Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CtcfQ61164 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.96□□□□□ -1.78
CtcfQ61164 Gm23256-201ENSMUST00000102235 110 ntBASIC3.96□□□□□ -1.78
CtcfQ61164 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CtcfQ61164 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CtcfQ61164 Gm26140-201ENSMUST00000103807 110 ntBASIC3.96□□□□□ -1.78
CtcfQ61164 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CtcfQ61164 Gm14299-201ENSMUST00000117586 397 ntBASIC3.96□□□□□ -1.78
CtcfQ61164 Gm16274-201ENSMUST00000139251 592 ntBASIC3.96□□□□□ -1.78
CtcfQ61164 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC3.96□□□□□ -1.78
CtcfQ61164 Gm22816-201ENSMUST00000157450 117 ntBASIC3.96□□□□□ -1.78
CtcfQ61164 Gm22841-201ENSMUST00000158443 62 ntBASIC3.96□□□□□ -1.78
CtcfQ61164 Gm17054-201ENSMUST00000169811 259 ntBASIC3.96□□□□□ -1.78
CtcfQ61164 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC3.96□□□□□ -1.78
CtcfQ61164 Gm27903-201ENSMUST00000175482 126 ntBASIC3.96□□□□□ -1.78
CtcfQ61164 Gm22908-201ENSMUST00000177620 110 ntBASIC3.96□□□□□ -1.78
CtcfQ61164 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC3.96□□□□□ -1.78
CtcfQ61164 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
CtcfQ61164 Mir6341-201ENSMUST00000183490 121 ntBASIC3.96□□□□□ -1.78
CtcfQ61164 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC3.96□□□□□ -1.78
CtcfQ61164 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CtcfQ61164 Gm28779-201ENSMUST00000189678 323 ntBASIC3.96□□□□□ -1.78
CtcfQ61164 Gm42453-201ENSMUST00000200477 409 ntBASIC3.96□□□□□ -1.78
CtcfQ61164 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC3.96□□□□□ -1.78
CtcfQ61164 AC145736.1-201ENSMUST00000214661 479 ntBASIC3.96□□□□□ -1.78
CtcfQ61164 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CtcfQ61164 Gm46146-201ENSMUST00000217483 346 ntBASIC3.96□□□□□ -1.78
CtcfQ61164 CT030242.2-201ENSMUST00000221588 148 ntBASIC3.96□□□□□ -1.78
CtcfQ61164 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC3.96□□□□□ -1.78
CtcfQ61164 mt-Td-201ENSMUST00000082404 70 ntBASIC3.96□□□□□ -1.78
CtcfQ61164 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CtcfQ61164 Gm4855-201ENSMUST00000192270 1967 ntBASIC3.96□□□□□ -1.78
CtcfQ61164 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CtcfQ61164 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.95□□□□□ -1.78
CtcfQ61164 AC158921.1-201ENSMUST00000227861 3468 ntBASIC3.95□□□□□ -1.78
CtcfQ61164 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CtcfQ61164 AC115891.1-201ENSMUST00000215798 1755 ntBASIC3.95□□□□□ -1.78
CtcfQ61164 Gm26075-201ENSMUST00000104062 121 ntBASIC3.95□□□□□ -1.78
CtcfQ61164 Gm26418-201ENSMUST00000104275 137 ntBASIC3.95□□□□□ -1.78
CtcfQ61164 Gm16431-201ENSMUST00000117454 431 ntBASIC3.95□□□□□ -1.78
CtcfQ61164 Gm14358-201ENSMUST00000118458 403 ntBASIC3.95□□□□□ -1.78
CtcfQ61164 Gm14901-201ENSMUST00000119001 283 ntBASIC3.95□□□□□ -1.78
CtcfQ61164 Gm14785-201ENSMUST00000120185 539 ntBASIC3.95□□□□□ -1.78
CtcfQ61164 Mir1898-201ENSMUST00000122643 83 ntBASIC3.95□□□□□ -1.78
CtcfQ61164 Gm24850-201ENSMUST00000158029 119 ntBASIC3.95□□□□□ -1.78
CtcfQ61164 Gm24930-201ENSMUST00000158315 83 ntBASIC3.95□□□□□ -1.78
CtcfQ61164 Gm24315-201ENSMUST00000177835 127 ntBASIC3.95□□□□□ -1.78
CtcfQ61164 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
CtcfQ61164 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CtcfQ61164 Npn2-202ENSMUST00000189275 235 ntBASIC3.95□□□□□ -1.78
CtcfQ61164 Gm19777-201ENSMUST00000191940 358 ntBASIC3.95□□□□□ -1.78
CtcfQ61164 Gm18296-201ENSMUST00000192475 783 ntBASIC3.95□□□□□ -1.78
CtcfQ61164 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC3.95□□□□□ -1.78
CtcfQ61164 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC3.95□□□□□ -1.78
CtcfQ61164 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC3.95□□□□□ -1.78
CtcfQ61164 Gm35857-201ENSMUST00000212739 178 ntBASIC3.95□□□□□ -1.78
CtcfQ61164 AC153971.2-201ENSMUST00000214553 777 ntBASIC3.95□□□□□ -1.78
CtcfQ61164 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CtcfQ61164 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC3.95□□□□□ -1.78
CtcfQ61164 Gm46994-201ENSMUST00000221523 219 ntBASIC3.95□□□□□ -1.78
CtcfQ61164 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CtcfQ61164 AC192334.2-201ENSMUST00000223087 1091 ntBASIC3.95□□□□□ -1.78
CtcfQ61164 CT025157.1-201ENSMUST00000226241 292 ntBASIC3.95□□□□□ -1.78
CtcfQ61164 AC118639.1-204ENSMUST00000226401 694 ntBASIC3.95□□□□□ -1.78
CtcfQ61164 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CtcfQ61164 Gm26108-201ENSMUST00000083973 191 ntBASIC3.95□□□□□ -1.78
CtcfQ61164 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CtcfQ61164 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CtcfQ61164 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
CtcfQ61164 Gm18432-201ENSMUST00000195568 1451 ntBASIC3.94□□□□□ -1.78
CtcfQ61164 Gm43047-201ENSMUST00000200089 3460 ntBASIC3.94□□□□□ -1.78
CtcfQ61164 Gm13803-201ENSMUST00000117547 489 ntBASIC3.94□□□□□ -1.78
CtcfQ61164 Gm13454-201ENSMUST00000118166 483 ntBASIC3.94□□□□□ -1.78
CtcfQ61164 Gm7429-201ENSMUST00000118664 348 ntBASIC3.94□□□□□ -1.78
CtcfQ61164 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CtcfQ61164 Gm15037-201ENSMUST00000120358 259 ntBASIC3.94□□□□□ -1.78
CtcfQ61164 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC3.94□□□□□ -1.78
CtcfQ61164 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CtcfQ61164 Mup-ps2-201ENSMUST00000142602 533 ntBASIC3.94□□□□□ -1.78
CtcfQ61164 Gm24910-201ENSMUST00000157289 272 ntBASIC3.94□□□□□ -1.78
CtcfQ61164 Gm23234-201ENSMUST00000157304 134 ntBASIC3.94□□□□□ -1.78
CtcfQ61164 Gm20462-201ENSMUST00000172623 408 ntBASIC3.94□□□□□ -1.78
CtcfQ61164 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC3.94□□□□□ -1.78
CtcfQ61164 Mir3112-201ENSMUST00000175431 82 ntBASIC3.94□□□□□ -1.78
CtcfQ61164 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CtcfQ61164 Gm28474-201ENSMUST00000188501 315 ntBASIC3.94□□□□□ -1.78
CtcfQ61164 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC3.94□□□□□ -1.78
CtcfQ61164 Gm17781-201ENSMUST00000195232 649 ntBASIC3.94□□□□□ -1.78
CtcfQ61164 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CtcfQ61164 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC3.94□□□□□ -1.78
CtcfQ61164 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC3.94□□□□□ -1.78
CtcfQ61164 CT030184.1-201ENSMUST00000222393 416 ntBASIC3.94□□□□□ -1.78
CtcfQ61164 AC138667.2-201ENSMUST00000224880 598 ntBASIC3.94□□□□□ -1.78
CtcfQ61164 Gm22977-201ENSMUST00000082615 107 ntBASIC3.94□□□□□ -1.78
CtcfQ61164 Gm23423-201ENSMUST00000082782 106 ntBASIC3.94□□□□□ -1.78
CtcfQ61164 Gm26165-201ENSMUST00000083791 138 ntBASIC3.94□□□□□ -1.78
CtcfQ61164 Gm14415-201ENSMUST00000118260 1578 ntBASIC3.93□□□□□ -1.78
CtcfQ61164 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CtcfQ61164 Gm17976-201ENSMUST00000184037 1909 ntBASIC3.93□□□□□ -1.78
CtcfQ61164 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms