Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
Nup54Q8BTS4 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
Nup54Q8BTS4 AC158805.1-201ENSMUST00000218197 2631 ntBASIC3.22□□□□□ -1.89
Nup54Q8BTS4 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Nup54Q8BTS4 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Nup54Q8BTS4 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Nup54Q8BTS4 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Nup54Q8BTS4 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC3.21□□□□□ -1.9
Nup54Q8BTS4 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.21□□□□□ -1.9
Nup54Q8BTS4 Gm25102-201ENSMUST00000122479 112 ntBASIC3.21□□□□□ -1.9
Nup54Q8BTS4 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Nup54Q8BTS4 Mir7578-201ENSMUST00000183455 82 ntBASIC3.21□□□□□ -1.9
Nup54Q8BTS4 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.21□□□□□ -1.9
Nup54Q8BTS4 Gm28146-201ENSMUST00000185517 701 ntBASIC3.21□□□□□ -1.9
Nup54Q8BTS4 Gm29602-201ENSMUST00000186887 442 ntBASIC3.21□□□□□ -1.9
Nup54Q8BTS4 Gm7142-201ENSMUST00000194232 586 ntBASIC3.21□□□□□ -1.9
Nup54Q8BTS4 Gm37817-201ENSMUST00000195276 434 ntBASIC3.21□□□□□ -1.9
Nup54Q8BTS4 Gm44387-201ENSMUST00000196298 145 ntBASIC3.21□□□□□ -1.9
Nup54Q8BTS4 Gm25203-202ENSMUST00000200458 216 ntBASIC3.21□□□□□ -1.9
Nup54Q8BTS4 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Nup54Q8BTS4 AC121966.1-201ENSMUST00000221458 282 ntBASIC3.21□□□□□ -1.9
Nup54Q8BTS4 AC154224.1-201ENSMUST00000224367 403 ntBASIC3.21□□□□□ -1.9
Nup54Q8BTS4 AC137902.2-201ENSMUST00000227989 576 ntBASIC3.21□□□□□ -1.9
Nup54Q8BTS4 AC125464.1-201ENSMUST00000228013 512 ntBASIC3.21□□□□□ -1.9
Nup54Q8BTS4 Gm25203-201ENSMUST00000082842 215 ntBASIC3.21□□□□□ -1.9
Nup54Q8BTS4 Gm25582-201ENSMUST00000083412 110 ntBASIC3.21□□□□□ -1.9
Nup54Q8BTS4 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Nup54Q8BTS4 Gm3584-201ENSMUST00000173822 2565 ntBASIC3.21□□□□□ -1.9
Nup54Q8BTS4 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.21□□□□□ -1.9
Nup54Q8BTS4 Gm17976-201ENSMUST00000184037 1909 ntBASIC3.21□□□□□ -1.9
Nup54Q8BTS4 Gm38090-201ENSMUST00000195733 1942 ntBASIC3.21□□□□□ -1.9
Nup54Q8BTS4 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Nup54Q8BTS4 Mir466n-201ENSMUST00000104798 94 ntBASIC3.2□□□□□ -1.9
Nup54Q8BTS4 Gm11268-201ENSMUST00000118347 267 ntBASIC3.2□□□□□ -1.9
Nup54Q8BTS4 Gm9440-201ENSMUST00000119667 539 ntBASIC3.2□□□□□ -1.9
Nup54Q8BTS4 Gm12607-201ENSMUST00000120724 493 ntBASIC3.2□□□□□ -1.9
Nup54Q8BTS4 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC3.2□□□□□ -1.9
Nup54Q8BTS4 Gm14389-201ENSMUST00000140453 241 ntBASIC3.2□□□□□ -1.9
Nup54Q8BTS4 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.2□□□□□ -1.9
Nup54Q8BTS4 Gm24198-201ENSMUST00000157812 108 ntBASIC3.2□□□□□ -1.9
Nup54Q8BTS4 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC3.2□□□□□ -1.9
Nup54Q8BTS4 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.2□□□□□ -1.9
Nup54Q8BTS4 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC3.2□□□□□ -1.9
Nup54Q8BTS4 Gm26991-201ENSMUST00000180950 620 ntBASIC3.2□□□□□ -1.9
Nup54Q8BTS4 Gm7870-201ENSMUST00000184467 616 ntBASIC3.2□□□□□ -1.9
Nup54Q8BTS4 Gm44727-201ENSMUST00000204225 451 ntBASIC3.2□□□□□ -1.9
Nup54Q8BTS4 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC3.2□□□□□ -1.9
Nup54Q8BTS4 Gm19126-201ENSMUST00000207896 509 ntBASIC3.2□□□□□ -1.9
Nup54Q8BTS4 Gm18252-203ENSMUST00000215855 757 ntBASIC3.2□□□□□ -1.9
Nup54Q8BTS4 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC3.2□□□□□ -1.9
Nup54Q8BTS4 AC123618.1-201ENSMUST00000220174 360 ntBASIC3.2□□□□□ -1.9
Nup54Q8BTS4 LOC667541-201ENSMUST00000223408 278 ntBASIC3.2□□□□□ -1.9
Nup54Q8BTS4 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Nup54Q8BTS4 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Nup54Q8BTS4 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Nup54Q8BTS4 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Nup54Q8BTS4 Gm23297-201ENSMUST00000083184 127 ntBASIC3.2□□□□□ -1.9
Nup54Q8BTS4 Gm42614-201ENSMUST00000198724 1554 ntBASIC3.2□□□□□ -1.9
Nup54Q8BTS4 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
Nup54Q8BTS4 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.2□□□□□ -1.9
Nup54Q8BTS4 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.19□□□□□ -1.9
Nup54Q8BTS4 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Nup54Q8BTS4 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Nup54Q8BTS4 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.19□□□□□ -1.9
Nup54Q8BTS4 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Nup54Q8BTS4 Gm22497-201ENSMUST00000104499 131 ntBASIC3.19□□□□□ -1.9
Nup54Q8BTS4 Gm14794-201ENSMUST00000118181 192 ntBASIC3.19□□□□□ -1.9
Nup54Q8BTS4 Gm14651-201ENSMUST00000147192 442 ntBASIC3.19□□□□□ -1.9
Nup54Q8BTS4 Gm22187-201ENSMUST00000157819 129 ntBASIC3.19□□□□□ -1.9
Nup54Q8BTS4 Gm17085-201ENSMUST00000165425 502 ntBASIC3.19□□□□□ -1.9
Nup54Q8BTS4 Gm2930-201ENSMUST00000170403 474 ntBASIC3.19□□□□□ -1.9
Nup54Q8BTS4 Gm26297-201ENSMUST00000179464 132 ntBASIC3.19□□□□□ -1.9
Nup54Q8BTS4 Gm21894-201ENSMUST00000179631 546 ntBASIC3.19□□□□□ -1.9
Nup54Q8BTS4 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC3.19□□□□□ -1.9
Nup54Q8BTS4 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Nup54Q8BTS4 Gm37213-201ENSMUST00000193077 586 ntBASIC3.19□□□□□ -1.9
Nup54Q8BTS4 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Nup54Q8BTS4 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC3.19□□□□□ -1.9
Nup54Q8BTS4 Ighv1-40-201ENSMUST00000194231 345 ntBASIC3.19□□□□□ -1.9
Nup54Q8BTS4 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Nup54Q8BTS4 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Nup54Q8BTS4 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC3.19□□□□□ -1.9
Nup54Q8BTS4 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Nup54Q8BTS4 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC3.19□□□□□ -1.9
Nup54Q8BTS4 Gm43746-201ENSMUST00000200028 317 ntBASIC3.19□□□□□ -1.9
Nup54Q8BTS4 Gm44274-201ENSMUST00000203417 256 ntBASIC3.19□□□□□ -1.9
Nup54Q8BTS4 Gm45439-201ENSMUST00000211723 359 ntBASIC3.19□□□□□ -1.9
Nup54Q8BTS4 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC3.19□□□□□ -1.9
Nup54Q8BTS4 AC145736.1-201ENSMUST00000214661 479 ntBASIC3.19□□□□□ -1.9
Nup54Q8BTS4 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC3.19□□□□□ -1.9
Nup54Q8BTS4 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC3.19□□□□□ -1.9
Nup54Q8BTS4 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC3.19□□□□□ -1.9
Nup54Q8BTS4 AC167977.1-201ENSMUST00000221384 234 ntBASIC3.19□□□□□ -1.9
Nup54Q8BTS4 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC3.19□□□□□ -1.9
Nup54Q8BTS4 AC107453.2-201ENSMUST00000227714 655 ntBASIC3.19□□□□□ -1.9
Nup54Q8BTS4 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Nup54Q8BTS4 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC3.19□□□□□ -1.9
Nup54Q8BTS4 n-R5s79-201ENSMUST00000083071 120 ntBASIC3.19□□□□□ -1.9
Nup54Q8BTS4 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Nup54Q8BTS4 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 141.4 ms