Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Ccdc40Q8BI79 Gm11490-201ENSMUST00000118128 272 ntBASIC3.28□□□□□ -1.88
Ccdc40Q8BI79 Gm11268-201ENSMUST00000118347 267 ntBASIC3.28□□□□□ -1.88
Ccdc40Q8BI79 Gm14669-201ENSMUST00000118841 250 ntBASIC3.28□□□□□ -1.88
Ccdc40Q8BI79 Gm13239-201ENSMUST00000119920 637 ntBASIC3.28□□□□□ -1.88
Ccdc40Q8BI79 Gm12640-201ENSMUST00000120097 310 ntBASIC3.28□□□□□ -1.88
Ccdc40Q8BI79 Mup-ps13-201ENSMUST00000120662 545 ntBASIC3.28□□□□□ -1.88
Ccdc40Q8BI79 Mup-ps1-201ENSMUST00000120720 544 ntBASIC3.28□□□□□ -1.88
Ccdc40Q8BI79 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC3.28□□□□□ -1.88
Ccdc40Q8BI79 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC3.28□□□□□ -1.88
Ccdc40Q8BI79 Gm23326-201ENSMUST00000157419 105 ntBASIC3.28□□□□□ -1.88
Ccdc40Q8BI79 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC3.28□□□□□ -1.88
Ccdc40Q8BI79 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC3.28□□□□□ -1.88
Ccdc40Q8BI79 Gm13147-202ENSMUST00000177526 1173 ntBASIC3.28□□□□□ -1.88
Ccdc40Q8BI79 Mir6372-201ENSMUST00000185114 109 ntBASIC3.28□□□□□ -1.88
Ccdc40Q8BI79 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Ccdc40Q8BI79 Gm38149-201ENSMUST00000191943 339 ntBASIC3.28□□□□□ -1.88
Ccdc40Q8BI79 Gm38075-201ENSMUST00000191979 920 ntBASIC3.28□□□□□ -1.88
Ccdc40Q8BI79 Gm37213-201ENSMUST00000193077 586 ntBASIC3.28□□□□□ -1.88
Ccdc40Q8BI79 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC3.28□□□□□ -1.88
Ccdc40Q8BI79 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC3.28□□□□□ -1.88
Ccdc40Q8BI79 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.28□□□□□ -1.88
Ccdc40Q8BI79 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC3.28□□□□□ -1.88
Ccdc40Q8BI79 Gm44208-201ENSMUST00000205199 421 ntBASIC3.28□□□□□ -1.88
Ccdc40Q8BI79 AC157570.3-201ENSMUST00000219281 205 ntBASIC3.28□□□□□ -1.88
Ccdc40Q8BI79 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC3.28□□□□□ -1.88
Ccdc40Q8BI79 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Ccdc40Q8BI79 Gm24147-201ENSMUST00000082763 144 ntBASIC3.28□□□□□ -1.88
Ccdc40Q8BI79 Mir21a-201ENSMUST00000083521 92 ntBASIC3.28□□□□□ -1.88
Ccdc40Q8BI79 Mir103-2-201ENSMUST00000083629 86 ntBASIC3.28□□□□□ -1.88
Ccdc40Q8BI79 Gm15302-201ENSMUST00000117779 2630 ntBASIC3.28□□□□□ -1.88
Ccdc40Q8BI79 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Ccdc40Q8BI79 Gm43092-201ENSMUST00000202986 1854 ntBASIC3.28□□□□□ -1.88
Ccdc40Q8BI79 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.89
Ccdc40Q8BI79 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.89
Ccdc40Q8BI79 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
Ccdc40Q8BI79 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Ccdc40Q8BI79 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Ccdc40Q8BI79 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
Ccdc40Q8BI79 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Ccdc40Q8BI79 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Ccdc40Q8BI79 Gm14238-201ENSMUST00000120227 323 ntBASIC3.27□□□□□ -1.89
Ccdc40Q8BI79 Gm11582-201ENSMUST00000121041 236 ntBASIC3.27□□□□□ -1.89
Ccdc40Q8BI79 Gm11456-201ENSMUST00000121070 256 ntBASIC3.27□□□□□ -1.89
Ccdc40Q8BI79 Gm6762-201ENSMUST00000121769 289 ntBASIC3.27□□□□□ -1.89
Ccdc40Q8BI79 Gm25295-201ENSMUST00000122794 306 ntBASIC3.27□□□□□ -1.89
Ccdc40Q8BI79 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC3.27□□□□□ -1.89
Ccdc40Q8BI79 Gm22722-201ENSMUST00000157467 132 ntBASIC3.27□□□□□ -1.89
Ccdc40Q8BI79 Gm22833-201ENSMUST00000158292 132 ntBASIC3.27□□□□□ -1.89
Ccdc40Q8BI79 Gm17061-201ENSMUST00000163167 499 ntBASIC3.27□□□□□ -1.89
Ccdc40Q8BI79 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Ccdc40Q8BI79 Gm29288-201ENSMUST00000191582 901 ntBASIC3.27□□□□□ -1.89
Ccdc40Q8BI79 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Ccdc40Q8BI79 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC3.27□□□□□ -1.89
Ccdc40Q8BI79 Gm18557-201ENSMUST00000218710 433 ntBASIC3.27□□□□□ -1.89
Ccdc40Q8BI79 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC3.27□□□□□ -1.89
Ccdc40Q8BI79 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC3.27□□□□□ -1.89
Ccdc40Q8BI79 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.27□□□□□ -1.89
Ccdc40Q8BI79 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC3.27□□□□□ -1.89
Ccdc40Q8BI79 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Ccdc40Q8BI79 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Ccdc40Q8BI79 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Ccdc40Q8BI79 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Ccdc40Q8BI79 Gm24119-201ENSMUST00000103979 246 ntBASIC3.26□□□□□ -1.89
Ccdc40Q8BI79 Gm14931-201ENSMUST00000111079 253 ntBASIC3.26□□□□□ -1.89
Ccdc40Q8BI79 Gm12458-201ENSMUST00000119387 495 ntBASIC3.26□□□□□ -1.89
Ccdc40Q8BI79 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC3.26□□□□□ -1.89
Ccdc40Q8BI79 Gm26099-201ENSMUST00000157248 109 ntBASIC3.26□□□□□ -1.89
Ccdc40Q8BI79 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Ccdc40Q8BI79 Gm22858-201ENSMUST00000174972 76 ntBASIC3.26□□□□□ -1.89
Ccdc40Q8BI79 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Ccdc40Q8BI79 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC3.26□□□□□ -1.89
Ccdc40Q8BI79 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Ccdc40Q8BI79 Gm27861-201ENSMUST00000183920 214 ntBASIC3.26□□□□□ -1.89
Ccdc40Q8BI79 Gm29658-201ENSMUST00000185404 230 ntBASIC3.26□□□□□ -1.89
Ccdc40Q8BI79 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC3.26□□□□□ -1.89
Ccdc40Q8BI79 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.26□□□□□ -1.89
Ccdc40Q8BI79 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC3.26□□□□□ -1.89
Ccdc40Q8BI79 AC168059.2-201ENSMUST00000224473 333 ntBASIC3.26□□□□□ -1.89
Ccdc40Q8BI79 AC124524.1-201ENSMUST00000225833 181 ntBASIC3.26□□□□□ -1.89
Ccdc40Q8BI79 AC121114.1-201ENSMUST00000228522 570 ntBASIC3.26□□□□□ -1.89
Ccdc40Q8BI79 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Ccdc40Q8BI79 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Ccdc40Q8BI79 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Ccdc40Q8BI79 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC3.26□□□□□ -1.89
Ccdc40Q8BI79 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.26□□□□□ -1.89
Ccdc40Q8BI79 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Ccdc40Q8BI79 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Ccdc40Q8BI79 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
Ccdc40Q8BI79 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Ccdc40Q8BI79 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
Ccdc40Q8BI79 Gm37928-201ENSMUST00000193265 4131 ntBASIC3.25□□□□□ -1.89
Ccdc40Q8BI79 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Ccdc40Q8BI79 Gm22658-201ENSMUST00000104196 155 ntBASIC3.25□□□□□ -1.89
Ccdc40Q8BI79 Gm14020-201ENSMUST00000118165 662 ntBASIC3.25□□□□□ -1.89
Ccdc40Q8BI79 Gm12507-201ENSMUST00000119155 415 ntBASIC3.25□□□□□ -1.89
Ccdc40Q8BI79 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3.25□□□□□ -1.89
Ccdc40Q8BI79 Gm12368-201ENSMUST00000122251 434 ntBASIC3.25□□□□□ -1.89
Ccdc40Q8BI79 Gm13424-201ENSMUST00000122301 354 ntBASIC3.25□□□□□ -1.89
Ccdc40Q8BI79 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC3.25□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 146.8 ms