Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm16363-201ENSMUST00000132460 877 ntBASIC3.01□□□□□ -1.93
Upf3aQ3ULJ3 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Upf3aQ3ULJ3 Gm14368-201ENSMUST00000145305 415 ntBASIC3.01□□□□□ -1.93
Upf3aQ3ULJ3 Gm5958-201ENSMUST00000147698 297 ntBASIC3.01□□□□□ -1.93
Upf3aQ3ULJ3 Mup-ps4-201ENSMUST00000151005 539 ntBASIC3.01□□□□□ -1.93
Upf3aQ3ULJ3 Gm23716-201ENSMUST00000157348 144 ntBASIC3.01□□□□□ -1.93
Upf3aQ3ULJ3 Gm24780-201ENSMUST00000157635 143 ntBASIC3.01□□□□□ -1.93
Upf3aQ3ULJ3 Gm24240-201ENSMUST00000157785 135 ntBASIC3.01□□□□□ -1.93
Upf3aQ3ULJ3 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Upf3aQ3ULJ3 Gm21893-201ENSMUST00000179119 397 ntBASIC3.01□□□□□ -1.93
Upf3aQ3ULJ3 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Upf3aQ3ULJ3 Gm38216-201ENSMUST00000194872 1214 ntBASIC3.01□□□□□ -1.93
Upf3aQ3ULJ3 Gm43489-201ENSMUST00000196810 993 ntBASIC3.01□□□□□ -1.93
Upf3aQ3ULJ3 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC3.01□□□□□ -1.93
Upf3aQ3ULJ3 Gm44404-201ENSMUST00000203979 636 ntBASIC3.01□□□□□ -1.93
Upf3aQ3ULJ3 Gm44727-201ENSMUST00000204225 451 ntBASIC3.01□□□□□ -1.93
Upf3aQ3ULJ3 Gm44157-201ENSMUST00000204720 410 ntBASIC3.01□□□□□ -1.93
Upf3aQ3ULJ3 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Upf3aQ3ULJ3 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC3.01□□□□□ -1.93
Upf3aQ3ULJ3 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC3.01□□□□□ -1.93
Upf3aQ3ULJ3 AC152979.4-201ENSMUST00000219893 379 ntBASIC3.01□□□□□ -1.93
Upf3aQ3ULJ3 CT573085.1-201ENSMUST00000224279 1197 ntBASIC3.01□□□□□ -1.93
Upf3aQ3ULJ3 AC154594.1-201ENSMUST00000225171 1273 ntBASIC3.01□□□□□ -1.93
Upf3aQ3ULJ3 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Upf3aQ3ULJ3 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Upf3aQ3ULJ3 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Upf3aQ3ULJ3 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Upf3aQ3ULJ3 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
Upf3aQ3ULJ3 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
Upf3aQ3ULJ3 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC3.01□□□□□ -1.93
Upf3aQ3ULJ3 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Upf3aQ3ULJ3 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC3□□□□□ -1.93
Upf3aQ3ULJ3 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Upf3aQ3ULJ3 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
Upf3aQ3ULJ3 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Upf3aQ3ULJ3 AC158805.1-201ENSMUST00000218197 2631 ntBASIC3□□□□□ -1.93
Upf3aQ3ULJ3 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Upf3aQ3ULJ3 Gm24340-201ENSMUST00000104208 97 ntBASIC3□□□□□ -1.93
Upf3aQ3ULJ3 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC3□□□□□ -1.93
Upf3aQ3ULJ3 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC3□□□□□ -1.93
Upf3aQ3ULJ3 Gm24922-201ENSMUST00000158511 102 ntBASIC3□□□□□ -1.93
Upf3aQ3ULJ3 Gm24816-201ENSMUST00000175311 151 ntBASIC3□□□□□ -1.93
Upf3aQ3ULJ3 Gm20612-201ENSMUST00000176318 236 ntBASIC3□□□□□ -1.93
Upf3aQ3ULJ3 Mir7242-201ENSMUST00000183710 79 ntBASIC3□□□□□ -1.93
Upf3aQ3ULJ3 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC3□□□□□ -1.93
Upf3aQ3ULJ3 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC3□□□□□ -1.93
Upf3aQ3ULJ3 Mir3073b-201ENSMUST00000199383 60 ntBASIC3□□□□□ -1.93
Upf3aQ3ULJ3 Gm43675-201ENSMUST00000199468 1184 ntBASIC3□□□□□ -1.93
Upf3aQ3ULJ3 Gm44925-201ENSMUST00000208879 2110 ntBASIC3□□□□□ -1.93
Upf3aQ3ULJ3 Gm45452-201ENSMUST00000210905 177 ntBASIC3□□□□□ -1.93
Upf3aQ3ULJ3 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC3□□□□□ -1.93
Upf3aQ3ULJ3 AC160984.2-201ENSMUST00000224927 791 ntBASIC3□□□□□ -1.93
Upf3aQ3ULJ3 AC098719.1-201ENSMUST00000228920 371 ntBASIC3□□□□□ -1.93
Upf3aQ3ULJ3 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Upf3aQ3ULJ3 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
Upf3aQ3ULJ3 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC3□□□□□ -1.93
Upf3aQ3ULJ3 CT009504.1-201ENSMUST00000218252 3330 ntBASIC3□□□□□ -1.93
Upf3aQ3ULJ3 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC3□□□□□ -1.93
Upf3aQ3ULJ3 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC3□□□□□ -1.93
Upf3aQ3ULJ3 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Upf3aQ3ULJ3 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC2.99□□□□□ -1.93
Upf3aQ3ULJ3 Gm43230-201ENSMUST00000200980 2129 ntBASIC2.99□□□□□ -1.93
Upf3aQ3ULJ3 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Upf3aQ3ULJ3 Gm26247-201ENSMUST00000116702 91 ntBASIC2.99□□□□□ -1.93
Upf3aQ3ULJ3 Gm25317-201ENSMUST00000116824 129 ntBASIC2.99□□□□□ -1.93
Upf3aQ3ULJ3 Gm11898-201ENSMUST00000117161 385 ntBASIC2.99□□□□□ -1.93
Upf3aQ3ULJ3 Gm11577-201ENSMUST00000118030 737 ntBASIC2.99□□□□□ -1.93
Upf3aQ3ULJ3 Gm14627-201ENSMUST00000118931 567 ntBASIC2.99□□□□□ -1.93
Upf3aQ3ULJ3 Gm11693-201ENSMUST00000119625 565 ntBASIC2.99□□□□□ -1.93
Upf3aQ3ULJ3 Gm14939-201ENSMUST00000120347 680 ntBASIC2.99□□□□□ -1.93
Upf3aQ3ULJ3 Gm13574-201ENSMUST00000120482 394 ntBASIC2.99□□□□□ -1.93
Upf3aQ3ULJ3 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC2.99□□□□□ -1.93
Upf3aQ3ULJ3 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC2.99□□□□□ -1.93
Upf3aQ3ULJ3 Gm23387-201ENSMUST00000158586 107 ntBASIC2.99□□□□□ -1.93
Upf3aQ3ULJ3 Gm18397-201ENSMUST00000176704 587 ntBASIC2.99□□□□□ -1.93
Upf3aQ3ULJ3 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Upf3aQ3ULJ3 Gm24969-201ENSMUST00000180331 79 ntBASIC2.99□□□□□ -1.93
Upf3aQ3ULJ3 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC2.99□□□□□ -1.93
Upf3aQ3ULJ3 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Upf3aQ3ULJ3 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Upf3aQ3ULJ3 Gm37353-201ENSMUST00000194497 313 ntBASIC2.99□□□□□ -1.93
Upf3aQ3ULJ3 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Upf3aQ3ULJ3 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC2.99□□□□□ -1.93
Upf3aQ3ULJ3 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Upf3aQ3ULJ3 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC2.99□□□□□ -1.93
Upf3aQ3ULJ3 Gm2436-201ENSMUST00000219562 774 ntBASIC2.99□□□□□ -1.93
Upf3aQ3ULJ3 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC2.99□□□□□ -1.93
Upf3aQ3ULJ3 AC134254.5-201ENSMUST00000223436 400 ntBASIC2.99□□□□□ -1.93
Upf3aQ3ULJ3 AC159188.1-201ENSMUST00000225198 526 ntBASIC2.99□□□□□ -1.93
Upf3aQ3ULJ3 AC159242.1-201ENSMUST00000225832 194 ntBASIC2.99□□□□□ -1.93
Upf3aQ3ULJ3 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Upf3aQ3ULJ3 Gm23850-201ENSMUST00000083830 169 ntBASIC2.99□□□□□ -1.93
Upf3aQ3ULJ3 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Upf3aQ3ULJ3 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Upf3aQ3ULJ3 Gm42483-201ENSMUST00000197556 1742 ntBASIC2.99□□□□□ -1.93
Upf3aQ3ULJ3 Gm7905-201ENSMUST00000119933 1386 ntBASIC2.99□□□□□ -1.93
Upf3aQ3ULJ3 Gm6221-201ENSMUST00000180064 1386 ntBASIC2.99□□□□□ -1.93
Upf3aQ3ULJ3 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Upf3aQ3ULJ3 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Upf3aQ3ULJ3 AC124561.2-201ENSMUST00000226657 1973 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms