Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC4.1□□□□□ -1.75
Rnf220Q6PDX6 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC4.1□□□□□ -1.75
Rnf220Q6PDX6 Gm12819-201ENSMUST00000122223 629 ntBASIC4.1□□□□□ -1.75
Rnf220Q6PDX6 Gm5401-201ENSMUST00000122444 365 ntBASIC4.1□□□□□ -1.75
Rnf220Q6PDX6 Gm26255-201ENSMUST00000122492 103 ntBASIC4.1□□□□□ -1.75
Rnf220Q6PDX6 Gm25103-201ENSMUST00000122671 318 ntBASIC4.1□□□□□ -1.75
Rnf220Q6PDX6 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC4.1□□□□□ -1.75
Rnf220Q6PDX6 Gm24774-201ENSMUST00000157384 134 ntBASIC4.1□□□□□ -1.75
Rnf220Q6PDX6 Gm23585-201ENSMUST00000157656 102 ntBASIC4.1□□□□□ -1.75
Rnf220Q6PDX6 Gm24930-201ENSMUST00000158315 83 ntBASIC4.1□□□□□ -1.75
Rnf220Q6PDX6 Gm16290-201ENSMUST00000161175 474 ntBASIC4.1□□□□□ -1.75
Rnf220Q6PDX6 Gm8207-201ENSMUST00000171204 502 ntBASIC4.1□□□□□ -1.75
Rnf220Q6PDX6 Gm26318-201ENSMUST00000176507 96 ntBASIC4.1□□□□□ -1.75
Rnf220Q6PDX6 Gm4617-201ENSMUST00000178993 331 ntBASIC4.1□□□□□ -1.75
Rnf220Q6PDX6 Gm26828-201ENSMUST00000180640 172 ntBASIC4.1□□□□□ -1.75
Rnf220Q6PDX6 Mir6338-201ENSMUST00000183389 109 ntBASIC4.1□□□□□ -1.75
Rnf220Q6PDX6 Mir7653-201ENSMUST00000184358 61 ntBASIC4.1□□□□□ -1.75
Rnf220Q6PDX6 Mir8106-201ENSMUST00000184520 139 ntBASIC4.1□□□□□ -1.75
Rnf220Q6PDX6 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC4.1□□□□□ -1.75
Rnf220Q6PDX6 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC4.1□□□□□ -1.75
Rnf220Q6PDX6 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Rnf220Q6PDX6 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC4.1□□□□□ -1.75
Rnf220Q6PDX6 Gm37601-201ENSMUST00000194922 394 ntBASIC4.1□□□□□ -1.75
Rnf220Q6PDX6 Igkv13-64-201ENSMUST00000198143 343 ntBASIC4.1□□□□□ -1.75
Rnf220Q6PDX6 AC115750.1-201ENSMUST00000220441 567 ntBASIC4.1□□□□□ -1.75
Rnf220Q6PDX6 AC154788.1-201ENSMUST00000225003 340 ntBASIC4.1□□□□□ -1.75
Rnf220Q6PDX6 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC4.1□□□□□ -1.75
Rnf220Q6PDX6 Gm23510-201ENSMUST00000083083 163 ntBASIC4.1□□□□□ -1.75
Rnf220Q6PDX6 Gm25512-201ENSMUST00000083863 107 ntBASIC4.1□□□□□ -1.75
Rnf220Q6PDX6 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Rnf220Q6PDX6 Gm10343-201ENSMUST00000096279 348 ntBASIC4.1□□□□□ -1.75
Rnf220Q6PDX6 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Rnf220Q6PDX6 Gm44925-201ENSMUST00000208879 2110 ntBASIC4.1□□□□□ -1.75
Rnf220Q6PDX6 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
Rnf220Q6PDX6 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
Rnf220Q6PDX6 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC4.1□□□□□ -1.75
Rnf220Q6PDX6 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Rnf220Q6PDX6 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Rnf220Q6PDX6 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Rnf220Q6PDX6 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Rnf220Q6PDX6 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Rnf220Q6PDX6 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Rnf220Q6PDX6 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC4.09□□□□□ -1.75
Rnf220Q6PDX6 Gm23709-201ENSMUST00000104364 130 ntBASIC4.09□□□□□ -1.75
Rnf220Q6PDX6 Mir1188-201ENSMUST00000116756 120 ntBASIC4.09□□□□□ -1.75
Rnf220Q6PDX6 Gm8145-201ENSMUST00000118220 745 ntBASIC4.09□□□□□ -1.75
Rnf220Q6PDX6 Gm5379-201ENSMUST00000120973 826 ntBASIC4.09□□□□□ -1.75
Rnf220Q6PDX6 Gm13901-201ENSMUST00000137252 468 ntBASIC4.09□□□□□ -1.75
Rnf220Q6PDX6 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC4.09□□□□□ -1.75
Rnf220Q6PDX6 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Rnf220Q6PDX6 Gm26153-201ENSMUST00000157433 127 ntBASIC4.09□□□□□ -1.75
Rnf220Q6PDX6 Gm24059-201ENSMUST00000157493 312 ntBASIC4.09□□□□□ -1.75
Rnf220Q6PDX6 Gm26187-201ENSMUST00000157693 101 ntBASIC4.09□□□□□ -1.75
Rnf220Q6PDX6 Gm22530-201ENSMUST00000158820 118 ntBASIC4.09□□□□□ -1.75
Rnf220Q6PDX6 Gm23702-201ENSMUST00000158840 130 ntBASIC4.09□□□□□ -1.75
Rnf220Q6PDX6 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Rnf220Q6PDX6 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC4.09□□□□□ -1.75
Rnf220Q6PDX6 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Rnf220Q6PDX6 Mir7235-201ENSMUST00000183796 56 ntBASIC4.09□□□□□ -1.75
Rnf220Q6PDX6 Mir7037-201ENSMUST00000184414 65 ntBASIC4.09□□□□□ -1.75
Rnf220Q6PDX6 Mir6383-201ENSMUST00000184545 116 ntBASIC4.09□□□□□ -1.75
Rnf220Q6PDX6 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC4.09□□□□□ -1.75
Rnf220Q6PDX6 Gm29350-201ENSMUST00000189141 541 ntBASIC4.09□□□□□ -1.75
Rnf220Q6PDX6 Gm29454-201ENSMUST00000190805 393 ntBASIC4.09□□□□□ -1.75
Rnf220Q6PDX6 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC4.09□□□□□ -1.75
Rnf220Q6PDX6 Gm45312-201ENSMUST00000210566 311 ntBASIC4.09□□□□□ -1.75
Rnf220Q6PDX6 AC166902.1-201ENSMUST00000216653 517 ntBASIC4.09□□□□□ -1.75
Rnf220Q6PDX6 AC158803.3-201ENSMUST00000220024 211 ntBASIC4.09□□□□□ -1.75
Rnf220Q6PDX6 AC139376.1-201ENSMUST00000220056 1250 ntBASIC4.09□□□□□ -1.75
Rnf220Q6PDX6 AC132954.1-201ENSMUST00000221017 342 ntBASIC4.09□□□□□ -1.75
Rnf220Q6PDX6 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Rnf220Q6PDX6 AC163295.1-201ENSMUST00000227840 314 ntBASIC4.09□□□□□ -1.75
Rnf220Q6PDX6 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Rnf220Q6PDX6 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Rnf220Q6PDX6 Gm24623-201ENSMUST00000082616 194 ntBASIC4.09□□□□□ -1.75
Rnf220Q6PDX6 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
Rnf220Q6PDX6 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Rnf220Q6PDX6 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC4.09□□□□□ -1.75
Rnf220Q6PDX6 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
Rnf220Q6PDX6 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Rnf220Q6PDX6 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Rnf220Q6PDX6 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Rnf220Q6PDX6 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC4.09□□□□□ -1.76
Rnf220Q6PDX6 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Rnf220Q6PDX6 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Rnf220Q6PDX6 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Rnf220Q6PDX6 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Rnf220Q6PDX6 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Rnf220Q6PDX6 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Rnf220Q6PDX6 Gm23422-201ENSMUST00000102000 107 ntBASIC4.08□□□□□ -1.76
Rnf220Q6PDX6 Gm26067-201ENSMUST00000103789 110 ntBASIC4.08□□□□□ -1.76
Rnf220Q6PDX6 Gm22496-201ENSMUST00000104493 88 ntBASIC4.08□□□□□ -1.76
Rnf220Q6PDX6 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Rnf220Q6PDX6 Gm14622-201ENSMUST00000117117 468 ntBASIC4.08□□□□□ -1.76
Rnf220Q6PDX6 Gm12765-201ENSMUST00000117273 615 ntBASIC4.08□□□□□ -1.76
Rnf220Q6PDX6 Gm13873-201ENSMUST00000119208 427 ntBASIC4.08□□□□□ -1.76
Rnf220Q6PDX6 Gm14570-201ENSMUST00000119444 391 ntBASIC4.08□□□□□ -1.76
Rnf220Q6PDX6 Gm11718-201ENSMUST00000119942 537 ntBASIC4.08□□□□□ -1.76
Rnf220Q6PDX6 Gm25781-201ENSMUST00000122527 84 ntBASIC4.08□□□□□ -1.76
Rnf220Q6PDX6 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC4.08□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 114.6 ms