Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm22019-201ENSMUST00000104359 96 ntBASIC2.19□□□□□ -2.06
Trav5d-4Q5R1F6 Gm9440-201ENSMUST00000119667 539 ntBASIC2.19□□□□□ -2.06
Trav5d-4Q5R1F6 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.19□□□□□ -2.06
Trav5d-4Q5R1F6 Gm22957-201ENSMUST00000122511 123 ntBASIC2.19□□□□□ -2.06
Trav5d-4Q5R1F6 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Trav5d-4Q5R1F6 Gm17204-201ENSMUST00000167936 478 ntBASIC2.19□□□□□ -2.06
Trav5d-4Q5R1F6 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Trav5d-4Q5R1F6 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC2.19□□□□□ -2.06
Trav5d-4Q5R1F6 Mir3965-201ENSMUST00000175570 69 ntBASIC2.19□□□□□ -2.06
Trav5d-4Q5R1F6 Mir8103-201ENSMUST00000183945 107 ntBASIC2.19□□□□□ -2.06
Trav5d-4Q5R1F6 Gm27249-201ENSMUST00000185049 328 ntBASIC2.19□□□□□ -2.06
Trav5d-4Q5R1F6 Gm28647-201ENSMUST00000188416 197 ntBASIC2.19□□□□□ -2.06
Trav5d-4Q5R1F6 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Trav5d-4Q5R1F6 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
Trav5d-4Q5R1F6 Gm29524-201ENSMUST00000190819 699 ntBASIC2.19□□□□□ -2.06
Trav5d-4Q5R1F6 Gm29523-201ENSMUST00000191415 699 ntBASIC2.19□□□□□ -2.06
Trav5d-4Q5R1F6 Gm38076-201ENSMUST00000193889 450 ntBASIC2.19□□□□□ -2.06
Trav5d-4Q5R1F6 Gm44476-201ENSMUST00000196225 91 ntBASIC2.19□□□□□ -2.06
Trav5d-4Q5R1F6 Gm6615-201ENSMUST00000199426 631 ntBASIC2.19□□□□□ -2.06
Trav5d-4Q5R1F6 Gm43675-201ENSMUST00000199468 1184 ntBASIC2.19□□□□□ -2.06
Trav5d-4Q5R1F6 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Trav5d-4Q5R1F6 Gm42896-201ENSMUST00000201249 1113 ntBASIC2.19□□□□□ -2.06
Trav5d-4Q5R1F6 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC2.19□□□□□ -2.06
Trav5d-4Q5R1F6 Gm44332-201ENSMUST00000203712 433 ntBASIC2.19□□□□□ -2.06
Trav5d-4Q5R1F6 Gm18855-201ENSMUST00000206689 570 ntBASIC2.19□□□□□ -2.06
Trav5d-4Q5R1F6 Gm44903-201ENSMUST00000206840 130 ntBASIC2.19□□□□□ -2.06
Trav5d-4Q5R1F6 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC2.19□□□□□ -2.06
Trav5d-4Q5R1F6 Gm45879-201ENSMUST00000212521 392 ntBASIC2.19□□□□□ -2.06
Trav5d-4Q5R1F6 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Trav5d-4Q5R1F6 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.19□□□□□ -2.06
Trav5d-4Q5R1F6 Gm9174-201ENSMUST00000078149 255 ntBASIC2.19□□□□□ -2.06
Trav5d-4Q5R1F6 Gm6030-201ENSMUST00000078768 402 ntBASIC2.19□□□□□ -2.06
Trav5d-4Q5R1F6 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.19□□□□□ -2.06
Trav5d-4Q5R1F6 Gm22249-201ENSMUST00000082485 136 ntBASIC2.19□□□□□ -2.06
Trav5d-4Q5R1F6 Gm23846-201ENSMUST00000083835 107 ntBASIC2.19□□□□□ -2.06
Trav5d-4Q5R1F6 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
Trav5d-4Q5R1F6 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
Trav5d-4Q5R1F6 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Trav5d-4Q5R1F6 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
Trav5d-4Q5R1F6 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Trav5d-4Q5R1F6 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.18□□□□□ -2.06
Trav5d-4Q5R1F6 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Trav5d-4Q5R1F6 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC2.18□□□□□ -2.06
Trav5d-4Q5R1F6 Gm22225-201ENSMUST00000157358 278 ntBASIC2.18□□□□□ -2.06
Trav5d-4Q5R1F6 Gm22849-201ENSMUST00000157713 307 ntBASIC2.18□□□□□ -2.06
Trav5d-4Q5R1F6 Gm24436-201ENSMUST00000157889 302 ntBASIC2.18□□□□□ -2.06
Trav5d-4Q5R1F6 Gm16232-201ENSMUST00000162856 167 ntBASIC2.18□□□□□ -2.06
Trav5d-4Q5R1F6 Gm5929-201ENSMUST00000166883 487 ntBASIC2.18□□□□□ -2.06
Trav5d-4Q5R1F6 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Trav5d-4Q5R1F6 Gm9587-201ENSMUST00000172449 454 ntBASIC2.18□□□□□ -2.06
Trav5d-4Q5R1F6 Gm25476-201ENSMUST00000175125 185 ntBASIC2.18□□□□□ -2.06
Trav5d-4Q5R1F6 Gm23402-201ENSMUST00000178130 107 ntBASIC2.18□□□□□ -2.06
Trav5d-4Q5R1F6 Mir6401-201ENSMUST00000184499 109 ntBASIC2.18□□□□□ -2.06
Trav5d-4Q5R1F6 Mir6363-201ENSMUST00000184880 114 ntBASIC2.18□□□□□ -2.06
Trav5d-4Q5R1F6 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC2.18□□□□□ -2.06
Trav5d-4Q5R1F6 Gm38311-201ENSMUST00000192945 165 ntBASIC2.18□□□□□ -2.06
Trav5d-4Q5R1F6 Gm44060-201ENSMUST00000204440 410 ntBASIC2.18□□□□□ -2.06
Trav5d-4Q5R1F6 Gm45226-201ENSMUST00000206602 288 ntBASIC2.18□□□□□ -2.06
Trav5d-4Q5R1F6 Gm45687-201ENSMUST00000209454 155 ntBASIC2.18□□□□□ -2.06
Trav5d-4Q5R1F6 Gm6991-201ENSMUST00000218475 1178 ntBASIC2.18□□□□□ -2.06
Trav5d-4Q5R1F6 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC2.18□□□□□ -2.06
Trav5d-4Q5R1F6 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Trav5d-4Q5R1F6 AC154184.2-201ENSMUST00000225335 349 ntBASIC2.18□□□□□ -2.06
Trav5d-4Q5R1F6 AC159242.1-201ENSMUST00000225832 194 ntBASIC2.18□□□□□ -2.06
Trav5d-4Q5R1F6 AC137871.2-201ENSMUST00000226482 289 ntBASIC2.18□□□□□ -2.06
Trav5d-4Q5R1F6 CT030662.1-201ENSMUST00000227380 232 ntBASIC2.18□□□□□ -2.06
Trav5d-4Q5R1F6 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC2.18□□□□□ -2.06
Trav5d-4Q5R1F6 Mir325-201ENSMUST00000083491 98 ntBASIC2.18□□□□□ -2.06
Trav5d-4Q5R1F6 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Trav5d-4Q5R1F6 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC2.18□□□□□ -2.06
Trav5d-4Q5R1F6 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Trav5d-4Q5R1F6 AC124746.1-201ENSMUST00000227535 1300 ntBASIC2.17□□□□□ -2.06
Trav5d-4Q5R1F6 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Trav5d-4Q5R1F6 Mir667-201ENSMUST00000102441 92 ntBASIC2.17□□□□□ -2.06
Trav5d-4Q5R1F6 Gm13678-201ENSMUST00000118926 340 ntBASIC2.17□□□□□ -2.06
Trav5d-4Q5R1F6 Gm12383-201ENSMUST00000120628 760 ntBASIC2.17□□□□□ -2.06
Trav5d-4Q5R1F6 Gm23600-201ENSMUST00000157260 71 ntBASIC2.17□□□□□ -2.06
Trav5d-4Q5R1F6 Gm23599-201ENSMUST00000157261 251 ntBASIC2.17□□□□□ -2.06
Trav5d-4Q5R1F6 Gm8338-201ENSMUST00000163928 363 ntBASIC2.17□□□□□ -2.06
Trav5d-4Q5R1F6 Gm24757-201ENSMUST00000176987 371 ntBASIC2.17□□□□□ -2.06
Trav5d-4Q5R1F6 Gm25598-201ENSMUST00000179031 107 ntBASIC2.17□□□□□ -2.06
Trav5d-4Q5R1F6 Gm27155-201ENSMUST00000183716 898 ntBASIC2.17□□□□□ -2.06
Trav5d-4Q5R1F6 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.17□□□□□ -2.06
Trav5d-4Q5R1F6 Gm3933-201ENSMUST00000195391 439 ntBASIC2.17□□□□□ -2.06
Trav5d-4Q5R1F6 Gm9632-201ENSMUST00000195934 643 ntBASIC2.17□□□□□ -2.06
Trav5d-4Q5R1F6 Gm42593-201ENSMUST00000198469 377 ntBASIC2.17□□□□□ -2.06
Trav5d-4Q5R1F6 Gm44526-201ENSMUST00000204664 121 ntBASIC2.17□□□□□ -2.06
Trav5d-4Q5R1F6 Gm45678-201ENSMUST00000210509 295 ntBASIC2.17□□□□□ -2.06
Trav5d-4Q5R1F6 AC145736.1-201ENSMUST00000214661 479 ntBASIC2.17□□□□□ -2.06
Trav5d-4Q5R1F6 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Trav5d-4Q5R1F6 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.17□□□□□ -2.06
Trav5d-4Q5R1F6 Gm25810-201ENSMUST00000082752 108 ntBASIC2.17□□□□□ -2.06
Trav5d-4Q5R1F6 Mir193a-201ENSMUST00000083461 66 ntBASIC2.17□□□□□ -2.06
Trav5d-4Q5R1F6 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
Trav5d-4Q5R1F6 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Trav5d-4Q5R1F6 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.17□□□□□ -2.06
Trav5d-4Q5R1F6 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Trav5d-4Q5R1F6 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Trav5d-4Q5R1F6 Gm43326-201ENSMUST00000198459 1638 ntBASIC2.17□□□□□ -2.06
Trav5d-4Q5R1F6 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 90 ms