Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
Trav6-3Q5R1E6 Gm19498-201ENSMUST00000191128 331 ntBASIC2.31□□□□□ -2.04
Trav6-3Q5R1E6 Gm43932-201ENSMUST00000204499 52 ntBASIC2.31□□□□□ -2.04
Trav6-3Q5R1E6 Gm45380-201ENSMUST00000210465 315 ntBASIC2.31□□□□□ -2.04
Trav6-3Q5R1E6 Gm45439-201ENSMUST00000211723 359 ntBASIC2.31□□□□□ -2.04
Trav6-3Q5R1E6 Gm18729-201ENSMUST00000217230 621 ntBASIC2.31□□□□□ -2.04
Trav6-3Q5R1E6 AC152951.1-201ENSMUST00000218907 266 ntBASIC2.31□□□□□ -2.04
Trav6-3Q5R1E6 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC2.31□□□□□ -2.04
Trav6-3Q5R1E6 AC126275.2-201ENSMUST00000225224 253 ntBASIC2.31□□□□□ -2.04
Trav6-3Q5R1E6 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Trav6-3Q5R1E6 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Trav6-3Q5R1E6 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Trav6-3Q5R1E6 Gm22245-201ENSMUST00000082479 103 ntBASIC2.31□□□□□ -2.04
Trav6-3Q5R1E6 Gm23297-201ENSMUST00000083184 127 ntBASIC2.31□□□□□ -2.04
Trav6-3Q5R1E6 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Trav6-3Q5R1E6 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Trav6-3Q5R1E6 Gm45039-201ENSMUST00000209181 3477 ntBASIC2.31□□□□□ -2.04
Trav6-3Q5R1E6 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC2.31□□□□□ -2.04
Trav6-3Q5R1E6 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Trav6-3Q5R1E6 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Trav6-3Q5R1E6 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Trav6-3Q5R1E6 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
Trav6-3Q5R1E6 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Trav6-3Q5R1E6 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Trav6-3Q5R1E6 Gm23577-201ENSMUST00000103950 110 ntBASIC2.3□□□□□ -2.04
Trav6-3Q5R1E6 Gm25764-201ENSMUST00000104092 134 ntBASIC2.3□□□□□ -2.04
Trav6-3Q5R1E6 Gm14128-201ENSMUST00000119514 1011 ntBASIC2.3□□□□□ -2.04
Trav6-3Q5R1E6 Gm16412-201ENSMUST00000121602 273 ntBASIC2.3□□□□□ -2.04
Trav6-3Q5R1E6 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC2.3□□□□□ -2.04
Trav6-3Q5R1E6 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC2.3□□□□□ -2.04
Trav6-3Q5R1E6 Gm8289-201ENSMUST00000144814 1182 ntBASIC2.3□□□□□ -2.04
Trav6-3Q5R1E6 Gm25334-201ENSMUST00000158036 110 ntBASIC2.3□□□□□ -2.04
Trav6-3Q5R1E6 Gm23895-201ENSMUST00000158108 160 ntBASIC2.3□□□□□ -2.04
Trav6-3Q5R1E6 Gm10177-202ENSMUST00000161698 207 ntBASIC2.3□□□□□ -2.04
Trav6-3Q5R1E6 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC2.3□□□□□ -2.04
Trav6-3Q5R1E6 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC2.3□□□□□ -2.04
Trav6-3Q5R1E6 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Trav6-3Q5R1E6 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC2.3□□□□□ -2.04
Trav6-3Q5R1E6 Gm28155-201ENSMUST00000191066 151 ntBASIC2.3□□□□□ -2.04
Trav6-3Q5R1E6 Gm38280-201ENSMUST00000192610 158 ntBASIC2.3□□□□□ -2.04
Trav6-3Q5R1E6 Trbv12-3-201ENSMUST00000192675 372 ntBASIC2.3□□□□□ -2.04
Trav6-3Q5R1E6 Gm37213-201ENSMUST00000193077 586 ntBASIC2.3□□□□□ -2.04
Trav6-3Q5R1E6 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC2.3□□□□□ -2.04
Trav6-3Q5R1E6 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Trav6-3Q5R1E6 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC2.3□□□□□ -2.04
Trav6-3Q5R1E6 Gm44513-201ENSMUST00000206811 439 ntBASIC2.3□□□□□ -2.04
Trav6-3Q5R1E6 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC2.3□□□□□ -2.04
Trav6-3Q5R1E6 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC2.3□□□□□ -2.04
Trav6-3Q5R1E6 AC145736.1-201ENSMUST00000214661 479 ntBASIC2.3□□□□□ -2.04
Trav6-3Q5R1E6 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC2.3□□□□□ -2.04
Trav6-3Q5R1E6 AC154636.3-201ENSMUST00000221489 1214 ntBASIC2.3□□□□□ -2.04
Trav6-3Q5R1E6 AC133176.1-201ENSMUST00000226668 219 ntBASIC2.3□□□□□ -2.04
Trav6-3Q5R1E6 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Trav6-3Q5R1E6 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Trav6-3Q5R1E6 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Trav6-3Q5R1E6 Gm10038-201ENSMUST00000077233 441 ntBASIC2.3□□□□□ -2.04
Trav6-3Q5R1E6 Gm24622-201ENSMUST00000082619 162 ntBASIC2.3□□□□□ -2.04
Trav6-3Q5R1E6 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC2.3□□□□□ -2.04
Trav6-3Q5R1E6 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Trav6-3Q5R1E6 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Trav6-3Q5R1E6 Gm8473-201ENSMUST00000176697 1885 ntBASIC2.29□□□□□ -2.04
Trav6-3Q5R1E6 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC2.29□□□□□ -2.04
Trav6-3Q5R1E6 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Trav6-3Q5R1E6 Gm42483-201ENSMUST00000197556 1742 ntBASIC2.29□□□□□ -2.04
Trav6-3Q5R1E6 Gm20541-201ENSMUST00000173035 1406 ntBASIC2.29□□□□□ -2.04
Trav6-3Q5R1E6 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Trav6-3Q5R1E6 Gm3940-201ENSMUST00000105087 432 ntBASIC2.29□□□□□ -2.04
Trav6-3Q5R1E6 Gm16171-201ENSMUST00000118004 324 ntBASIC2.29□□□□□ -2.04
Trav6-3Q5R1E6 Gm14897-201ENSMUST00000118213 207 ntBASIC2.29□□□□□ -2.04
Trav6-3Q5R1E6 Gm11268-201ENSMUST00000118347 267 ntBASIC2.29□□□□□ -2.04
Trav6-3Q5R1E6 Gm14669-201ENSMUST00000118841 250 ntBASIC2.29□□□□□ -2.04
Trav6-3Q5R1E6 Gm12016-201ENSMUST00000119079 681 ntBASIC2.29□□□□□ -2.04
Trav6-3Q5R1E6 Gm14506-201ENSMUST00000121165 536 ntBASIC2.29□□□□□ -2.04
Trav6-3Q5R1E6 Gm11229-201ENSMUST00000121993 437 ntBASIC2.29□□□□□ -2.04
Trav6-3Q5R1E6 Gm14578-201ENSMUST00000122166 391 ntBASIC2.29□□□□□ -2.04
Trav6-3Q5R1E6 Gm23887-201ENSMUST00000122683 172 ntBASIC2.29□□□□□ -2.04
Trav6-3Q5R1E6 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
Trav6-3Q5R1E6 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC2.29□□□□□ -2.04
Trav6-3Q5R1E6 Gm22330-201ENSMUST00000158068 115 ntBASIC2.29□□□□□ -2.04
Trav6-3Q5R1E6 Gm23409-201ENSMUST00000158516 237 ntBASIC2.29□□□□□ -2.04
Trav6-3Q5R1E6 Gm25977-201ENSMUST00000158697 85 ntBASIC2.29□□□□□ -2.04
Trav6-3Q5R1E6 Gm24736-201ENSMUST00000158862 130 ntBASIC2.29□□□□□ -2.04
Trav6-3Q5R1E6 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC2.29□□□□□ -2.04
Trav6-3Q5R1E6 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC2.29□□□□□ -2.04
Trav6-3Q5R1E6 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Trav6-3Q5R1E6 Gm24968-201ENSMUST00000179817 107 ntBASIC2.29□□□□□ -2.04
Trav6-3Q5R1E6 Gm7870-201ENSMUST00000184467 616 ntBASIC2.29□□□□□ -2.04
Trav6-3Q5R1E6 Gm27163-201ENSMUST00000184767 409 ntBASIC2.29□□□□□ -2.04
Trav6-3Q5R1E6 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC2.29□□□□□ -2.04
Trav6-3Q5R1E6 Gm38075-201ENSMUST00000191979 920 ntBASIC2.29□□□□□ -2.04
Trav6-3Q5R1E6 Gm36974-201ENSMUST00000194200 1071 ntBASIC2.29□□□□□ -2.04
Trav6-3Q5R1E6 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC2.29□□□□□ -2.04
Trav6-3Q5R1E6 Gm37290-201ENSMUST00000195775 339 ntBASIC2.29□□□□□ -2.04
Trav6-3Q5R1E6 Gm43115-201ENSMUST00000196244 160 ntBASIC2.29□□□□□ -2.04
Trav6-3Q5R1E6 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC2.29□□□□□ -2.04
Trav6-3Q5R1E6 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC2.29□□□□□ -2.04
Trav6-3Q5R1E6 AC153968.2-201ENSMUST00000215579 1140 ntBASIC2.29□□□□□ -2.04
Trav6-3Q5R1E6 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC2.29□□□□□ -2.04
Trav6-3Q5R1E6 Gm31849-201ENSMUST00000220306 375 ntBASIC2.29□□□□□ -2.04
Trav6-3Q5R1E6 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC2.29□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms