Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Lsm6P62313 AC161572.1-201ENSMUST00000227486 640 ntBASIC2.34□□□□□ -2.03
Lsm6P62313 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Lsm6P62313 Gm25739-201ENSMUST00000082886 107 ntBASIC2.34□□□□□ -2.03
Lsm6P62313 n-R5s50-201ENSMUST00000083168 111 ntBASIC2.34□□□□□ -2.03
Lsm6P62313 Gm23096-201ENSMUST00000083447 107 ntBASIC2.34□□□□□ -2.03
Lsm6P62313 Gm22444-201ENSMUST00000093693 108 ntBASIC2.34□□□□□ -2.03
Lsm6P62313 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.34□□□□□ -2.04
Lsm6P62313 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
Lsm6P62313 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
Lsm6P62313 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
Lsm6P62313 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Lsm6P62313 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Lsm6P62313 Gm22497-201ENSMUST00000104499 131 ntBASIC2.33□□□□□ -2.04
Lsm6P62313 Gm11221-201ENSMUST00000117230 597 ntBASIC2.33□□□□□ -2.04
Lsm6P62313 Gm11285-201ENSMUST00000118443 322 ntBASIC2.33□□□□□ -2.04
Lsm6P62313 Gm14940-201ENSMUST00000119309 495 ntBASIC2.33□□□□□ -2.04
Lsm6P62313 Gm12819-201ENSMUST00000122223 629 ntBASIC2.33□□□□□ -2.04
Lsm6P62313 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC2.33□□□□□ -2.04
Lsm6P62313 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.33□□□□□ -2.04
Lsm6P62313 Gm22651-201ENSMUST00000157872 94 ntBASIC2.33□□□□□ -2.04
Lsm6P62313 Gm19203-201ENSMUST00000174049 939 ntBASIC2.33□□□□□ -2.04
Lsm6P62313 Gm24082-201ENSMUST00000175175 83 ntBASIC2.33□□□□□ -2.04
Lsm6P62313 Gm24757-201ENSMUST00000176987 371 ntBASIC2.33□□□□□ -2.04
Lsm6P62313 Gm23190-201ENSMUST00000180307 64 ntBASIC2.33□□□□□ -2.04
Lsm6P62313 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC2.33□□□□□ -2.04
Lsm6P62313 Gm27582-201ENSMUST00000184084 126 ntBASIC2.33□□□□□ -2.04
Lsm6P62313 Gm28647-201ENSMUST00000188416 197 ntBASIC2.33□□□□□ -2.04
Lsm6P62313 Gm6321-201ENSMUST00000194460 1090 ntBASIC2.33□□□□□ -2.04
Lsm6P62313 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC2.33□□□□□ -2.04
Lsm6P62313 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Lsm6P62313 Gm23975-201ENSMUST00000082685 106 ntBASIC2.33□□□□□ -2.04
Lsm6P62313 Gm25199-201ENSMUST00000083095 104 ntBASIC2.33□□□□□ -2.04
Lsm6P62313 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Lsm6P62313 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC2.33□□□□□ -2.04
Lsm6P62313 Gm43326-201ENSMUST00000198459 1638 ntBASIC2.32□□□□□ -2.04
Lsm6P62313 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
Lsm6P62313 Mup-ps13-201ENSMUST00000120662 545 ntBASIC2.32□□□□□ -2.04
Lsm6P62313 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC2.32□□□□□ -2.04
Lsm6P62313 Gm22225-201ENSMUST00000157358 278 ntBASIC2.32□□□□□ -2.04
Lsm6P62313 Gm22390-201ENSMUST00000157588 325 ntBASIC2.32□□□□□ -2.04
Lsm6P62313 Gm25332-201ENSMUST00000158038 105 ntBASIC2.32□□□□□ -2.04
Lsm6P62313 Gm26215-201ENSMUST00000158584 139 ntBASIC2.32□□□□□ -2.04
Lsm6P62313 Gm16236-201ENSMUST00000159588 379 ntBASIC2.32□□□□□ -2.04
Lsm6P62313 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
Lsm6P62313 Gm19200-201ENSMUST00000182579 1001 ntBASIC2.32□□□□□ -2.04
Lsm6P62313 Gm27155-201ENSMUST00000183716 898 ntBASIC2.32□□□□□ -2.04
Lsm6P62313 Gm28623-201ENSMUST00000187219 192 ntBASIC2.32□□□□□ -2.04
Lsm6P62313 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC2.32□□□□□ -2.04
Lsm6P62313 Gm45146-201ENSMUST00000207108 221 ntBASIC2.32□□□□□ -2.04
Lsm6P62313 AC160970.1-201ENSMUST00000219311 475 ntBASIC2.32□□□□□ -2.04
Lsm6P62313 AC124524.1-201ENSMUST00000225833 181 ntBASIC2.32□□□□□ -2.04
Lsm6P62313 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Lsm6P62313 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC2.32□□□□□ -2.04
Lsm6P62313 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Lsm6P62313 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Lsm6P62313 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.32□□□□□ -2.04
Lsm6P62313 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Lsm6P62313 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Lsm6P62313 Gm4855-201ENSMUST00000192270 1967 ntBASIC2.31□□□□□ -2.04
Lsm6P62313 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC2.31□□□□□ -2.04
Lsm6P62313 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC2.31□□□□□ -2.04
Lsm6P62313 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Lsm6P62313 Gm23128-201ENSMUST00000104257 132 ntBASIC2.31□□□□□ -2.04
Lsm6P62313 Gm15125-201ENSMUST00000116185 800 ntBASIC2.31□□□□□ -2.04
Lsm6P62313 Gm13541-201ENSMUST00000119519 283 ntBASIC2.31□□□□□ -2.04
Lsm6P62313 Gm9440-201ENSMUST00000119667 539 ntBASIC2.31□□□□□ -2.04
Lsm6P62313 Gm26411-201ENSMUST00000157668 107 ntBASIC2.31□□□□□ -2.04
Lsm6P62313 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC2.31□□□□□ -2.04
Lsm6P62313 Gm8161-201ENSMUST00000168739 481 ntBASIC2.31□□□□□ -2.04
Lsm6P62313 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.31□□□□□ -2.04
Lsm6P62313 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Lsm6P62313 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC2.31□□□□□ -2.04
Lsm6P62313 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Lsm6P62313 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Lsm6P62313 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Lsm6P62313 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Lsm6P62313 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Lsm6P62313 Gm20811-201ENSMUST00000190500 553 ntBASIC2.31□□□□□ -2.04
Lsm6P62313 Gm19066-201ENSMUST00000193232 1078 ntBASIC2.31□□□□□ -2.04
Lsm6P62313 Gm9632-201ENSMUST00000195934 643 ntBASIC2.31□□□□□ -2.04
Lsm6P62313 Gm23128-202ENSMUST00000196578 133 ntBASIC2.31□□□□□ -2.04
Lsm6P62313 Gm44903-201ENSMUST00000206840 130 ntBASIC2.31□□□□□ -2.04
Lsm6P62313 Gm45522-201ENSMUST00000210784 166 ntBASIC2.31□□□□□ -2.04
Lsm6P62313 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC2.31□□□□□ -2.04
Lsm6P62313 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.31□□□□□ -2.04
Lsm6P62313 AC115289.1-201ENSMUST00000224915 522 ntBASIC2.31□□□□□ -2.04
Lsm6P62313 AC113031.2-201ENSMUST00000226132 579 ntBASIC2.31□□□□□ -2.04
Lsm6P62313 AC158395.1-201ENSMUST00000227206 452 ntBASIC2.31□□□□□ -2.04
Lsm6P62313 CT030704.1-201ENSMUST00000227521 699 ntBASIC2.31□□□□□ -2.04
Lsm6P62313 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Lsm6P62313 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC2.31□□□□□ -2.04
Lsm6P62313 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Lsm6P62313 Mir128-1-201ENSMUST00000083586 70 ntBASIC2.31□□□□□ -2.04
Lsm6P62313 Gm23846-201ENSMUST00000083835 107 ntBASIC2.31□□□□□ -2.04
Lsm6P62313 Olfr1160-201ENSMUST00000099839 960 ntBASIC2.31□□□□□ -2.04
Lsm6P62313 AC124746.1-201ENSMUST00000227535 1300 ntBASIC2.31□□□□□ -2.04
Lsm6P62313 Gm43889-201ENSMUST00000203950 3681 ntBASIC2.31□□□□□ -2.04
Lsm6P62313 Gm14910-201ENSMUST00000121037 1805 ntBASIC2.31□□□□□ -2.04
Lsm6P62313 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms