Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Gm23733-201ENSMUST00000083750 106 ntBASIC3.52□□□□□ -1.85
Hmgb4Q6P8W9 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Hmgb4Q6P8W9 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Hmgb4Q6P8W9 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.52□□□□□ -1.85
Hmgb4Q6P8W9 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Hmgb4Q6P8W9 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Hmgb4Q6P8W9 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
Hmgb4Q6P8W9 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.52□□□□□ -1.85
Hmgb4Q6P8W9 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Hmgb4Q6P8W9 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Hmgb4Q6P8W9 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Hmgb4Q6P8W9 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC3.51□□□□□ -1.85
Hmgb4Q6P8W9 n-R5s31-201ENSMUST00000104162 110 ntBASIC3.51□□□□□ -1.85
Hmgb4Q6P8W9 Gm13314-201ENSMUST00000118742 335 ntBASIC3.51□□□□□ -1.85
Hmgb4Q6P8W9 Gm12044-201ENSMUST00000120335 213 ntBASIC3.51□□□□□ -1.85
Hmgb4Q6P8W9 Gm11321-201ENSMUST00000121257 902 ntBASIC3.51□□□□□ -1.85
Hmgb4Q6P8W9 Gm12706-201ENSMUST00000121588 698 ntBASIC3.51□□□□□ -1.85
Hmgb4Q6P8W9 Gm12095-201ENSMUST00000121962 816 ntBASIC3.51□□□□□ -1.85
Hmgb4Q6P8W9 Gm15147-201ENSMUST00000122263 483 ntBASIC3.51□□□□□ -1.85
Hmgb4Q6P8W9 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC3.51□□□□□ -1.85
Hmgb4Q6P8W9 Gm25438-201ENSMUST00000158281 110 ntBASIC3.51□□□□□ -1.85
Hmgb4Q6P8W9 Ear-ps12-201ENSMUST00000161720 451 ntBASIC3.51□□□□□ -1.85
Hmgb4Q6P8W9 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Hmgb4Q6P8W9 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC3.51□□□□□ -1.85
Hmgb4Q6P8W9 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
Hmgb4Q6P8W9 Ighv1-28-201ENSMUST00000192987 351 ntBASIC3.51□□□□□ -1.85
Hmgb4Q6P8W9 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC3.51□□□□□ -1.85
Hmgb4Q6P8W9 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC3.51□□□□□ -1.85
Hmgb4Q6P8W9 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC3.51□□□□□ -1.85
Hmgb4Q6P8W9 Gm34091-201ENSMUST00000200875 604 ntBASIC3.51□□□□□ -1.85
Hmgb4Q6P8W9 AC124542.1-201ENSMUST00000205588 908 ntBASIC3.51□□□□□ -1.85
Hmgb4Q6P8W9 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC3.51□□□□□ -1.85
Hmgb4Q6P8W9 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.51□□□□□ -1.85
Hmgb4Q6P8W9 AC133176.1-201ENSMUST00000226668 219 ntBASIC3.51□□□□□ -1.85
Hmgb4Q6P8W9 AC134420.1-201ENSMUST00000227027 289 ntBASIC3.51□□□□□ -1.85
Hmgb4Q6P8W9 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Hmgb4Q6P8W9 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC3.51□□□□□ -1.85
Hmgb4Q6P8W9 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Hmgb4Q6P8W9 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC3.51□□□□□ -1.85
Hmgb4Q6P8W9 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.51□□□□□ -1.85
Hmgb4Q6P8W9 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
Hmgb4Q6P8W9 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
Hmgb4Q6P8W9 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
Hmgb4Q6P8W9 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Hmgb4Q6P8W9 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
Hmgb4Q6P8W9 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
Hmgb4Q6P8W9 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3.5□□□□□ -1.85
Hmgb4Q6P8W9 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Hmgb4Q6P8W9 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Hmgb4Q6P8W9 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Hmgb4Q6P8W9 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Hmgb4Q6P8W9 Gm24430-201ENSMUST00000104077 104 ntBASIC3.5□□□□□ -1.85
Hmgb4Q6P8W9 Gm22591-201ENSMUST00000104243 106 ntBASIC3.5□□□□□ -1.85
Hmgb4Q6P8W9 Gm11598-201ENSMUST00000119257 357 ntBASIC3.5□□□□□ -1.85
Hmgb4Q6P8W9 Gm13239-201ENSMUST00000119920 637 ntBASIC3.5□□□□□ -1.85
Hmgb4Q6P8W9 Gm13868-201ENSMUST00000122411 294 ntBASIC3.5□□□□□ -1.85
Hmgb4Q6P8W9 n-R5s192-201ENSMUST00000122577 119 ntBASIC3.5□□□□□ -1.85
Hmgb4Q6P8W9 Gm24836-201ENSMUST00000122609 108 ntBASIC3.5□□□□□ -1.85
Hmgb4Q6P8W9 Gm22718-201ENSMUST00000122701 315 ntBASIC3.5□□□□□ -1.85
Hmgb4Q6P8W9 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC3.5□□□□□ -1.85
Hmgb4Q6P8W9 Gm25967-201ENSMUST00000157168 147 ntBASIC3.5□□□□□ -1.85
Hmgb4Q6P8W9 Gm23025-201ENSMUST00000158769 111 ntBASIC3.5□□□□□ -1.85
Hmgb4Q6P8W9 Ear-ps3-201ENSMUST00000168308 445 ntBASIC3.5□□□□□ -1.85
Hmgb4Q6P8W9 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Hmgb4Q6P8W9 Gm43227-201ENSMUST00000202239 677 ntBASIC3.5□□□□□ -1.85
Hmgb4Q6P8W9 Gm7948-201ENSMUST00000212607 844 ntBASIC3.5□□□□□ -1.85
Hmgb4Q6P8W9 AC155923.1-201ENSMUST00000215676 356 ntBASIC3.5□□□□□ -1.85
Hmgb4Q6P8W9 AC152979.1-201ENSMUST00000218214 289 ntBASIC3.5□□□□□ -1.85
Hmgb4Q6P8W9 Gm2446-201ENSMUST00000220144 772 ntBASIC3.5□□□□□ -1.85
Hmgb4Q6P8W9 AC123618.1-201ENSMUST00000220174 360 ntBASIC3.5□□□□□ -1.85
Hmgb4Q6P8W9 Gm8074-201ENSMUST00000095071 252 ntBASIC3.5□□□□□ -1.85
Hmgb4Q6P8W9 BC051076-202ENSMUST00000199477 2868 ntBASIC3.5□□□□□ -1.85
Hmgb4Q6P8W9 AC158805.1-201ENSMUST00000218197 2631 ntBASIC3.5□□□□□ -1.85
Hmgb4Q6P8W9 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Hmgb4Q6P8W9 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.5□□□□□ -1.85
Hmgb4Q6P8W9 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.49□□□□□ -1.85
Hmgb4Q6P8W9 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
Hmgb4Q6P8W9 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Hmgb4Q6P8W9 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Hmgb4Q6P8W9 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.49□□□□□ -1.85
Hmgb4Q6P8W9 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
Hmgb4Q6P8W9 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Hmgb4Q6P8W9 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.49□□□□□ -1.85
Hmgb4Q6P8W9 Gm25376-201ENSMUST00000104340 133 ntBASIC3.49□□□□□ -1.85
Hmgb4Q6P8W9 Gm12393-201ENSMUST00000117084 848 ntBASIC3.49□□□□□ -1.85
Hmgb4Q6P8W9 Gm12598-201ENSMUST00000117333 830 ntBASIC3.49□□□□□ -1.85
Hmgb4Q6P8W9 Gm13873-201ENSMUST00000119208 427 ntBASIC3.49□□□□□ -1.85
Hmgb4Q6P8W9 Gm14945-201ENSMUST00000119556 1118 ntBASIC3.49□□□□□ -1.85
Hmgb4Q6P8W9 Gm11693-201ENSMUST00000119625 565 ntBASIC3.49□□□□□ -1.85
Hmgb4Q6P8W9 Gm15037-201ENSMUST00000120358 259 ntBASIC3.49□□□□□ -1.85
Hmgb4Q6P8W9 Ear-ps10-201ENSMUST00000161871 460 ntBASIC3.49□□□□□ -1.85
Hmgb4Q6P8W9 Gm23269-201ENSMUST00000178701 107 ntBASIC3.49□□□□□ -1.85
Hmgb4Q6P8W9 Mir6413-201ENSMUST00000184049 108 ntBASIC3.49□□□□□ -1.85
Hmgb4Q6P8W9 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Hmgb4Q6P8W9 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC3.49□□□□□ -1.85
Hmgb4Q6P8W9 Gm43217-201ENSMUST00000199513 367 ntBASIC3.49□□□□□ -1.85
Hmgb4Q6P8W9 Gm31230-201ENSMUST00000199725 785 ntBASIC3.49□□□□□ -1.85
Hmgb4Q6P8W9 Gm44990-201ENSMUST00000203922 217 ntBASIC3.49□□□□□ -1.85
Hmgb4Q6P8W9 Gm45614-201ENSMUST00000209994 721 ntBASIC3.49□□□□□ -1.85
Hmgb4Q6P8W9 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC3.49□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms