Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Mir7k-201ENSMUST00000184115 110 ntBASIC3.06□□□□□ -1.92
Trafd1Q3UDK1 Gm27817-201ENSMUST00000184302 233 ntBASIC3.06□□□□□ -1.92
Trafd1Q3UDK1 Igkv2-113-201ENSMUST00000196138 362 ntBASIC3.06□□□□□ -1.92
Trafd1Q3UDK1 Gm43070-201ENSMUST00000196938 415 ntBASIC3.06□□□□□ -1.92
Trafd1Q3UDK1 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.06□□□□□ -1.92
Trafd1Q3UDK1 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Trafd1Q3UDK1 AC111046.1-201ENSMUST00000217715 412 ntBASIC3.06□□□□□ -1.92
Trafd1Q3UDK1 AC152951.1-201ENSMUST00000218907 266 ntBASIC3.06□□□□□ -1.92
Trafd1Q3UDK1 Gm9370-201ENSMUST00000222787 609 ntBASIC3.06□□□□□ -1.92
Trafd1Q3UDK1 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC3.06□□□□□ -1.92
Trafd1Q3UDK1 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Trafd1Q3UDK1 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Trafd1Q3UDK1 Gm24035-201ENSMUST00000082867 107 ntBASIC3.06□□□□□ -1.92
Trafd1Q3UDK1 Gm23939-201ENSMUST00000082880 133 ntBASIC3.06□□□□□ -1.92
Trafd1Q3UDK1 Gm22293-201ENSMUST00000083314 109 ntBASIC3.06□□□□□ -1.92
Trafd1Q3UDK1 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Trafd1Q3UDK1 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Trafd1Q3UDK1 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Trafd1Q3UDK1 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
Trafd1Q3UDK1 Gm43665-201ENSMUST00000198672 1659 ntBASIC3.05□□□□□ -1.92
Trafd1Q3UDK1 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
Trafd1Q3UDK1 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Trafd1Q3UDK1 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
Trafd1Q3UDK1 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Trafd1Q3UDK1 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Trafd1Q3UDK1 Gm24671-201ENSMUST00000104159 158 ntBASIC3.05□□□□□ -1.92
Trafd1Q3UDK1 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Trafd1Q3UDK1 Gm14125-201ENSMUST00000113442 680 ntBASIC3.05□□□□□ -1.92
Trafd1Q3UDK1 Gm12095-201ENSMUST00000121962 816 ntBASIC3.05□□□□□ -1.92
Trafd1Q3UDK1 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC3.05□□□□□ -1.92
Trafd1Q3UDK1 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.05□□□□□ -1.92
Trafd1Q3UDK1 Gm24138-201ENSMUST00000157572 114 ntBASIC3.05□□□□□ -1.92
Trafd1Q3UDK1 Gm23583-201ENSMUST00000158533 289 ntBASIC3.05□□□□□ -1.92
Trafd1Q3UDK1 Gm3102-201ENSMUST00000164236 489 ntBASIC3.05□□□□□ -1.92
Trafd1Q3UDK1 Gm17064-201ENSMUST00000167690 452 ntBASIC3.05□□□□□ -1.92
Trafd1Q3UDK1 Gm23145-201ENSMUST00000178912 79 ntBASIC3.05□□□□□ -1.92
Trafd1Q3UDK1 Gm28560-201ENSMUST00000186091 315 ntBASIC3.05□□□□□ -1.92
Trafd1Q3UDK1 Gm28334-201ENSMUST00000186653 315 ntBASIC3.05□□□□□ -1.92
Trafd1Q3UDK1 Gm28412-201ENSMUST00000187243 177 ntBASIC3.05□□□□□ -1.92
Trafd1Q3UDK1 Gm28495-201ENSMUST00000188452 315 ntBASIC3.05□□□□□ -1.92
Trafd1Q3UDK1 Gm28232-201ENSMUST00000188683 315 ntBASIC3.05□□□□□ -1.92
Trafd1Q3UDK1 Gm28481-201ENSMUST00000189231 315 ntBASIC3.05□□□□□ -1.92
Trafd1Q3UDK1 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC3.05□□□□□ -1.92
Trafd1Q3UDK1 Gm29059-201ENSMUST00000191534 315 ntBASIC3.05□□□□□ -1.92
Trafd1Q3UDK1 Gm37765-201ENSMUST00000192395 315 ntBASIC3.05□□□□□ -1.92
Trafd1Q3UDK1 Gm37237-201ENSMUST00000192893 315 ntBASIC3.05□□□□□ -1.92
Trafd1Q3UDK1 Gm36968-201ENSMUST00000193737 315 ntBASIC3.05□□□□□ -1.92
Trafd1Q3UDK1 Gm7142-201ENSMUST00000194232 586 ntBASIC3.05□□□□□ -1.92
Trafd1Q3UDK1 Gm38290-201ENSMUST00000195238 315 ntBASIC3.05□□□□□ -1.92
Trafd1Q3UDK1 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC3.05□□□□□ -1.92
Trafd1Q3UDK1 Gm18602-201ENSMUST00000209794 851 ntBASIC3.05□□□□□ -1.92
Trafd1Q3UDK1 Gm17850-201ENSMUST00000210023 1154 ntBASIC3.05□□□□□ -1.92
Trafd1Q3UDK1 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Trafd1Q3UDK1 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC3.05□□□□□ -1.92
Trafd1Q3UDK1 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC3.05□□□□□ -1.92
Trafd1Q3UDK1 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.05□□□□□ -1.92
Trafd1Q3UDK1 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC3.05□□□□□ -1.92
Trafd1Q3UDK1 AC155305.1-201ENSMUST00000222207 319 ntBASIC3.05□□□□□ -1.92
Trafd1Q3UDK1 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.05□□□□□ -1.92
Trafd1Q3UDK1 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Trafd1Q3UDK1 Gm22979-201ENSMUST00000082609 159 ntBASIC3.05□□□□□ -1.92
Trafd1Q3UDK1 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Trafd1Q3UDK1 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Trafd1Q3UDK1 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Trafd1Q3UDK1 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
Trafd1Q3UDK1 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Trafd1Q3UDK1 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm26002-201ENSMUST00000101915 107 ntBASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Mir582-201ENSMUST00000103758 81 ntBASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm11943-201ENSMUST00000119473 327 ntBASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm14506-201ENSMUST00000121165 536 ntBASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm16458-201ENSMUST00000121428 502 ntBASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm22956-201ENSMUST00000122520 80 ntBASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm25490-201ENSMUST00000158734 130 ntBASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm23505-201ENSMUST00000158989 130 ntBASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm20773-201ENSMUST00000178940 681 ntBASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm22307-201ENSMUST00000180019 107 ntBASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm26928-201ENSMUST00000182674 572 ntBASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm27893-201ENSMUST00000184408 194 ntBASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm29299-201ENSMUST00000185609 923 ntBASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trafd1Q3UDK1 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 108.4 ms