntBASIC5.02□□□□□ -1.61
Rpa1Q8VEE4 Gm37601-201ENSMUST00000194922 394 ntBASIC5.02□□□□□ -1.61
Rpa1Q8VEE4 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC5.02□□□□□ -1.61
Rpa1Q8VEE4 Gm43529-201ENSMUST00000199178 412 ntBASIC5.02□□□□□ -1.61
Rpa1Q8VEE4 Gm5876-201ENSMUST00000203735 243 ntBASIC5.02□□□□□ -1.61
Rpa1Q8VEE4 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC5.02□□□□□ -1.61
Rpa1Q8VEE4 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC5.02□□□□□ -1.61
Rpa1Q8VEE4 Gm45879-201ENSMUST00000212521 392 ntBASIC5.02□□□□□ -1.61
Rpa1Q8VEE4 AC123832.2-201ENSMUST00000215151 129 ntBASIC5.02□□□□□ -1.61
Rpa1Q8VEE4 CT030182.3-201ENSMUST00000225986 582 ntBASIC5.02□□□□□ -1.61
Rpa1Q8VEE4 CT030238.1-201ENSMUST00000228393 442 ntBASIC5.02□□□□□ -1.61
Rpa1Q8VEE4 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Rpa1Q8VEE4 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Rpa1Q8VEE4 n-R5s215-201ENSMUST00000082480 104 ntBASIC5.02□□□□□ -1.61
Rpa1Q8VEE4 Gm25139-201ENSMUST00000083247 210 ntBASIC5.02□□□□□ -1.61
Rpa1Q8VEE4 Gm23041-201ENSMUST00000083868 106 ntBASIC5.02□□□□□ -1.61
Rpa1Q8VEE4 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Rpa1Q8VEE4 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
Rpa1Q8VEE4 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Rpa1Q8VEE4 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Rpa1Q8VEE4 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
Rpa1Q8VEE4 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
Rpa1Q8VEE4 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Rpa1Q8VEE4 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
Rpa1Q8VEE4 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
Rpa1Q8VEE4 Ankrd28-204ENSMUST00000227089 3522 ntBASIC5.01□□□□□ -1.61
Rpa1Q8VEE4 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC5.01□□□□□ -1.61
Rpa1Q8VEE4 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Rpa1Q8VEE4 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC5.01□□□□□ -1.61
Rpa1Q8VEE4 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC5.01□□□□□ -1.61
Rpa1Q8VEE4 Gm13692-201ENSMUST00000120774 371 ntBASIC5.01□□□□□ -1.61
Rpa1Q8VEE4 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC5.01□□□□□ -1.61
Rpa1Q8VEE4 Gm27723-201ENSMUST00000157398 63 ntBASIC5.01□□□□□ -1.61
Rpa1Q8VEE4 Nron-204ENSMUST00000158971 370 ntBASIC5.01□□□□□ -1.61
Rpa1Q8VEE4 Gm25749-201ENSMUST00000175485 111 ntBASIC5.01□□□□□ -1.61
Rpa1Q8VEE4 Gm23450-201ENSMUST00000178285 91 ntBASIC5.01□□□□□ -1.61
Rpa1Q8VEE4 Gm24264-201ENSMUST00000179835 94 ntBASIC5.01□□□□□ -1.61
Rpa1Q8VEE4 Mir6335-201ENSMUST00000184081 98 ntBASIC5.01□□□□□ -1.61
Rpa1Q8VEE4 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Rpa1Q8VEE4 Gm38020-201ENSMUST00000193066 4676 ntBASIC5.01□□□□□ -1.61
Rpa1Q8VEE4 Gm38060-201ENSMUST00000194822 464 ntBASIC5.01□□□□□ -1.61
Rpa1Q8VEE4 Gm29813-201ENSMUST00000195856 447 ntBASIC5.01□□□□□ -1.61
Rpa1Q8VEE4 Gm44485-201ENSMUST00000199569 137 ntBASIC5.01□□□□□ -1.61
Rpa1Q8VEE4 Gm43955-201ENSMUST00000204332 142 ntBASIC5.01□□□□□ -1.61
Rpa1Q8VEE4 Gm44977-201ENSMUST00000205283 420 ntBASIC5.01□□□□□ -1.61
Rpa1Q8VEE4 AC153553.1-201ENSMUST00000218257 684 ntBASIC5.01□□□□□ -1.61
Rpa1Q8VEE4 AC154840.1-201ENSMUST00000225216 408 ntBASIC5.01□□□□□ -1.61
Rpa1Q8VEE4 Gm22571-201ENSMUST00000082984 70 ntBASIC5.01□□□□□ -1.61
Rpa1Q8VEE4 Mir199a-2-201ENSMUST00000093618 110 ntBASIC5.01□□□□□ -1.61
Rpa1Q8VEE4 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Rpa1Q8VEE4 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Rpa1Q8VEE4 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Rpa1Q8VEE4 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Rpa1Q8VEE4 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Rpa1Q8VEE4 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Rpa1Q8VEE4 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Rpa1Q8VEE4 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Rpa1Q8VEE4 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC5.01□□□□□ -1.61
Rpa1Q8VEE4 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC5.01□□□□□ -1.61
Rpa1Q8VEE4 Gm21032-201ENSMUST00000208108 2578 ntBASIC5.01□□□□□ -1.61
Rpa1Q8VEE4 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Rpa1Q8VEE4 CT025577.1-201ENSMUST00000220862 2846 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 105.7 ms