Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Col8a1Q00780 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Col8a1Q00780 Gm37527-201ENSMUST00000192406 3547 ntBASIC3.99□□□□□ -1.77
Col8a1Q00780 Gm37268-201ENSMUST00000192254 2614 ntBASIC3.99□□□□□ -1.77
Col8a1Q00780 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Col8a1Q00780 Gm19666-201ENSMUST00000198176 1893 ntBASIC3.99□□□□□ -1.77
Col8a1Q00780 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Col8a1Q00780 Gm43736-201ENSMUST00000196377 2281 ntBASIC3.99□□□□□ -1.77
Col8a1Q00780 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Col8a1Q00780 Gm26075-201ENSMUST00000104062 121 ntBASIC3.99□□□□□ -1.77
Col8a1Q00780 Gm24982-201ENSMUST00000104456 132 ntBASIC3.99□□□□□ -1.77
Col8a1Q00780 Snord98-201ENSMUST00000116819 65 ntBASIC3.99□□□□□ -1.77
Col8a1Q00780 Gm11923-201ENSMUST00000118135 508 ntBASIC3.99□□□□□ -1.77
Col8a1Q00780 Gm14469-201ENSMUST00000118363 202 ntBASIC3.99□□□□□ -1.77
Col8a1Q00780 Gm6071-201ENSMUST00000119561 440 ntBASIC3.99□□□□□ -1.77
Col8a1Q00780 Gm22986-201ENSMUST00000122753 130 ntBASIC3.99□□□□□ -1.77
Col8a1Q00780 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC3.99□□□□□ -1.77
Col8a1Q00780 Gm22816-201ENSMUST00000157450 117 ntBASIC3.99□□□□□ -1.77
Col8a1Q00780 Gm26041-201ENSMUST00000158148 108 ntBASIC3.99□□□□□ -1.77
Col8a1Q00780 Gm24730-201ENSMUST00000158228 117 ntBASIC3.99□□□□□ -1.77
Col8a1Q00780 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Col8a1Q00780 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC3.99□□□□□ -1.77
Col8a1Q00780 Gm26928-201ENSMUST00000182674 572 ntBASIC3.99□□□□□ -1.77
Col8a1Q00780 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Col8a1Q00780 Gm29350-201ENSMUST00000189141 541 ntBASIC3.99□□□□□ -1.77
Col8a1Q00780 Gm37701-201ENSMUST00000192947 1100 ntBASIC3.99□□□□□ -1.77
Col8a1Q00780 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Col8a1Q00780 Gm37817-201ENSMUST00000195276 434 ntBASIC3.99□□□□□ -1.77
Col8a1Q00780 Gm43214-201ENSMUST00000199242 352 ntBASIC3.99□□□□□ -1.77
Col8a1Q00780 Gm18011-201ENSMUST00000203717 565 ntBASIC3.99□□□□□ -1.77
Col8a1Q00780 Gm35931-201ENSMUST00000203931 448 ntBASIC3.99□□□□□ -1.77
Col8a1Q00780 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC3.99□□□□□ -1.77
Col8a1Q00780 Gm18306-201ENSMUST00000207338 569 ntBASIC3.99□□□□□ -1.77
Col8a1Q00780 Gm45207-201ENSMUST00000207469 145 ntBASIC3.99□□□□□ -1.77
Col8a1Q00780 AC160031.2-201ENSMUST00000218242 274 ntBASIC3.99□□□□□ -1.77
Col8a1Q00780 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Col8a1Q00780 AC144819.1-201ENSMUST00000227015 620 ntBASIC3.99□□□□□ -1.77
Col8a1Q00780 Gm23721-201ENSMUST00000083005 107 ntBASIC3.99□□□□□ -1.77
Col8a1Q00780 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Col8a1Q00780 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Col8a1Q00780 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Col8a1Q00780 Gm45853-201ENSMUST00000212310 3171 ntBASIC3.99□□□□□ -1.77
Col8a1Q00780 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Col8a1Q00780 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
Col8a1Q00780 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Col8a1Q00780 Gm37749-201ENSMUST00000193917 1899 ntBASIC3.98□□□□□ -1.77
Col8a1Q00780 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Col8a1Q00780 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
Col8a1Q00780 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Col8a1Q00780 AC154227.1-201ENSMUST00000228809 2467 ntBASIC3.98□□□□□ -1.77
Col8a1Q00780 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Col8a1Q00780 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Col8a1Q00780 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Col8a1Q00780 Mir551b-201ENSMUST00000102165 98 ntBASIC3.98□□□□□ -1.77
Col8a1Q00780 Gm23836-201ENSMUST00000104434 129 ntBASIC3.98□□□□□ -1.77
Col8a1Q00780 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC3.98□□□□□ -1.77
Col8a1Q00780 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Col8a1Q00780 Gm14086-201ENSMUST00000117152 173 ntBASIC3.98□□□□□ -1.77
Col8a1Q00780 Gm11781-201ENSMUST00000118328 472 ntBASIC3.98□□□□□ -1.77
Col8a1Q00780 Gm13755-201ENSMUST00000118509 305 ntBASIC3.98□□□□□ -1.77
Col8a1Q00780 Gm14838-201ENSMUST00000118913 248 ntBASIC3.98□□□□□ -1.77
Col8a1Q00780 Gm13239-201ENSMUST00000119920 637 ntBASIC3.98□□□□□ -1.77
Col8a1Q00780 Gm12785-201ENSMUST00000122052 172 ntBASIC3.98□□□□□ -1.77
Col8a1Q00780 Gm22343-201ENSMUST00000122648 286 ntBASIC3.98□□□□□ -1.77
Col8a1Q00780 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC3.98□□□□□ -1.77
Col8a1Q00780 Gm26278-201ENSMUST00000157098 132 ntBASIC3.98□□□□□ -1.77
Col8a1Q00780 Gm26412-201ENSMUST00000157666 55 ntBASIC3.98□□□□□ -1.77
Col8a1Q00780 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Col8a1Q00780 Mir5134-201ENSMUST00000175529 78 ntBASIC3.98□□□□□ -1.77
Col8a1Q00780 Gm26622-201ENSMUST00000180520 298 ntBASIC3.98□□□□□ -1.77
Col8a1Q00780 Gm27883-201ENSMUST00000183941 102 ntBASIC3.98□□□□□ -1.77
Col8a1Q00780 Gm21673-201ENSMUST00000186640 436 ntBASIC3.98□□□□□ -1.77
Col8a1Q00780 Gm5058-201ENSMUST00000187331 463 ntBASIC3.98□□□□□ -1.77
Col8a1Q00780 Gm21135-201ENSMUST00000189023 436 ntBASIC3.98□□□□□ -1.77
Col8a1Q00780 Gm37128-201ENSMUST00000192599 232 ntBASIC3.98□□□□□ -1.77
Col8a1Q00780 Gm38150-201ENSMUST00000192996 452 ntBASIC3.98□□□□□ -1.77
Col8a1Q00780 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC3.98□□□□□ -1.77
Col8a1Q00780 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC3.98□□□□□ -1.77
Col8a1Q00780 Gm45499-201ENSMUST00000211656 280 ntBASIC3.98□□□□□ -1.77
Col8a1Q00780 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC3.98□□□□□ -1.77
Col8a1Q00780 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC3.98□□□□□ -1.77
Col8a1Q00780 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC3.98□□□□□ -1.77
Col8a1Q00780 AC166358.4-201ENSMUST00000223030 105 ntBASIC3.98□□□□□ -1.77
Col8a1Q00780 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Col8a1Q00780 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Col8a1Q00780 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Col8a1Q00780 Gm25134-201ENSMUST00000082646 160 ntBASIC3.98□□□□□ -1.77
Col8a1Q00780 Gm26164-201ENSMUST00000083793 104 ntBASIC3.98□□□□□ -1.77
Col8a1Q00780 Gm37831-201ENSMUST00000191685 1787 ntBASIC3.98□□□□□ -1.77
Col8a1Q00780 CT025710.1-201ENSMUST00000222949 2533 ntBASIC3.98□□□□□ -1.77
Col8a1Q00780 Gm37143-201ENSMUST00000195180 3259 ntBASIC3.98□□□□□ -1.77
Col8a1Q00780 Gm44925-201ENSMUST00000208879 2110 ntBASIC3.98□□□□□ -1.77
Col8a1Q00780 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Col8a1Q00780 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Col8a1Q00780 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC3.98□□□□□ -1.77
Col8a1Q00780 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Col8a1Q00780 Gm43065-201ENSMUST00000198971 2092 ntBASIC3.98□□□□□ -1.77
Col8a1Q00780 Gm37767-201ENSMUST00000193239 1834 ntBASIC3.98□□□□□ -1.77
Col8a1Q00780 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Col8a1Q00780 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms