Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Rfx1P48377 Gm32444-201ENSMUST00000195147 3511 ntBASIC5.41□□□□□ -1.54
Rfx1P48377 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Rfx1P48377 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC5.41□□□□□ -1.54
Rfx1P48377 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC5.41□□□□□ -1.54
Rfx1P48377 Gm28362-201ENSMUST00000189430 2420 ntBASIC5.4□□□□□ -1.54
Rfx1P48377 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
Rfx1P48377 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC5.4□□□□□ -1.54
Rfx1P48377 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Rfx1P48377 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Rfx1P48377 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Rfx1P48377 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
Rfx1P48377 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Rfx1P48377 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Rfx1P48377 Gm24124-201ENSMUST00000104103 132 ntBASIC5.4□□□□□ -1.54
Rfx1P48377 Mir743b-201ENSMUST00000104751 77 ntBASIC5.4□□□□□ -1.54
Rfx1P48377 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC5.4□□□□□ -1.54
Rfx1P48377 Gm14537-201ENSMUST00000117464 599 ntBASIC5.4□□□□□ -1.54
Rfx1P48377 Gm12261-201ENSMUST00000117499 645 ntBASIC5.4□□□□□ -1.54
Rfx1P48377 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC5.4□□□□□ -1.54
Rfx1P48377 Gm12191-201ENSMUST00000118307 348 ntBASIC5.4□□□□□ -1.54
Rfx1P48377 Gm13887-201ENSMUST00000119009 344 ntBASIC5.4□□□□□ -1.54
Rfx1P48377 Gm9703-201ENSMUST00000119573 343 ntBASIC5.4□□□□□ -1.54
Rfx1P48377 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC5.4□□□□□ -1.54
Rfx1P48377 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC5.4□□□□□ -1.54
Rfx1P48377 Gm22073-201ENSMUST00000122668 189 ntBASIC5.4□□□□□ -1.54
Rfx1P48377 Gm24534-201ENSMUST00000157949 291 ntBASIC5.4□□□□□ -1.54
Rfx1P48377 Gm22435-201ENSMUST00000158552 128 ntBASIC5.4□□□□□ -1.54
Rfx1P48377 Gm22257-201ENSMUST00000158687 301 ntBASIC5.4□□□□□ -1.54
Rfx1P48377 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Rfx1P48377 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Rfx1P48377 Mir5624-201ENSMUST00000176635 61 ntBASIC5.4□□□□□ -1.54
Rfx1P48377 Gm28339-201ENSMUST00000185845 696 ntBASIC5.4□□□□□ -1.54
Rfx1P48377 Gm28471-201ENSMUST00000185994 615 ntBASIC5.4□□□□□ -1.54
Rfx1P48377 Gm28598-201ENSMUST00000186490 615 ntBASIC5.4□□□□□ -1.54
Rfx1P48377 Gm28057-201ENSMUST00000186603 615 ntBASIC5.4□□□□□ -1.54
Rfx1P48377 Gm28896-201ENSMUST00000188609 696 ntBASIC5.4□□□□□ -1.54
Rfx1P48377 Gm29268-201ENSMUST00000188669 615 ntBASIC5.4□□□□□ -1.54
Rfx1P48377 Gm28978-201ENSMUST00000191120 615 ntBASIC5.4□□□□□ -1.54
Rfx1P48377 Gm37172-201ENSMUST00000191926 615 ntBASIC5.4□□□□□ -1.54
Rfx1P48377 Gm7182-201ENSMUST00000193351 732 ntBASIC5.4□□□□□ -1.54
Rfx1P48377 Gm37636-201ENSMUST00000193583 359 ntBASIC5.4□□□□□ -1.54
Rfx1P48377 Gm38107-201ENSMUST00000194873 696 ntBASIC5.4□□□□□ -1.54
Rfx1P48377 Gm19726-201ENSMUST00000205008 240 ntBASIC5.4□□□□□ -1.54
Rfx1P48377 AC152979.3-201ENSMUST00000217720 479 ntBASIC5.4□□□□□ -1.54
Rfx1P48377 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC5.4□□□□□ -1.54
Rfx1P48377 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC5.4□□□□□ -1.54
Rfx1P48377 Mir133b-201ENSMUST00000083546 119 ntBASIC5.4□□□□□ -1.54
Rfx1P48377 Gm10343-201ENSMUST00000096279 348 ntBASIC5.4□□□□□ -1.54
Rfx1P48377 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
Rfx1P48377 Gm37848-201ENSMUST00000195288 3103 ntBASIC5.4□□□□□ -1.55
Rfx1P48377 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
Rfx1P48377 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
Rfx1P48377 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
Rfx1P48377 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Rfx1P48377 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Rfx1P48377 Gm14806-201ENSMUST00000116606 2110 ntBASIC5.39□□□□□ -1.55
Rfx1P48377 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Rfx1P48377 Gm23709-201ENSMUST00000104364 130 ntBASIC5.39□□□□□ -1.55
Rfx1P48377 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Rfx1P48377 Gm6584-201ENSMUST00000119671 447 ntBASIC5.39□□□□□ -1.55
Rfx1P48377 Gm12808-201ENSMUST00000120597 404 ntBASIC5.39□□□□□ -1.55
Rfx1P48377 Gm5379-201ENSMUST00000120973 826 ntBASIC5.39□□□□□ -1.55
Rfx1P48377 Gm12779-201ENSMUST00000121496 143 ntBASIC5.39□□□□□ -1.55
Rfx1P48377 Gm25806-201ENSMUST00000122782 122 ntBASIC5.39□□□□□ -1.55
Rfx1P48377 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC5.39□□□□□ -1.55
Rfx1P48377 Gm22968-201ENSMUST00000157955 118 ntBASIC5.39□□□□□ -1.55
Rfx1P48377 Mir3080-201ENSMUST00000175010 79 ntBASIC5.39□□□□□ -1.55
Rfx1P48377 Gm24819-201ENSMUST00000175094 166 ntBASIC5.39□□□□□ -1.55
Rfx1P48377 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Rfx1P48377 Gm25360-201ENSMUST00000178786 191 ntBASIC5.39□□□□□ -1.55
Rfx1P48377 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Rfx1P48377 Mir7028-201ENSMUST00000185016 64 ntBASIC5.39□□□□□ -1.55
Rfx1P48377 Gm28830-201ENSMUST00000188192 213 ntBASIC5.39□□□□□ -1.55
Rfx1P48377 Gm29097-201ENSMUST00000190273 422 ntBASIC5.39□□□□□ -1.55
Rfx1P48377 Gm42830-201ENSMUST00000196642 313 ntBASIC5.39□□□□□ -1.55
Rfx1P48377 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC5.39□□□□□ -1.55
Rfx1P48377 Gm44389-201ENSMUST00000203795 182 ntBASIC5.39□□□□□ -1.55
Rfx1P48377 Gm18007-201ENSMUST00000205019 844 ntBASIC5.39□□□□□ -1.55
Rfx1P48377 Gm2829-201ENSMUST00000213121 499 ntBASIC5.39□□□□□ -1.55
Rfx1P48377 Gm19256-201ENSMUST00000218550 231 ntBASIC5.39□□□□□ -1.55
Rfx1P48377 Gm4987-201ENSMUST00000078326 408 ntBASIC5.39□□□□□ -1.55
Rfx1P48377 Mir202-201ENSMUST00000083568 72 ntBASIC5.39□□□□□ -1.55
Rfx1P48377 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Rfx1P48377 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Rfx1P48377 AC131743.1-201ENSMUST00000222138 4024 ntBASIC5.39□□□□□ -1.55
Rfx1P48377 Gm44542-201ENSMUST00000208677 4314 ntBASIC5.39□□□□□ -1.55
Rfx1P48377 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Rfx1P48377 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Rfx1P48377 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Rfx1P48377 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Rfx1P48377 Gm12571-201ENSMUST00000118132 243 ntBASIC5.38□□□□□ -1.55
Rfx1P48377 Gm8145-201ENSMUST00000118220 745 ntBASIC5.38□□□□□ -1.55
Rfx1P48377 Gm11785-201ENSMUST00000120165 601 ntBASIC5.38□□□□□ -1.55
Rfx1P48377 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC5.38□□□□□ -1.55
Rfx1P48377 Gm23546-201ENSMUST00000158211 137 ntBASIC5.38□□□□□ -1.55
Rfx1P48377 Gm37601-201ENSMUST00000194922 394 ntBASIC5.38□□□□□ -1.55
Rfx1P48377 Gm44324-201ENSMUST00000198517 135 ntBASIC5.38□□□□□ -1.55
Rfx1P48377 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC5.38□□□□□ -1.55
Rfx1P48377 AC164567.4-201ENSMUST00000219708 483 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 104.2 ms