Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Usp40Q8BWR4 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Usp40Q8BWR4 Gm25671-201ENSMUST00000178612 105 ntBASIC5.34□□□□□ -1.55
Usp40Q8BWR4 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Usp40Q8BWR4 Gm23307-201ENSMUST00000179167 105 ntBASIC5.34□□□□□ -1.55
Usp40Q8BWR4 Gm25286-201ENSMUST00000179790 105 ntBASIC5.34□□□□□ -1.55
Usp40Q8BWR4 Gm28146-201ENSMUST00000185517 701 ntBASIC5.34□□□□□ -1.55
Usp40Q8BWR4 Gm28574-201ENSMUST00000185757 699 ntBASIC5.34□□□□□ -1.55
Usp40Q8BWR4 Gm28397-201ENSMUST00000187970 699 ntBASIC5.34□□□□□ -1.55
Usp40Q8BWR4 Npn2-202ENSMUST00000189275 235 ntBASIC5.34□□□□□ -1.55
Usp40Q8BWR4 Gm29366-201ENSMUST00000190481 699 ntBASIC5.34□□□□□ -1.55
Usp40Q8BWR4 Gm36985-201ENSMUST00000195595 379 ntBASIC5.34□□□□□ -1.55
Usp40Q8BWR4 Gm39197-201ENSMUST00000212069 457 ntBASIC5.34□□□□□ -1.55
Usp40Q8BWR4 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Usp40Q8BWR4 Gm20102-201ENSMUST00000222445 220 ntBASIC5.34□□□□□ -1.55
Usp40Q8BWR4 AC165092.3-201ENSMUST00000223602 282 ntBASIC5.34□□□□□ -1.55
Usp40Q8BWR4 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Usp40Q8BWR4 Snord42a-201ENSMUST00000082606 65 ntBASIC5.34□□□□□ -1.55
Usp40Q8BWR4 Gm23302-201ENSMUST00000082710 100 ntBASIC5.34□□□□□ -1.55
Usp40Q8BWR4 n-R5s166-201ENSMUST00000082898 121 ntBASIC5.34□□□□□ -1.55
Usp40Q8BWR4 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Usp40Q8BWR4 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Usp40Q8BWR4 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Usp40Q8BWR4 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
Usp40Q8BWR4 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Usp40Q8BWR4 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Usp40Q8BWR4 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Usp40Q8BWR4 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
Usp40Q8BWR4 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC5.34□□□□□ -1.56
Usp40Q8BWR4 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Usp40Q8BWR4 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Usp40Q8BWR4 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Usp40Q8BWR4 Gm43831-201ENSMUST00000200461 2598 ntBASIC5.33□□□□□ -1.56
Usp40Q8BWR4 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Usp40Q8BWR4 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Usp40Q8BWR4 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Usp40Q8BWR4 Gm12765-201ENSMUST00000117273 615 ntBASIC5.33□□□□□ -1.56
Usp40Q8BWR4 Gm12805-201ENSMUST00000117305 1048 ntBASIC5.33□□□□□ -1.56
Usp40Q8BWR4 Gm12149-201ENSMUST00000117511 654 ntBASIC5.33□□□□□ -1.56
Usp40Q8BWR4 Gm15215-201ENSMUST00000117773 489 ntBASIC5.33□□□□□ -1.56
Usp40Q8BWR4 Gm11577-201ENSMUST00000118030 737 ntBASIC5.33□□□□□ -1.56
Usp40Q8BWR4 Gm12458-201ENSMUST00000119387 495 ntBASIC5.33□□□□□ -1.56
Usp40Q8BWR4 Gm14647-201ENSMUST00000119392 680 ntBASIC5.33□□□□□ -1.56
Usp40Q8BWR4 Gm6071-201ENSMUST00000119561 440 ntBASIC5.33□□□□□ -1.56
Usp40Q8BWR4 Gm14655-201ENSMUST00000120124 578 ntBASIC5.33□□□□□ -1.56
Usp40Q8BWR4 Gm26476-201ENSMUST00000122618 313 ntBASIC5.33□□□□□ -1.56
Usp40Q8BWR4 Gm24909-201ENSMUST00000157290 280 ntBASIC5.33□□□□□ -1.56
Usp40Q8BWR4 Gm25339-201ENSMUST00000157458 232 ntBASIC5.33□□□□□ -1.56
Usp40Q8BWR4 Gm23144-201ENSMUST00000180226 107 ntBASIC5.33□□□□□ -1.56
Usp40Q8BWR4 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC5.33□□□□□ -1.56
Usp40Q8BWR4 Gm44611-201ENSMUST00000207507 355 ntBASIC5.33□□□□□ -1.56
Usp40Q8BWR4 AC153506.2-201ENSMUST00000218051 257 ntBASIC5.33□□□□□ -1.56
Usp40Q8BWR4 AC135377.1-201ENSMUST00000223692 463 ntBASIC5.33□□□□□ -1.56
Usp40Q8BWR4 AC115289.1-201ENSMUST00000224915 522 ntBASIC5.33□□□□□ -1.56
Usp40Q8BWR4 CT025689.4-201ENSMUST00000225926 601 ntBASIC5.33□□□□□ -1.56
Usp40Q8BWR4 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Usp40Q8BWR4 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Usp40Q8BWR4 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Usp40Q8BWR4 Gm25579-201ENSMUST00000083407 106 ntBASIC5.33□□□□□ -1.56
Usp40Q8BWR4 Gm38073-201ENSMUST00000195141 3665 ntBASIC5.33□□□□□ -1.56
Usp40Q8BWR4 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Usp40Q8BWR4 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Usp40Q8BWR4 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
Usp40Q8BWR4 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Usp40Q8BWR4 Gm43751-201ENSMUST00000200275 3071 ntBASIC5.32□□□□□ -1.56
Usp40Q8BWR4 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Usp40Q8BWR4 Gm43886-201ENSMUST00000205039 2386 ntBASIC5.32□□□□□ -1.56
Usp40Q8BWR4 Gm23691-201ENSMUST00000101878 107 ntBASIC5.32□□□□□ -1.56
Usp40Q8BWR4 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Usp40Q8BWR4 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Usp40Q8BWR4 Gm11936-201ENSMUST00000118323 160 ntBASIC5.32□□□□□ -1.56
Usp40Q8BWR4 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC5.32□□□□□ -1.56
Usp40Q8BWR4 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Usp40Q8BWR4 Gm12543-201ENSMUST00000120410 543 ntBASIC5.32□□□□□ -1.56
Usp40Q8BWR4 Gm11388-201ENSMUST00000120908 159 ntBASIC5.32□□□□□ -1.56
Usp40Q8BWR4 Gm14578-201ENSMUST00000122166 391 ntBASIC5.32□□□□□ -1.56
Usp40Q8BWR4 Gm25572-201ENSMUST00000157527 172 ntBASIC5.32□□□□□ -1.56
Usp40Q8BWR4 Gm25454-201ENSMUST00000157947 315 ntBASIC5.32□□□□□ -1.56
Usp40Q8BWR4 Gm26352-201ENSMUST00000158223 125 ntBASIC5.32□□□□□ -1.56
Usp40Q8BWR4 Gm23581-201ENSMUST00000158531 63 ntBASIC5.32□□□□□ -1.56
Usp40Q8BWR4 Gm24553-201ENSMUST00000158653 131 ntBASIC5.32□□□□□ -1.56
Usp40Q8BWR4 Gm19637-201ENSMUST00000185933 579 ntBASIC5.32□□□□□ -1.56
Usp40Q8BWR4 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC5.32□□□□□ -1.56
Usp40Q8BWR4 Gm44371-201ENSMUST00000204148 467 ntBASIC5.32□□□□□ -1.56
Usp40Q8BWR4 Gm18487-201ENSMUST00000215826 878 ntBASIC5.32□□□□□ -1.56
Usp40Q8BWR4 AC160865.1-201ENSMUST00000219873 151 ntBASIC5.32□□□□□ -1.56
Usp40Q8BWR4 AL645546.1-201ENSMUST00000225001 189 ntBASIC5.32□□□□□ -1.56
Usp40Q8BWR4 AC115291.2-201ENSMUST00000228335 437 ntBASIC5.32□□□□□ -1.56
Usp40Q8BWR4 Snord38a-201ENSMUST00000083746 71 ntBASIC5.32□□□□□ -1.56
Usp40Q8BWR4 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Usp40Q8BWR4 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Usp40Q8BWR4 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Usp40Q8BWR4 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Usp40Q8BWR4 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
Usp40Q8BWR4 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Usp40Q8BWR4 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Usp40Q8BWR4 Gm15994-201ENSMUST00000118029 402 ntBASIC5.31□□□□□ -1.56
Usp40Q8BWR4 Gm14292-201ENSMUST00000118761 456 ntBASIC5.31□□□□□ -1.56
Usp40Q8BWR4 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC5.31□□□□□ -1.56
Usp40Q8BWR4 Gm22320-201ENSMUST00000157149 312 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms