Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gm29448-201ENSMUST00000186675 615 ntBASIC3.73□□□□□ -1.81
Atg4aQ8C9S8 Gm29314-201ENSMUST00000186800 615 ntBASIC3.73□□□□□ -1.81
Atg4aQ8C9S8 Gm28253-202ENSMUST00000187971 615 ntBASIC3.73□□□□□ -1.81
Atg4aQ8C9S8 Gm29169-201ENSMUST00000189835 615 ntBASIC3.73□□□□□ -1.81
Atg4aQ8C9S8 Gm43556-201ENSMUST00000196186 681 ntBASIC3.73□□□□□ -1.81
Atg4aQ8C9S8 Gm42465-201ENSMUST00000197036 492 ntBASIC3.73□□□□□ -1.81
Atg4aQ8C9S8 Ighv1-68-201ENSMUST00000198789 294 ntBASIC3.73□□□□□ -1.81
Atg4aQ8C9S8 Gm42828-201ENSMUST00000199669 469 ntBASIC3.73□□□□□ -1.81
Atg4aQ8C9S8 Gm44118-201ENSMUST00000204665 229 ntBASIC3.73□□□□□ -1.81
Atg4aQ8C9S8 Gm7726-201ENSMUST00000206241 231 ntBASIC3.73□□□□□ -1.81
Atg4aQ8C9S8 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC3.73□□□□□ -1.81
Atg4aQ8C9S8 AC138667.2-201ENSMUST00000224880 598 ntBASIC3.73□□□□□ -1.81
Atg4aQ8C9S8 AC154640.2-201ENSMUST00000226324 472 ntBASIC3.73□□□□□ -1.81
Atg4aQ8C9S8 Gm24622-201ENSMUST00000082619 162 ntBASIC3.73□□□□□ -1.81
Atg4aQ8C9S8 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Atg4aQ8C9S8 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Atg4aQ8C9S8 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.73□□□□□ -1.81
Atg4aQ8C9S8 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Atg4aQ8C9S8 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Atg4aQ8C9S8 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC3.72□□□□□ -1.81
Atg4aQ8C9S8 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC3.72□□□□□ -1.81
Atg4aQ8C9S8 Gm13717-201ENSMUST00000119868 365 ntBASIC3.72□□□□□ -1.81
Atg4aQ8C9S8 Gm23791-201ENSMUST00000122553 293 ntBASIC3.72□□□□□ -1.81
Atg4aQ8C9S8 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC3.72□□□□□ -1.81
Atg4aQ8C9S8 Gm22733-201ENSMUST00000158094 91 ntBASIC3.72□□□□□ -1.81
Atg4aQ8C9S8 Gm23352-201ENSMUST00000158428 64 ntBASIC3.72□□□□□ -1.81
Atg4aQ8C9S8 Gm9593-201ENSMUST00000166034 469 ntBASIC3.72□□□□□ -1.81
Atg4aQ8C9S8 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.72□□□□□ -1.81
Atg4aQ8C9S8 Gm18505-201ENSMUST00000187360 790 ntBASIC3.72□□□□□ -1.81
Atg4aQ8C9S8 Gm28597-201ENSMUST00000187664 666 ntBASIC3.72□□□□□ -1.81
Atg4aQ8C9S8 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Atg4aQ8C9S8 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Atg4aQ8C9S8 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC3.72□□□□□ -1.81
Atg4aQ8C9S8 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC3.72□□□□□ -1.81
Atg4aQ8C9S8 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC3.72□□□□□ -1.81
Atg4aQ8C9S8 Gm44157-201ENSMUST00000204720 410 ntBASIC3.72□□□□□ -1.81
Atg4aQ8C9S8 Gm6112-201ENSMUST00000208037 629 ntBASIC3.72□□□□□ -1.81
Atg4aQ8C9S8 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC3.72□□□□□ -1.81
Atg4aQ8C9S8 Gm45439-201ENSMUST00000211723 359 ntBASIC3.72□□□□□ -1.81
Atg4aQ8C9S8 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC3.72□□□□□ -1.81
Atg4aQ8C9S8 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC3.72□□□□□ -1.81
Atg4aQ8C9S8 Gm18228-201ENSMUST00000217297 1091 ntBASIC3.72□□□□□ -1.81
Atg4aQ8C9S8 AC161758.1-201ENSMUST00000226123 310 ntBASIC3.72□□□□□ -1.81
Atg4aQ8C9S8 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Atg4aQ8C9S8 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Atg4aQ8C9S8 Gm6462-201ENSMUST00000081488 304 ntBASIC3.72□□□□□ -1.81
Atg4aQ8C9S8 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Atg4aQ8C9S8 Gm25126-201ENSMUST00000083343 102 ntBASIC3.72□□□□□ -1.81
Atg4aQ8C9S8 Mir323-201ENSMUST00000083683 86 ntBASIC3.72□□□□□ -1.81
Atg4aQ8C9S8 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
Atg4aQ8C9S8 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Atg4aQ8C9S8 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Atg4aQ8C9S8 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Atg4aQ8C9S8 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Atg4aQ8C9S8 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Atg4aQ8C9S8 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
Atg4aQ8C9S8 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.81
Atg4aQ8C9S8 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC3.71□□□□□ -1.81
Atg4aQ8C9S8 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.71□□□□□ -1.81
Atg4aQ8C9S8 Gm14981-201ENSMUST00000117325 943 ntBASIC3.71□□□□□ -1.82
Atg4aQ8C9S8 Gm15094-201ENSMUST00000118394 1131 ntBASIC3.71□□□□□ -1.82
Atg4aQ8C9S8 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.71□□□□□ -1.82
Atg4aQ8C9S8 Gm22322-201ENSMUST00000157151 111 ntBASIC3.71□□□□□ -1.82
Atg4aQ8C9S8 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC3.71□□□□□ -1.82
Atg4aQ8C9S8 Gm27845-201ENSMUST00000184479 114 ntBASIC3.71□□□□□ -1.82
Atg4aQ8C9S8 Gm37111-201ENSMUST00000193250 634 ntBASIC3.71□□□□□ -1.82
Atg4aQ8C9S8 Gm18384-201ENSMUST00000195974 808 ntBASIC3.71□□□□□ -1.82
Atg4aQ8C9S8 Gm38395-201ENSMUST00000199904 830 ntBASIC3.71□□□□□ -1.82
Atg4aQ8C9S8 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC3.71□□□□□ -1.82
Atg4aQ8C9S8 Gm44964-201ENSMUST00000207011 273 ntBASIC3.71□□□□□ -1.82
Atg4aQ8C9S8 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC3.71□□□□□ -1.82
Atg4aQ8C9S8 AC239878.1-201ENSMUST00000224212 506 ntBASIC3.71□□□□□ -1.82
Atg4aQ8C9S8 AC129208.2-201ENSMUST00000228506 320 ntBASIC3.71□□□□□ -1.82
Atg4aQ8C9S8 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Atg4aQ8C9S8 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Atg4aQ8C9S8 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.71□□□□□ -1.82
Atg4aQ8C9S8 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.71□□□□□ -1.82
Atg4aQ8C9S8 Gm45483-201ENSMUST00000209845 1682 ntBASIC3.71□□□□□ -1.82
Atg4aQ8C9S8 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Atg4aQ8C9S8 Gm13340-201ENSMUST00000117219 1545 ntBASIC3.7□□□□□ -1.82
Atg4aQ8C9S8 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Atg4aQ8C9S8 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC3.7□□□□□ -1.82
Atg4aQ8C9S8 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
Atg4aQ8C9S8 Gm25876-201ENSMUST00000104329 119 ntBASIC3.7□□□□□ -1.82
Atg4aQ8C9S8 Mir883a-201ENSMUST00000104824 76 ntBASIC3.7□□□□□ -1.82
Atg4aQ8C9S8 Gm14973-201ENSMUST00000117248 255 ntBASIC3.7□□□□□ -1.82
Atg4aQ8C9S8 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Atg4aQ8C9S8 Gm15176-201ENSMUST00000117734 135 ntBASIC3.7□□□□□ -1.82
Atg4aQ8C9S8 Defa-ps5-201ENSMUST00000121541 279 ntBASIC3.7□□□□□ -1.82
Atg4aQ8C9S8 Gm23429-201ENSMUST00000122486 149 ntBASIC3.7□□□□□ -1.82
Atg4aQ8C9S8 Gm8289-201ENSMUST00000144814 1182 ntBASIC3.7□□□□□ -1.82
Atg4aQ8C9S8 Gm25334-201ENSMUST00000158036 110 ntBASIC3.7□□□□□ -1.82
Atg4aQ8C9S8 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Atg4aQ8C9S8 Gm23379-201ENSMUST00000180026 107 ntBASIC3.7□□□□□ -1.82
Atg4aQ8C9S8 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC3.7□□□□□ -1.82
Atg4aQ8C9S8 Gm8023-201ENSMUST00000195298 903 ntBASIC3.7□□□□□ -1.82
Atg4aQ8C9S8 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC3.7□□□□□ -1.82
Atg4aQ8C9S8 Gm42438-201ENSMUST00000197832 974 ntBASIC3.7□□□□□ -1.82
Atg4aQ8C9S8 Gm43746-201ENSMUST00000200028 317 ntBASIC3.7□□□□□ -1.82
Atg4aQ8C9S8 Gm44059-201ENSMUST00000204048 351 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms