Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm22398-201ENSMUST00000174941 125 ntBASIC4.34□□□□□ -1.71
Shmt1P50431 Gm25731-201ENSMUST00000175167 125 ntBASIC4.34□□□□□ -1.71
Shmt1P50431 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Shmt1P50431 Gm21991-201ENSMUST00000180006 508 ntBASIC4.34□□□□□ -1.71
Shmt1P50431 Gm19774-201ENSMUST00000190667 114 ntBASIC4.34□□□□□ -1.71
Shmt1P50431 Gm32447-201ENSMUST00000194265 697 ntBASIC4.34□□□□□ -1.71
Shmt1P50431 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Shmt1P50431 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC4.34□□□□□ -1.71
Shmt1P50431 Gm8249-201ENSMUST00000219225 465 ntBASIC4.34□□□□□ -1.71
Shmt1P50431 CT030242.2-201ENSMUST00000221588 148 ntBASIC4.34□□□□□ -1.71
Shmt1P50431 Gm5955-201ENSMUST00000222712 219 ntBASIC4.34□□□□□ -1.71
Shmt1P50431 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC4.34□□□□□ -1.71
Shmt1P50431 Gm23679-201ENSMUST00000083161 119 ntBASIC4.34□□□□□ -1.71
Shmt1P50431 AC160115.1-201ENSMUST00000224678 1574 ntBASIC4.34□□□□□ -1.71
Shmt1P50431 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Shmt1P50431 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
Shmt1P50431 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Shmt1P50431 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Shmt1P50431 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Shmt1P50431 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Shmt1P50431 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Shmt1P50431 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC4.33□□□□□ -1.72
Shmt1P50431 Gm23319-201ENSMUST00000104467 131 ntBASIC4.33□□□□□ -1.72
Shmt1P50431 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC4.33□□□□□ -1.72
Shmt1P50431 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC4.33□□□□□ -1.72
Shmt1P50431 Gm22791-201ENSMUST00000157232 145 ntBASIC4.33□□□□□ -1.72
Shmt1P50431 Gm22085-201ENSMUST00000158344 110 ntBASIC4.33□□□□□ -1.72
Shmt1P50431 Gm25520-201ENSMUST00000158389 118 ntBASIC4.33□□□□□ -1.72
Shmt1P50431 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC4.33□□□□□ -1.72
Shmt1P50431 Gm8816-201ENSMUST00000182280 1163 ntBASIC4.33□□□□□ -1.72
Shmt1P50431 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Shmt1P50431 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC4.33□□□□□ -1.72
Shmt1P50431 Gm5552-201ENSMUST00000197149 515 ntBASIC4.33□□□□□ -1.72
Shmt1P50431 Gm42451-201ENSMUST00000197410 244 ntBASIC4.33□□□□□ -1.72
Shmt1P50431 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC4.33□□□□□ -1.72
Shmt1P50431 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC4.33□□□□□ -1.72
Shmt1P50431 Gm5322-201ENSMUST00000206142 699 ntBASIC4.33□□□□□ -1.72
Shmt1P50431 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC4.33□□□□□ -1.72
Shmt1P50431 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC4.33□□□□□ -1.72
Shmt1P50431 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Shmt1P50431 Gm29774-201ENSMUST00000219270 436 ntBASIC4.33□□□□□ -1.72
Shmt1P50431 AC166358.7-201ENSMUST00000221132 108 ntBASIC4.33□□□□□ -1.72
Shmt1P50431 AC125543.5-201ENSMUST00000222799 108 ntBASIC4.33□□□□□ -1.72
Shmt1P50431 AC147633.1-201ENSMUST00000225134 259 ntBASIC4.33□□□□□ -1.72
Shmt1P50431 Snord42a-201ENSMUST00000082606 65 ntBASIC4.33□□□□□ -1.72
Shmt1P50431 Mir215-201ENSMUST00000083628 112 ntBASIC4.33□□□□□ -1.72
Shmt1P50431 Gm24764-201ENSMUST00000083686 199 ntBASIC4.33□□□□□ -1.72
Shmt1P50431 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC4.33□□□□□ -1.72
Shmt1P50431 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Shmt1P50431 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Shmt1P50431 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
Shmt1P50431 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
Shmt1P50431 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Shmt1P50431 Svet1-201ENSMUST00000209370 3940 ntBASIC4.33□□□□□ -1.72
Shmt1P50431 AC154548.1-201ENSMUST00000225844 3838 ntBASIC4.33□□□□□ -1.72
Shmt1P50431 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC4.33□□□□□ -1.72
Shmt1P50431 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
Shmt1P50431 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
Shmt1P50431 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Shmt1P50431 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Shmt1P50431 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Shmt1P50431 Gm25420-201ENSMUST00000104216 127 ntBASIC4.32□□□□□ -1.72
Shmt1P50431 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Shmt1P50431 Gm12739-201ENSMUST00000119769 382 ntBASIC4.32□□□□□ -1.72
Shmt1P50431 Gm12876-201ENSMUST00000120975 408 ntBASIC4.32□□□□□ -1.72
Shmt1P50431 Gm14761-201ENSMUST00000121363 262 ntBASIC4.32□□□□□ -1.72
Shmt1P50431 Gm25106-201ENSMUST00000122672 134 ntBASIC4.32□□□□□ -1.72
Shmt1P50431 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC4.32□□□□□ -1.72
Shmt1P50431 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Shmt1P50431 Gm25555-201ENSMUST00000158078 111 ntBASIC4.32□□□□□ -1.72
Shmt1P50431 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC4.32□□□□□ -1.72
Shmt1P50431 Gm22290-201ENSMUST00000177655 107 ntBASIC4.32□□□□□ -1.72
Shmt1P50431 Gm22583-201ENSMUST00000178031 107 ntBASIC4.32□□□□□ -1.72
Shmt1P50431 Gm25671-201ENSMUST00000178612 105 ntBASIC4.32□□□□□ -1.72
Shmt1P50431 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Shmt1P50431 Gm23307-201ENSMUST00000179167 105 ntBASIC4.32□□□□□ -1.72
Shmt1P50431 Gm25286-201ENSMUST00000179790 105 ntBASIC4.32□□□□□ -1.72
Shmt1P50431 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC4.32□□□□□ -1.72
Shmt1P50431 Gm8296-201ENSMUST00000185597 524 ntBASIC4.32□□□□□ -1.72
Shmt1P50431 Gm29610-201ENSMUST00000187749 453 ntBASIC4.32□□□□□ -1.72
Shmt1P50431 Gm19641-201ENSMUST00000188432 417 ntBASIC4.32□□□□□ -1.72
Shmt1P50431 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Shmt1P50431 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC4.32□□□□□ -1.72
Shmt1P50431 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC4.32□□□□□ -1.72
Shmt1P50431 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC4.32□□□□□ -1.72
Shmt1P50431 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Shmt1P50431 AC166341.3-201ENSMUST00000221861 114 ntBASIC4.32□□□□□ -1.72
Shmt1P50431 AC154521.1-201ENSMUST00000222635 330 ntBASIC4.32□□□□□ -1.72
Shmt1P50431 CT485612.2-201ENSMUST00000223014 151 ntBASIC4.32□□□□□ -1.72
Shmt1P50431 AC154640.2-201ENSMUST00000226324 472 ntBASIC4.32□□□□□ -1.72
Shmt1P50431 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Shmt1P50431 Gm26228-201ENSMUST00000082512 107 ntBASIC4.32□□□□□ -1.72
Shmt1P50431 Gm25080-201ENSMUST00000082526 107 ntBASIC4.32□□□□□ -1.72
Shmt1P50431 Gm25592-201ENSMUST00000082635 131 ntBASIC4.32□□□□□ -1.72
Shmt1P50431 Gm25518-201ENSMUST00000083864 107 ntBASIC4.32□□□□□ -1.72
Shmt1P50431 Mir504-201ENSMUST00000093602 79 ntBASIC4.32□□□□□ -1.72
Shmt1P50431 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Shmt1P50431 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Shmt1P50431 Gm29325-201ENSMUST00000190705 2528 ntBASIC4.32□□□□□ -1.72
Shmt1P50431 Gm43882-201ENSMUST00000204871 2264 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms