Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.6□□□□□ -1.99
Scn10aQ6QIY3 Gm45130-201ENSMUST00000207574 3388 ntBASIC2.6□□□□□ -1.99
Scn10aQ6QIY3 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Scn10aQ6QIY3 Gm14163-201ENSMUST00000117342 217 ntBASIC2.6□□□□□ -1.99
Scn10aQ6QIY3 Gm12401-201ENSMUST00000118435 228 ntBASIC2.6□□□□□ -1.99
Scn10aQ6QIY3 Gm12607-201ENSMUST00000120724 493 ntBASIC2.6□□□□□ -1.99
Scn10aQ6QIY3 Gm15244-201ENSMUST00000121122 130 ntBASIC2.6□□□□□ -1.99
Scn10aQ6QIY3 Gm11965-201ENSMUST00000122017 277 ntBASIC2.6□□□□□ -1.99
Scn10aQ6QIY3 Gm16331-201ENSMUST00000144274 498 ntBASIC2.6□□□□□ -1.99
Scn10aQ6QIY3 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC2.6□□□□□ -1.99
Scn10aQ6QIY3 Gm23043-201ENSMUST00000157890 109 ntBASIC2.6□□□□□ -1.99
Scn10aQ6QIY3 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
Scn10aQ6QIY3 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Scn10aQ6QIY3 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
Scn10aQ6QIY3 Mir8103-201ENSMUST00000183945 107 ntBASIC2.6□□□□□ -1.99
Scn10aQ6QIY3 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC2.6□□□□□ -1.99
Scn10aQ6QIY3 Gm18043-201ENSMUST00000216741 739 ntBASIC2.6□□□□□ -1.99
Scn10aQ6QIY3 AC183092.2-201ENSMUST00000225542 1153 ntBASIC2.6□□□□□ -1.99
Scn10aQ6QIY3 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Scn10aQ6QIY3 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Scn10aQ6QIY3 AC126673.3-201ENSMUST00000223414 3829 ntBASIC2.6□□□□□ -1.99
Scn10aQ6QIY3 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.6□□□□□ -1.99
Scn10aQ6QIY3 Snord14c-201ENSMUST00000101927 86 ntBASIC2.6□□□□□ -1.99
Scn10aQ6QIY3 Gm11890-201ENSMUST00000119585 417 ntBASIC2.6□□□□□ -1.99
Scn10aQ6QIY3 Gm14804-201ENSMUST00000122322 508 ntBASIC2.6□□□□□ -1.99
Scn10aQ6QIY3 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC2.6□□□□□ -1.99
Scn10aQ6QIY3 Gm23600-201ENSMUST00000157260 71 ntBASIC2.6□□□□□ -1.99
Scn10aQ6QIY3 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Scn10aQ6QIY3 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC2.6□□□□□ -1.99
Scn10aQ6QIY3 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC2.6□□□□□ -1.99
Scn10aQ6QIY3 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Scn10aQ6QIY3 Gm3010-201ENSMUST00000198805 448 ntBASIC2.6□□□□□ -1.99
Scn10aQ6QIY3 Gm18611-201ENSMUST00000200334 1118 ntBASIC2.6□□□□□ -1.99
Scn10aQ6QIY3 AC153662.1-201ENSMUST00000222220 270 ntBASIC2.6□□□□□ -1.99
Scn10aQ6QIY3 AC173481.1-201ENSMUST00000223351 270 ntBASIC2.6□□□□□ -1.99
Scn10aQ6QIY3 AC137902.2-201ENSMUST00000227989 576 ntBASIC2.6□□□□□ -1.99
Scn10aQ6QIY3 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Scn10aQ6QIY3 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.59□□□□□ -1.99
Scn10aQ6QIY3 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Scn10aQ6QIY3 Gm43663-201ENSMUST00000198643 1505 ntBASIC2.59□□□□□ -1.99
Scn10aQ6QIY3 Gm12230-201ENSMUST00000118301 454 ntBASIC2.59□□□□□ -2
Scn10aQ6QIY3 Gm25807-201ENSMUST00000122783 305 ntBASIC2.59□□□□□ -2
Scn10aQ6QIY3 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
Scn10aQ6QIY3 Gm9613-201ENSMUST00000171662 196 ntBASIC2.59□□□□□ -2
Scn10aQ6QIY3 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC2.59□□□□□ -2
Scn10aQ6QIY3 Gm37629-201ENSMUST00000193635 1050 ntBASIC2.59□□□□□ -2
Scn10aQ6QIY3 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC2.59□□□□□ -2
Scn10aQ6QIY3 Gm18015-201ENSMUST00000214879 316 ntBASIC2.59□□□□□ -2
Scn10aQ6QIY3 Gm7530-201ENSMUST00000218466 605 ntBASIC2.59□□□□□ -2
Scn10aQ6QIY3 AC124433.2-201ENSMUST00000223867 291 ntBASIC2.59□□□□□ -2
Scn10aQ6QIY3 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC2.59□□□□□ -2
Scn10aQ6QIY3 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC2.59□□□□□ -2
Scn10aQ6QIY3 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
Scn10aQ6QIY3 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Scn10aQ6QIY3 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC2.59□□□□□ -2
Scn10aQ6QIY3 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Scn10aQ6QIY3 Gm14927-201ENSMUST00000120283 454 ntBASIC2.58□□□□□ -2
Scn10aQ6QIY3 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC2.58□□□□□ -2
Scn10aQ6QIY3 Gm24436-201ENSMUST00000157889 302 ntBASIC2.58□□□□□ -2
Scn10aQ6QIY3 Gm20526-201ENSMUST00000173416 158 ntBASIC2.58□□□□□ -2
Scn10aQ6QIY3 Nrg3os-201ENSMUST00000177141 927 ntTSL 1 (best) BASIC2.58□□□□□ -2
Scn10aQ6QIY3 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC2.58□□□□□ -2
Scn10aQ6QIY3 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC2.58□□□□□ -2
Scn10aQ6QIY3 Gm45078-201ENSMUST00000205343 546 ntBASIC2.58□□□□□ -2
Scn10aQ6QIY3 Gm45654-201ENSMUST00000210980 123 ntBASIC2.58□□□□□ -2
Scn10aQ6QIY3 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.58□□□□□ -2
Scn10aQ6QIY3 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.58□□□□□ -2
Scn10aQ6QIY3 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC2.58□□□□□ -2
Scn10aQ6QIY3 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC2.58□□□□□ -2
Scn10aQ6QIY3 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
Scn10aQ6QIY3 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Scn10aQ6QIY3 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.58□□□□□ -2
Scn10aQ6QIY3 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
Scn10aQ6QIY3 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Scn10aQ6QIY3 Gm13588-201ENSMUST00000120026 135 ntBASIC2.58□□□□□ -2
Scn10aQ6QIY3 Gm24379-201ENSMUST00000122695 86 ntBASIC2.58□□□□□ -2
Scn10aQ6QIY3 Gm22793-201ENSMUST00000157227 330 ntBASIC2.58□□□□□ -2
Scn10aQ6QIY3 Gm44501-201ENSMUST00000167713 1229 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
Scn10aQ6QIY3 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC2.58□□□□□ -2
Scn10aQ6QIY3 Samd15-201ENSMUST00000169669 1194 ntBASIC2.58□□□□□ -2
Scn10aQ6QIY3 Gm28975-201ENSMUST00000186412 686 ntBASIC2.58□□□□□ -2
Scn10aQ6QIY3 Gm28923-201ENSMUST00000187755 322 ntBASIC2.58□□□□□ -2
Scn10aQ6QIY3 Gm28466-201ENSMUST00000190678 659 ntBASIC2.58□□□□□ -2
Scn10aQ6QIY3 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC2.58□□□□□ -2
Scn10aQ6QIY3 Gm37431-201ENSMUST00000195102 111 ntBASIC2.58□□□□□ -2
Scn10aQ6QIY3 Gm45772-201ENSMUST00000212961 240 ntBASIC2.58□□□□□ -2
Scn10aQ6QIY3 Zmym2-202ENSMUST00000223669 1281 ntBASIC2.58□□□□□ -2
Scn10aQ6QIY3 Gm25636-201ENSMUST00000082666 133 ntBASIC2.58□□□□□ -2
Scn10aQ6QIY3 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Scn10aQ6QIY3 Gm28627-201ENSMUST00000186141 453 ntBASIC2.57□□□□□ -2
Scn10aQ6QIY3 Gm28155-201ENSMUST00000191066 151 ntBASIC2.57□□□□□ -2
Scn10aQ6QIY3 Gm45072-201ENSMUST00000208673 929 ntBASIC2.57□□□□□ -2
Scn10aQ6QIY3 AC140254.1-201ENSMUST00000220063 331 ntBASIC2.57□□□□□ -2
Scn10aQ6QIY3 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC2.57□□□□□ -2
Scn10aQ6QIY3 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC2.57□□□□□ -2
Scn10aQ6QIY3 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC2.57□□□□□ -2
Scn10aQ6QIY3 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Scn10aQ6QIY3 Gm14823-201ENSMUST00000117698 238 ntBASIC2.56□□□□□ -2
Scn10aQ6QIY3 Gm5396-201ENSMUST00000121222 532 ntBASIC2.56□□□□□ -2
Scn10aQ6QIY3 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC2.56□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms