Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm45884-201ENSMUST00000209540 3416 ntBASIC3.09□□□□□ -1.92
Trim40Q3UWA4 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Trim40Q3UWA4 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Trim40Q3UWA4 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Trim40Q3UWA4 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Trim40Q3UWA4 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
Trim40Q3UWA4 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC3.08□□□□□ -1.92
Trim40Q3UWA4 Gm23948-201ENSMUST00000104030 132 ntBASIC3.08□□□□□ -1.92
Trim40Q3UWA4 Gm24855-201ENSMUST00000104848 97 ntBASIC3.08□□□□□ -1.92
Trim40Q3UWA4 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Trim40Q3UWA4 Gm15113-201ENSMUST00000119280 836 ntBASIC3.08□□□□□ -1.92
Trim40Q3UWA4 Gm12706-201ENSMUST00000121588 698 ntBASIC3.08□□□□□ -1.92
Trim40Q3UWA4 Gm11358-201ENSMUST00000122310 373 ntBASIC3.08□□□□□ -1.92
Trim40Q3UWA4 Gm23540-201ENSMUST00000157543 164 ntBASIC3.08□□□□□ -1.92
Trim40Q3UWA4 Gm23666-201ENSMUST00000158053 116 ntBASIC3.08□□□□□ -1.92
Trim40Q3UWA4 Gm22765-201ENSMUST00000158371 128 ntBASIC3.08□□□□□ -1.92
Trim40Q3UWA4 Gm4479-201ENSMUST00000178807 171 ntBASIC3.08□□□□□ -1.92
Trim40Q3UWA4 Gm22917-201ENSMUST00000180116 110 ntBASIC3.08□□□□□ -1.92
Trim40Q3UWA4 Gm26701-201ENSMUST00000181571 234 ntBASIC3.08□□□□□ -1.92
Trim40Q3UWA4 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC3.08□□□□□ -1.92
Trim40Q3UWA4 Mir3473f-201ENSMUST00000183743 136 ntBASIC3.08□□□□□ -1.92
Trim40Q3UWA4 Gm28146-201ENSMUST00000185517 701 ntBASIC3.08□□□□□ -1.92
Trim40Q3UWA4 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Trim40Q3UWA4 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.08□□□□□ -1.92
Trim40Q3UWA4 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Trim40Q3UWA4 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC3.08□□□□□ -1.92
Trim40Q3UWA4 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Trim40Q3UWA4 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Trim40Q3UWA4 Gm6510-201ENSMUST00000195916 574 ntBASIC3.08□□□□□ -1.92
Trim40Q3UWA4 Gm43582-201ENSMUST00000196149 343 ntBASIC3.08□□□□□ -1.92
Trim40Q3UWA4 Gm18429-201ENSMUST00000198707 421 ntBASIC3.08□□□□□ -1.92
Trim40Q3UWA4 Gm44650-201ENSMUST00000206929 194 ntBASIC3.08□□□□□ -1.92
Trim40Q3UWA4 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC3.08□□□□□ -1.92
Trim40Q3UWA4 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC3.08□□□□□ -1.92
Trim40Q3UWA4 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC3.08□□□□□ -1.92
Trim40Q3UWA4 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC3.08□□□□□ -1.92
Trim40Q3UWA4 Gm2446-201ENSMUST00000220144 772 ntBASIC3.08□□□□□ -1.92
Trim40Q3UWA4 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC3.08□□□□□ -1.92
Trim40Q3UWA4 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Trim40Q3UWA4 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Trim40Q3UWA4 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Trim40Q3UWA4 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC3.08□□□□□ -1.92
Trim40Q3UWA4 Gm25480-201ENSMUST00000083217 133 ntBASIC3.08□□□□□ -1.92
Trim40Q3UWA4 Gm25792-201ENSMUST00000083289 100 ntBASIC3.08□□□□□ -1.92
Trim40Q3UWA4 Gm23136-201ENSMUST00000083425 99 ntBASIC3.08□□□□□ -1.92
Trim40Q3UWA4 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Trim40Q3UWA4 Gm16261-201ENSMUST00000096813 205 ntBASIC3.08□□□□□ -1.92
Trim40Q3UWA4 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Trim40Q3UWA4 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Trim40Q3UWA4 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Trim40Q3UWA4 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Trim40Q3UWA4 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
Trim40Q3UWA4 Gm44625-201ENSMUST00000207838 1561 ntBASIC3.08□□□□□ -1.92
Trim40Q3UWA4 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Trim40Q3UWA4 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.08□□□□□ -1.92
Trim40Q3UWA4 Gm12805-201ENSMUST00000117305 1048 ntBASIC3.07□□□□□ -1.92
Trim40Q3UWA4 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC3.07□□□□□ -1.92
Trim40Q3UWA4 Gm9119-201ENSMUST00000118866 495 ntBASIC3.07□□□□□ -1.92
Trim40Q3UWA4 Gm13717-201ENSMUST00000119868 365 ntBASIC3.07□□□□□ -1.92
Trim40Q3UWA4 Gm14815-201ENSMUST00000120060 488 ntBASIC3.07□□□□□ -1.92
Trim40Q3UWA4 Gm11321-201ENSMUST00000121257 902 ntBASIC3.07□□□□□ -1.92
Trim40Q3UWA4 Gm23885-201ENSMUST00000122682 294 ntBASIC3.07□□□□□ -1.92
Trim40Q3UWA4 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC3.07□□□□□ -1.92
Trim40Q3UWA4 Gm16274-201ENSMUST00000139251 592 ntBASIC3.07□□□□□ -1.92
Trim40Q3UWA4 Gm23059-201ENSMUST00000158978 107 ntBASIC3.07□□□□□ -1.92
Trim40Q3UWA4 Ear-ps3-201ENSMUST00000168308 445 ntBASIC3.07□□□□□ -1.92
Trim40Q3UWA4 Fth-ps2-201ENSMUST00000168364 516 ntBASIC3.07□□□□□ -1.92
Trim40Q3UWA4 Gm23053-201ENSMUST00000175136 96 ntBASIC3.07□□□□□ -1.92
Trim40Q3UWA4 Gm23799-201ENSMUST00000175559 120 ntBASIC3.07□□□□□ -1.92
Trim40Q3UWA4 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC3.07□□□□□ -1.92
Trim40Q3UWA4 Gm18396-201ENSMUST00000177095 361 ntBASIC3.07□□□□□ -1.92
Trim40Q3UWA4 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC3.07□□□□□ -1.92
Trim40Q3UWA4 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Trim40Q3UWA4 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC3.07□□□□□ -1.92
Trim40Q3UWA4 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC3.07□□□□□ -1.92
Trim40Q3UWA4 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC3.07□□□□□ -1.92
Trim40Q3UWA4 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC3.07□□□□□ -1.92
Trim40Q3UWA4 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC3.07□□□□□ -1.92
Trim40Q3UWA4 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC3.07□□□□□ -1.92
Trim40Q3UWA4 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC3.07□□□□□ -1.92
Trim40Q3UWA4 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC3.07□□□□□ -1.92
Trim40Q3UWA4 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC3.07□□□□□ -1.92
Trim40Q3UWA4 Gm28648-201ENSMUST00000190092 343 ntBASIC3.07□□□□□ -1.92
Trim40Q3UWA4 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC3.07□□□□□ -1.92
Trim40Q3UWA4 Gm44274-201ENSMUST00000203417 256 ntBASIC3.07□□□□□ -1.92
Trim40Q3UWA4 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Trim40Q3UWA4 Gm8942-201ENSMUST00000217892 400 ntBASIC3.07□□□□□ -1.92
Trim40Q3UWA4 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC3.07□□□□□ -1.92
Trim40Q3UWA4 AC123618.1-201ENSMUST00000220174 360 ntBASIC3.07□□□□□ -1.92
Trim40Q3UWA4 Gm7753-201ENSMUST00000221007 867 ntBASIC3.07□□□□□ -1.92
Trim40Q3UWA4 AC165146.1-201ENSMUST00000223777 900 ntBASIC3.07□□□□□ -1.92
Trim40Q3UWA4 AC154329.2-201ENSMUST00000225257 383 ntBASIC3.07□□□□□ -1.92
Trim40Q3UWA4 AC158521.1-201ENSMUST00000225295 660 ntBASIC3.07□□□□□ -1.92
Trim40Q3UWA4 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Trim40Q3UWA4 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Trim40Q3UWA4 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Trim40Q3UWA4 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Trim40Q3UWA4 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Trim40Q3UWA4 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC3.06□□□□□ -1.92
Trim40Q3UWA4 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms