Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Usp39Q3TIX9 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Usp39Q3TIX9 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.14□□□□□ -1.75
Usp39Q3TIX9 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC4.14□□□□□ -1.75
Usp39Q3TIX9 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Usp39Q3TIX9 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
Usp39Q3TIX9 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC4.13□□□□□ -1.75
Usp39Q3TIX9 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
Usp39Q3TIX9 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Usp39Q3TIX9 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Usp39Q3TIX9 Gm38065-201ENSMUST00000193147 3492 ntBASIC4.13□□□□□ -1.75
Usp39Q3TIX9 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Usp39Q3TIX9 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Usp39Q3TIX9 Gm22758-201ENSMUST00000102275 96 ntBASIC4.13□□□□□ -1.75
Usp39Q3TIX9 Gm23744-201ENSMUST00000104231 149 ntBASIC4.13□□□□□ -1.75
Usp39Q3TIX9 Gm11577-201ENSMUST00000118030 737 ntBASIC4.13□□□□□ -1.75
Usp39Q3TIX9 Gm14240-201ENSMUST00000120353 546 ntBASIC4.13□□□□□ -1.75
Usp39Q3TIX9 Gm15926-201ENSMUST00000120492 550 ntBASIC4.13□□□□□ -1.75
Usp39Q3TIX9 Gm23781-201ENSMUST00000157940 308 ntBASIC4.13□□□□□ -1.75
Usp39Q3TIX9 Gm22911-201ENSMUST00000177920 107 ntBASIC4.13□□□□□ -1.75
Usp39Q3TIX9 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Usp39Q3TIX9 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Usp39Q3TIX9 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC4.13□□□□□ -1.75
Usp39Q3TIX9 Gm27760-201ENSMUST00000185048 114 ntBASIC4.13□□□□□ -1.75
Usp39Q3TIX9 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Usp39Q3TIX9 Gm28724-202ENSMUST00000194218 295 ntBASIC4.13□□□□□ -1.75
Usp39Q3TIX9 Gm43730-201ENSMUST00000199863 372 ntBASIC4.13□□□□□ -1.75
Usp39Q3TIX9 Gm5876-201ENSMUST00000203735 243 ntBASIC4.13□□□□□ -1.75
Usp39Q3TIX9 Gm44650-201ENSMUST00000206929 194 ntBASIC4.13□□□□□ -1.75
Usp39Q3TIX9 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC4.13□□□□□ -1.75
Usp39Q3TIX9 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC4.13□□□□□ -1.75
Usp39Q3TIX9 Gm9068-201ENSMUST00000217393 455 ntBASIC4.13□□□□□ -1.75
Usp39Q3TIX9 AC159380.1-201ENSMUST00000218096 121 ntBASIC4.13□□□□□ -1.75
Usp39Q3TIX9 CT571268.1-201ENSMUST00000222320 407 ntBASIC4.13□□□□□ -1.75
Usp39Q3TIX9 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC4.13□□□□□ -1.75
Usp39Q3TIX9 AC126275.2-201ENSMUST00000225224 253 ntBASIC4.13□□□□□ -1.75
Usp39Q3TIX9 AC174459.2-201ENSMUST00000226036 160 ntBASIC4.13□□□□□ -1.75
Usp39Q3TIX9 AC133076.1-201ENSMUST00000228074 484 ntBASIC4.13□□□□□ -1.75
Usp39Q3TIX9 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Usp39Q3TIX9 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Usp39Q3TIX9 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Usp39Q3TIX9 Gm25929-201ENSMUST00000082784 107 ntBASIC4.13□□□□□ -1.75
Usp39Q3TIX9 Gm22829-201ENSMUST00000083771 106 ntBASIC4.13□□□□□ -1.75
Usp39Q3TIX9 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
Usp39Q3TIX9 AC125532.1-201ENSMUST00000216210 2334 ntBASIC4.13□□□□□ -1.75
Usp39Q3TIX9 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Usp39Q3TIX9 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Usp39Q3TIX9 Gm44679-201ENSMUST00000207202 2908 ntBASIC4.13□□□□□ -1.75
Usp39Q3TIX9 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC4.13□□□□□ -1.75
Usp39Q3TIX9 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Usp39Q3TIX9 AC140397.1-201ENSMUST00000225563 4562 ntBASIC4.12□□□□□ -1.75
Usp39Q3TIX9 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Usp39Q3TIX9 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC4.12□□□□□ -1.75
Usp39Q3TIX9 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Usp39Q3TIX9 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC4.12□□□□□ -1.75
Usp39Q3TIX9 Mir147-201ENSMUST00000102354 79 ntBASIC4.12□□□□□ -1.75
Usp39Q3TIX9 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Usp39Q3TIX9 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC4.12□□□□□ -1.75
Usp39Q3TIX9 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Usp39Q3TIX9 Gm11398-201ENSMUST00000120330 320 ntBASIC4.12□□□□□ -1.75
Usp39Q3TIX9 Gm14269-201ENSMUST00000120455 306 ntBASIC4.12□□□□□ -1.75
Usp39Q3TIX9 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC4.12□□□□□ -1.75
Usp39Q3TIX9 Gm25428-201ENSMUST00000157608 114 ntBASIC4.12□□□□□ -1.75
Usp39Q3TIX9 Gm24961-201ENSMUST00000157918 184 ntBASIC4.12□□□□□ -1.75
Usp39Q3TIX9 Gm8807-201ENSMUST00000179328 492 ntBASIC4.12□□□□□ -1.75
Usp39Q3TIX9 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Usp39Q3TIX9 Gm28263-201ENSMUST00000185884 400 ntBASIC4.12□□□□□ -1.75
Usp39Q3TIX9 Gm6802-202ENSMUST00000186566 126 ntBASIC4.12□□□□□ -1.75
Usp39Q3TIX9 Gm29479-201ENSMUST00000190352 455 ntBASIC4.12□□□□□ -1.75
Usp39Q3TIX9 Gm43604-201ENSMUST00000199799 705 ntBASIC4.12□□□□□ -1.75
Usp39Q3TIX9 Gm19908-201ENSMUST00000204684 391 ntBASIC4.12□□□□□ -1.75
Usp39Q3TIX9 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC4.12□□□□□ -1.75
Usp39Q3TIX9 AC093926.1-201ENSMUST00000213730 243 ntBASIC4.12□□□□□ -1.75
Usp39Q3TIX9 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Usp39Q3TIX9 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Usp39Q3TIX9 AC155921.1-201ENSMUST00000216568 3841 ntBASIC4.12□□□□□ -1.75
Usp39Q3TIX9 Gm7093-201ENSMUST00000223004 581 ntBASIC4.12□□□□□ -1.75
Usp39Q3TIX9 AC129308.2-201ENSMUST00000224588 789 ntBASIC4.12□□□□□ -1.75
Usp39Q3TIX9 AC183096.1-201ENSMUST00000226392 130 ntBASIC4.12□□□□□ -1.75
Usp39Q3TIX9 AC158142.1-201ENSMUST00000226721 416 ntBASIC4.12□□□□□ -1.75
Usp39Q3TIX9 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Usp39Q3TIX9 Gm24042-201ENSMUST00000083114 103 ntBASIC4.12□□□□□ -1.75
Usp39Q3TIX9 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
Usp39Q3TIX9 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Usp39Q3TIX9 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Usp39Q3TIX9 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Usp39Q3TIX9 Gm43443-201ENSMUST00000202337 2393 ntBASIC4.12□□□□□ -1.75
Usp39Q3TIX9 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Usp39Q3TIX9 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Usp39Q3TIX9 Gm29325-201ENSMUST00000190705 2528 ntBASIC4.11□□□□□ -1.75
Usp39Q3TIX9 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC4.11□□□□□ -1.75
Usp39Q3TIX9 Gm11673-201ENSMUST00000117846 331 ntBASIC4.11□□□□□ -1.75
Usp39Q3TIX9 Gm14428-201ENSMUST00000120408 822 ntBASIC4.11□□□□□ -1.75
Usp39Q3TIX9 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC4.11□□□□□ -1.75
Usp39Q3TIX9 Gm12872-201ENSMUST00000121835 320 ntBASIC4.11□□□□□ -1.75
Usp39Q3TIX9 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC4.11□□□□□ -1.75
Usp39Q3TIX9 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC4.11□□□□□ -1.75
Usp39Q3TIX9 Gm16250-201ENSMUST00000148974 256 ntBASIC4.11□□□□□ -1.75
Usp39Q3TIX9 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Usp39Q3TIX9 Gm24504-201ENSMUST00000157679 100 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 116.7 ms