Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
Ddb1Q3U1J4 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ddb1Q3U1J4 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ddb1Q3U1J4 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Ddb1Q3U1J4 AC156025.1-201ENSMUST00000223597 3551 ntBASIC4.78□□□□□ -1.64
Ddb1Q3U1J4 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Ddb1Q3U1J4 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Ddb1Q3U1J4 Gm9157-201ENSMUST00000117673 225 ntBASIC4.78□□□□□ -1.64
Ddb1Q3U1J4 Gm14240-201ENSMUST00000120353 546 ntBASIC4.78□□□□□ -1.64
Ddb1Q3U1J4 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC4.78□□□□□ -1.64
Ddb1Q3U1J4 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC4.78□□□□□ -1.64
Ddb1Q3U1J4 Gm25490-201ENSMUST00000158734 130 ntBASIC4.78□□□□□ -1.64
Ddb1Q3U1J4 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC4.78□□□□□ -1.64
Ddb1Q3U1J4 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC4.78□□□□□ -1.64
Ddb1Q3U1J4 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC4.78□□□□□ -1.64
Ddb1Q3U1J4 Gm28598-201ENSMUST00000186490 615 ntBASIC4.78□□□□□ -1.64
Ddb1Q3U1J4 Gm28255-201ENSMUST00000187101 694 ntBASIC4.78□□□□□ -1.64
Ddb1Q3U1J4 Gm29268-201ENSMUST00000188669 615 ntBASIC4.78□□□□□ -1.64
Ddb1Q3U1J4 Gm29218-205ENSMUST00000190846 615 ntBASIC4.78□□□□□ -1.64
Ddb1Q3U1J4 Gm5731-201ENSMUST00000190969 481 ntBASIC4.78□□□□□ -1.64
Ddb1Q3U1J4 Gm28978-201ENSMUST00000191120 615 ntBASIC4.78□□□□□ -1.64
Ddb1Q3U1J4 Gm37172-201ENSMUST00000191926 615 ntBASIC4.78□□□□□ -1.64
Ddb1Q3U1J4 Gm38075-201ENSMUST00000191979 920 ntBASIC4.78□□□□□ -1.64
Ddb1Q3U1J4 Gm37869-201ENSMUST00000193385 595 ntBASIC4.78□□□□□ -1.64
Ddb1Q3U1J4 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ddb1Q3U1J4 Gm3010-201ENSMUST00000198805 448 ntBASIC4.78□□□□□ -1.64
Ddb1Q3U1J4 Gm44465-201ENSMUST00000199536 114 ntBASIC4.78□□□□□ -1.64
Ddb1Q3U1J4 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC4.78□□□□□ -1.64
Ddb1Q3U1J4 Gm44818-201ENSMUST00000206608 358 ntBASIC4.78□□□□□ -1.64
Ddb1Q3U1J4 Gm45173-201ENSMUST00000206819 305 ntBASIC4.78□□□□□ -1.64
Ddb1Q3U1J4 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC4.78□□□□□ -1.64
Ddb1Q3U1J4 Gm45327-201ENSMUST00000211612 565 ntBASIC4.78□□□□□ -1.64
Ddb1Q3U1J4 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC4.78□□□□□ -1.64
Ddb1Q3U1J4 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Ddb1Q3U1J4 AC142499.1-201ENSMUST00000220036 374 ntBASIC4.78□□□□□ -1.64
Ddb1Q3U1J4 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC4.78□□□□□ -1.64
Ddb1Q3U1J4 AC139350.4-201ENSMUST00000228483 798 ntBASIC4.78□□□□□ -1.64
Ddb1Q3U1J4 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ddb1Q3U1J4 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Ddb1Q3U1J4 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ddb1Q3U1J4 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Ddb1Q3U1J4 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
Ddb1Q3U1J4 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Ddb1Q3U1J4 AC121997.2-203ENSMUST00000228613 4192 ntBASIC4.78□□□□□ -1.64
Ddb1Q3U1J4 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Ddb1Q3U1J4 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Ddb1Q3U1J4 Gm44078-201ENSMUST00000204652 2646 ntBASIC4.77□□□□□ -1.65
Ddb1Q3U1J4 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Ddb1Q3U1J4 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC4.77□□□□□ -1.65
Ddb1Q3U1J4 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
Ddb1Q3U1J4 AC125532.1-201ENSMUST00000216210 2334 ntBASIC4.77□□□□□ -1.65
Ddb1Q3U1J4 Mir592-201ENSMUST00000102113 96 ntBASIC4.77□□□□□ -1.65
Ddb1Q3U1J4 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Ddb1Q3U1J4 Gm12568-201ENSMUST00000117362 624 ntBASIC4.77□□□□□ -1.65
Ddb1Q3U1J4 Gm14101-201ENSMUST00000121502 473 ntBASIC4.77□□□□□ -1.65
Ddb1Q3U1J4 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Ddb1Q3U1J4 Gm24727-201ENSMUST00000158231 144 ntBASIC4.77□□□□□ -1.65
Ddb1Q3U1J4 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Ddb1Q3U1J4 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Ddb1Q3U1J4 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC4.77□□□□□ -1.65
Ddb1Q3U1J4 Gm8392-201ENSMUST00000185647 835 ntBASIC4.77□□□□□ -1.65
Ddb1Q3U1J4 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC4.77□□□□□ -1.65
Ddb1Q3U1J4 Gm43407-201ENSMUST00000199816 317 ntBASIC4.77□□□□□ -1.65
Ddb1Q3U1J4 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Ddb1Q3U1J4 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC4.77□□□□□ -1.65
Ddb1Q3U1J4 AC159621.1-201ENSMUST00000223249 163 ntBASIC4.77□□□□□ -1.65
Ddb1Q3U1J4 AC192333.2-201ENSMUST00000224771 196 ntBASIC4.77□□□□□ -1.65
Ddb1Q3U1J4 AC115878.1-201ENSMUST00000227247 334 ntBASIC4.77□□□□□ -1.65
Ddb1Q3U1J4 AC126690.1-201ENSMUST00000228898 397 ntBASIC4.77□□□□□ -1.65
Ddb1Q3U1J4 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Ddb1Q3U1J4 Gm22154-201ENSMUST00000083844 131 ntBASIC4.77□□□□□ -1.65
Ddb1Q3U1J4 Snord15a-201ENSMUST00000083888 148 ntBASIC4.77□□□□□ -1.65
Ddb1Q3U1J4 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Ddb1Q3U1J4 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Ddb1Q3U1J4 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Ddb1Q3U1J4 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Ddb1Q3U1J4 Gm14442-201ENSMUST00000119690 1736 ntBASIC4.77□□□□□ -1.65
Ddb1Q3U1J4 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC4.77□□□□□ -1.65
Ddb1Q3U1J4 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Ddb1Q3U1J4 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
Ddb1Q3U1J4 Gm15994-201ENSMUST00000118029 402 ntBASIC4.76□□□□□ -1.65
Ddb1Q3U1J4 Gm12509-201ENSMUST00000118033 609 ntBASIC4.76□□□□□ -1.65
Ddb1Q3U1J4 Gm13454-201ENSMUST00000118166 483 ntBASIC4.76□□□□□ -1.65
Ddb1Q3U1J4 Gm12311-201ENSMUST00000118803 374 ntBASIC4.76□□□□□ -1.65
Ddb1Q3U1J4 Gm6565-201ENSMUST00000121217 438 ntBASIC4.76□□□□□ -1.65
Ddb1Q3U1J4 Gm14530-201ENSMUST00000122391 333 ntBASIC4.76□□□□□ -1.65
Ddb1Q3U1J4 Gm14129-201ENSMUST00000122436 291 ntBASIC4.76□□□□□ -1.65
Ddb1Q3U1J4 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC4.76□□□□□ -1.65
Ddb1Q3U1J4 Gm26088-201ENSMUST00000157896 131 ntBASIC4.76□□□□□ -1.65
Ddb1Q3U1J4 Gm5263-201ENSMUST00000163646 601 ntBASIC4.76□□□□□ -1.65
Ddb1Q3U1J4 Gm9613-201ENSMUST00000171662 196 ntBASIC4.76□□□□□ -1.65
Ddb1Q3U1J4 Gm27161-201ENSMUST00000183960 562 ntBASIC4.76□□□□□ -1.65
Ddb1Q3U1J4 Mir6382-201ENSMUST00000184055 110 ntBASIC4.76□□□□□ -1.65
Ddb1Q3U1J4 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC4.76□□□□□ -1.65
Ddb1Q3U1J4 Gm38032-201ENSMUST00000195052 1589 ntBASIC4.76□□□□□ -1.65
Ddb1Q3U1J4 Gm8041-201ENSMUST00000199755 616 ntBASIC4.76□□□□□ -1.65
Ddb1Q3U1J4 Gm44059-201ENSMUST00000204048 351 ntBASIC4.76□□□□□ -1.65
Ddb1Q3U1J4 Gm43954-201ENSMUST00000204634 544 ntBASIC4.76□□□□□ -1.65
Ddb1Q3U1J4 Gm45232-201ENSMUST00000207811 162 ntBASIC4.76□□□□□ -1.65
Ddb1Q3U1J4 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC4.76□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms