Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
Msh6P54276 Mir6363-201ENSMUST00000184880 114 ntBASIC3.12□□□□□ -1.91
Msh6P54276 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Msh6P54276 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Msh6P54276 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC3.12□□□□□ -1.91
Msh6P54276 Gm9375-201ENSMUST00000208899 903 ntBASIC3.12□□□□□ -1.91
Msh6P54276 AC158392.1-201ENSMUST00000223720 1069 ntBASIC3.12□□□□□ -1.91
Msh6P54276 CT025525.3-201ENSMUST00000228858 366 ntBASIC3.12□□□□□ -1.91
Msh6P54276 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Msh6P54276 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Msh6P54276 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
Msh6P54276 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.12□□□□□ -1.91
Msh6P54276 Gm14429-201ENSMUST00000121881 2024 ntBASIC3.12□□□□□ -1.91
Msh6P54276 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.12□□□□□ -1.91
Msh6P54276 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC3.12□□□□□ -1.91
Msh6P54276 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Msh6P54276 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Msh6P54276 Gm12871-201ENSMUST00000118758 438 ntBASIC3.12□□□□□ -1.91
Msh6P54276 Gm14982-201ENSMUST00000121102 442 ntBASIC3.12□□□□□ -1.91
Msh6P54276 Gm15530-201ENSMUST00000122206 555 ntBASIC3.12□□□□□ -1.91
Msh6P54276 Gm17030-201ENSMUST00000167016 393 ntBASIC3.12□□□□□ -1.91
Msh6P54276 Gm18660-201ENSMUST00000199542 629 ntBASIC3.12□□□□□ -1.91
Msh6P54276 Gm43239-201ENSMUST00000200131 201 ntBASIC3.12□□□□□ -1.91
Msh6P54276 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC3.12□□□□□ -1.91
Msh6P54276 Gm18423-201ENSMUST00000205144 1074 ntBASIC3.12□□□□□ -1.91
Msh6P54276 Gm17838-201ENSMUST00000205872 876 ntBASIC3.12□□□□□ -1.91
Msh6P54276 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC3.12□□□□□ -1.91
Msh6P54276 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
Msh6P54276 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Msh6P54276 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Msh6P54276 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC3.11□□□□□ -1.91
Msh6P54276 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Msh6P54276 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Msh6P54276 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Msh6P54276 Gm6215-201ENSMUST00000119297 1386 ntBASIC3.11□□□□□ -1.91
Msh6P54276 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC3.11□□□□□ -1.91
Msh6P54276 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Msh6P54276 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC3.11□□□□□ -1.91
Msh6P54276 Gm12782-201ENSMUST00000117519 727 ntBASIC3.11□□□□□ -1.91
Msh6P54276 Gm14159-201ENSMUST00000119832 451 ntBASIC3.11□□□□□ -1.91
Msh6P54276 Gm23958-201ENSMUST00000157207 105 ntBASIC3.11□□□□□ -1.91
Msh6P54276 Gm24212-201ENSMUST00000158258 132 ntBASIC3.11□□□□□ -1.91
Msh6P54276 Gm16232-201ENSMUST00000162856 167 ntBASIC3.11□□□□□ -1.91
Msh6P54276 Gm17072-201ENSMUST00000166673 658 ntBASIC3.11□□□□□ -1.91
Msh6P54276 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
Msh6P54276 Gm22264-201ENSMUST00000178200 107 ntBASIC3.11□□□□□ -1.91
Msh6P54276 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Msh6P54276 Gm29523-201ENSMUST00000191415 699 ntBASIC3.11□□□□□ -1.91
Msh6P54276 Gm19253-201ENSMUST00000204279 307 ntBASIC3.11□□□□□ -1.91
Msh6P54276 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC3.11□□□□□ -1.91
Msh6P54276 Gm8031-201ENSMUST00000213430 626 ntBASIC3.11□□□□□ -1.91
Msh6P54276 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
Msh6P54276 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Msh6P54276 AC144819.1-201ENSMUST00000227015 620 ntBASIC3.11□□□□□ -1.91
Msh6P54276 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Msh6P54276 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Msh6P54276 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Msh6P54276 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
Msh6P54276 Gm38255-201ENSMUST00000194910 2996 ntBASIC3.1□□□□□ -1.91
Msh6P54276 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC3.1□□□□□ -1.91
Msh6P54276 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Msh6P54276 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Msh6P54276 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
Msh6P54276 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC3.1□□□□□ -1.91
Msh6P54276 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC3.1□□□□□ -1.91
Msh6P54276 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC3.1□□□□□ -1.91
Msh6P54276 Gm23230-201ENSMUST00000157298 133 ntBASIC3.1□□□□□ -1.91
Msh6P54276 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
Msh6P54276 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
Msh6P54276 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Msh6P54276 Gm20773-201ENSMUST00000178940 681 ntBASIC3.1□□□□□ -1.91
Msh6P54276 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Msh6P54276 Gm28788-201ENSMUST00000189717 375 ntBASIC3.1□□□□□ -1.91
Msh6P54276 Gm29558-201ENSMUST00000190134 375 ntBASIC3.1□□□□□ -1.91
Msh6P54276 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC3.1□□□□□ -1.91
Msh6P54276 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC3.1□□□□□ -1.91
Msh6P54276 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC3.1□□□□□ -1.91
Msh6P54276 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC3.1□□□□□ -1.91
Msh6P54276 Gm8249-201ENSMUST00000219225 465 ntBASIC3.1□□□□□ -1.91
Msh6P54276 Gm18704-201ENSMUST00000219736 446 ntBASIC3.1□□□□□ -1.91
Msh6P54276 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
Msh6P54276 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Msh6P54276 Gm23377-201ENSMUST00000082943 126 ntBASIC3.1□□□□□ -1.91
Msh6P54276 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Msh6P54276 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.09□□□□□ -1.91
Msh6P54276 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Msh6P54276 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC3.09□□□□□ -1.92
Msh6P54276 Gm15074-201ENSMUST00000117603 936 ntBASIC3.09□□□□□ -1.92
Msh6P54276 Gm11253-201ENSMUST00000118486 201 ntBASIC3.09□□□□□ -1.92
Msh6P54276 Gm12587-201ENSMUST00000120180 427 ntBASIC3.09□□□□□ -1.92
Msh6P54276 Gm12956-201ENSMUST00000122184 414 ntBASIC3.09□□□□□ -1.92
Msh6P54276 Gm25555-201ENSMUST00000158078 111 ntBASIC3.09□□□□□ -1.92
Msh6P54276 Ear-ps7-201ENSMUST00000161287 442 ntBASIC3.09□□□□□ -1.92
Msh6P54276 Gm22858-201ENSMUST00000174972 76 ntBASIC3.09□□□□□ -1.92
Msh6P54276 Gm36974-201ENSMUST00000194200 1071 ntBASIC3.09□□□□□ -1.92
Msh6P54276 Gm43804-201ENSMUST00000198280 456 ntBASIC3.09□□□□□ -1.92
Msh6P54276 Gm43967-201ENSMUST00000203787 301 ntBASIC3.09□□□□□ -1.92
Msh6P54276 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC3.09□□□□□ -1.92
Msh6P54276 Gm45105-201ENSMUST00000207824 397 ntBASIC3.09□□□□□ -1.92
Msh6P54276 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms