Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm16274-201ENSMUST00000139251 592 ntBASIC3.82□□□□□ -1.8
Nup88Q8CEC0 Gm22561-201ENSMUST00000157331 84 ntBASIC3.82□□□□□ -1.8
Nup88Q8CEC0 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.82□□□□□ -1.8
Nup88Q8CEC0 Gm20915-201ENSMUST00000191575 663 ntBASIC3.82□□□□□ -1.8
Nup88Q8CEC0 Gm45860-201ENSMUST00000212700 334 ntBASIC3.82□□□□□ -1.8
Nup88Q8CEC0 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.82□□□□□ -1.8
Nup88Q8CEC0 AC167977.1-201ENSMUST00000221384 234 ntBASIC3.82□□□□□ -1.8
Nup88Q8CEC0 AC161758.1-201ENSMUST00000226123 310 ntBASIC3.82□□□□□ -1.8
Nup88Q8CEC0 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Nup88Q8CEC0 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Nup88Q8CEC0 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.82□□□□□ -1.8
Nup88Q8CEC0 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Nup88Q8CEC0 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Nup88Q8CEC0 Gm36969-201ENSMUST00000194551 2809 ntBASIC3.81□□□□□ -1.8
Nup88Q8CEC0 Gm43665-201ENSMUST00000198672 1659 ntBASIC3.81□□□□□ -1.8
Nup88Q8CEC0 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Nup88Q8CEC0 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Nup88Q8CEC0 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Nup88Q8CEC0 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Nup88Q8CEC0 Gm11598-201ENSMUST00000119257 357 ntBASIC3.81□□□□□ -1.8
Nup88Q8CEC0 Gm13419-201ENSMUST00000121711 271 ntBASIC3.81□□□□□ -1.8
Nup88Q8CEC0 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC3.81□□□□□ -1.8
Nup88Q8CEC0 Gm22036-201ENSMUST00000157279 215 ntBASIC3.81□□□□□ -1.8
Nup88Q8CEC0 Gm25666-201ENSMUST00000157702 107 ntBASIC3.81□□□□□ -1.8
Nup88Q8CEC0 Gm26271-201ENSMUST00000158349 104 ntBASIC3.81□□□□□ -1.8
Nup88Q8CEC0 Gm17377-201ENSMUST00000165184 207 ntBASIC3.81□□□□□ -1.8
Nup88Q8CEC0 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC3.81□□□□□ -1.8
Nup88Q8CEC0 Gm7909-201ENSMUST00000182688 614 ntBASIC3.81□□□□□ -1.8
Nup88Q8CEC0 Gm18448-201ENSMUST00000186286 599 ntBASIC3.81□□□□□ -1.8
Nup88Q8CEC0 Gm17929-201ENSMUST00000186851 627 ntBASIC3.81□□□□□ -1.8
Nup88Q8CEC0 Gm29045-201ENSMUST00000187278 698 ntBASIC3.81□□□□□ -1.8
Nup88Q8CEC0 Gm28785-201ENSMUST00000187478 379 ntBASIC3.81□□□□□ -1.8
Nup88Q8CEC0 Gm7652-201ENSMUST00000200440 1151 ntBASIC3.81□□□□□ -1.8
Nup88Q8CEC0 Gm44282-201ENSMUST00000203199 190 ntBASIC3.81□□□□□ -1.8
Nup88Q8CEC0 Gm44449-201ENSMUST00000203610 153 ntBASIC3.81□□□□□ -1.8
Nup88Q8CEC0 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.81□□□□□ -1.8
Nup88Q8CEC0 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Nup88Q8CEC0 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Nup88Q8CEC0 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Nup88Q8CEC0 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Nup88Q8CEC0 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Nup88Q8CEC0 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Nup88Q8CEC0 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Nup88Q8CEC0 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Nup88Q8CEC0 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Nup88Q8CEC0 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Nup88Q8CEC0 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Nup88Q8CEC0 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Nup88Q8CEC0 Gm25376-201ENSMUST00000104340 133 ntBASIC3.8□□□□□ -1.8
Nup88Q8CEC0 Gm22023-201ENSMUST00000104354 130 ntBASIC3.8□□□□□ -1.8
Nup88Q8CEC0 Gm13454-201ENSMUST00000118166 483 ntBASIC3.8□□□□□ -1.8
Nup88Q8CEC0 Gm11219-201ENSMUST00000118565 358 ntBASIC3.8□□□□□ -1.8
Nup88Q8CEC0 Gm6762-201ENSMUST00000121769 289 ntBASIC3.8□□□□□ -1.8
Nup88Q8CEC0 Gm22985-201ENSMUST00000122754 116 ntBASIC3.8□□□□□ -1.8
Nup88Q8CEC0 Mup-ps12-201ENSMUST00000126217 549 ntBASIC3.8□□□□□ -1.8
Nup88Q8CEC0 Gm23505-201ENSMUST00000158989 130 ntBASIC3.8□□□□□ -1.8
Nup88Q8CEC0 Gm4479-201ENSMUST00000178807 171 ntBASIC3.8□□□□□ -1.8
Nup88Q8CEC0 Gm23648-201ENSMUST00000180301 107 ntBASIC3.8□□□□□ -1.8
Nup88Q8CEC0 Gm28002-201ENSMUST00000184832 100 ntBASIC3.8□□□□□ -1.8
Nup88Q8CEC0 Gm29104-201ENSMUST00000186304 222 ntBASIC3.8□□□□□ -1.8
Nup88Q8CEC0 Gm28594-201ENSMUST00000187022 661 ntBASIC3.8□□□□□ -1.8
Nup88Q8CEC0 Gm28384-201ENSMUST00000189079 463 ntBASIC3.8□□□□□ -1.8
Nup88Q8CEC0 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC3.8□□□□□ -1.8
Nup88Q8CEC0 Gm37732-201ENSMUST00000194377 316 ntBASIC3.8□□□□□ -1.8
Nup88Q8CEC0 Gm5551-201ENSMUST00000199720 690 ntBASIC3.8□□□□□ -1.8
Nup88Q8CEC0 Gm18691-201ENSMUST00000203593 872 ntBASIC3.8□□□□□ -1.8
Nup88Q8CEC0 Gm44061-201ENSMUST00000203962 1195 ntBASIC3.8□□□□□ -1.8
Nup88Q8CEC0 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC3.8□□□□□ -1.8
Nup88Q8CEC0 Gm8423-201ENSMUST00000211387 607 ntBASIC3.8□□□□□ -1.8
Nup88Q8CEC0 Gm45878-201ENSMUST00000211839 241 ntBASIC3.8□□□□□ -1.8
Nup88Q8CEC0 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC3.8□□□□□ -1.8
Nup88Q8CEC0 AC155923.1-201ENSMUST00000215676 356 ntBASIC3.8□□□□□ -1.8
Nup88Q8CEC0 AC157017.2-201ENSMUST00000218354 777 ntBASIC3.8□□□□□ -1.8
Nup88Q8CEC0 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC3.8□□□□□ -1.8
Nup88Q8CEC0 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC3.8□□□□□ -1.8
Nup88Q8CEC0 AC121966.1-201ENSMUST00000221458 282 ntBASIC3.8□□□□□ -1.8
Nup88Q8CEC0 AC117814.1-201ENSMUST00000226135 352 ntBASIC3.8□□□□□ -1.8
Nup88Q8CEC0 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Nup88Q8CEC0 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Nup88Q8CEC0 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Nup88Q8CEC0 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Nup88Q8CEC0 Gm23506-201ENSMUST00000083077 107 ntBASIC3.8□□□□□ -1.8
Nup88Q8CEC0 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Nup88Q8CEC0 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Nup88Q8CEC0 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Nup88Q8CEC0 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
Nup88Q8CEC0 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Nup88Q8CEC0 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Nup88Q8CEC0 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Nup88Q8CEC0 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Nup88Q8CEC0 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC3.79□□□□□ -1.8
Nup88Q8CEC0 Mir190b-201ENSMUST00000104803 80 ntBASIC3.79□□□□□ -1.8
Nup88Q8CEC0 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Nup88Q8CEC0 Mir1198-201ENSMUST00000116995 121 ntBASIC3.79□□□□□ -1.8
Nup88Q8CEC0 Gm15312-201ENSMUST00000118827 271 ntBASIC3.79□□□□□ -1.8
Nup88Q8CEC0 Gm11693-201ENSMUST00000119625 565 ntBASIC3.79□□□□□ -1.8
Nup88Q8CEC0 Gm15037-201ENSMUST00000120358 259 ntBASIC3.79□□□□□ -1.8
Nup88Q8CEC0 Gm15142-201ENSMUST00000121013 856 ntBASIC3.79□□□□□ -1.8
Nup88Q8CEC0 Gm15309-201ENSMUST00000121644 240 ntBASIC3.79□□□□□ -1.8
Nup88Q8CEC0 Gm25334-201ENSMUST00000158036 110 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms