Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Cdx2P43241 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC2.4□□□□□ -2.03
Cdx2P43241 Gm37788-201ENSMUST00000193958 2705 ntBASIC2.4□□□□□ -2.03
Cdx2P43241 Gm43718-201ENSMUST00000197524 1857 ntBASIC2.39□□□□□ -2.03
Cdx2P43241 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
Cdx2P43241 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Cdx2P43241 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC2.39□□□□□ -2.03
Cdx2P43241 Mir294-201ENSMUST00000104710 84 ntBASIC2.39□□□□□ -2.03
Cdx2P43241 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC2.39□□□□□ -2.03
Cdx2P43241 Gm14125-201ENSMUST00000113442 680 ntBASIC2.39□□□□□ -2.03
Cdx2P43241 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.39□□□□□ -2.03
Cdx2P43241 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC2.39□□□□□ -2.03
Cdx2P43241 Gm22257-201ENSMUST00000158687 301 ntBASIC2.39□□□□□ -2.03
Cdx2P43241 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Cdx2P43241 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.39□□□□□ -2.03
Cdx2P43241 Gm26915-201ENSMUST00000183080 748 ntBASIC2.39□□□□□ -2.03
Cdx2P43241 Gm29553-201ENSMUST00000189692 279 ntBASIC2.39□□□□□ -2.03
Cdx2P43241 Gm28552-201ENSMUST00000190725 388 ntBASIC2.39□□□□□ -2.03
Cdx2P43241 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC2.39□□□□□ -2.03
Cdx2P43241 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
Cdx2P43241 Igkv15-97-201ENSMUST00000197637 339 ntBASIC2.39□□□□□ -2.03
Cdx2P43241 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC2.39□□□□□ -2.03
Cdx2P43241 Gm17893-201ENSMUST00000203017 770 ntBASIC2.39□□□□□ -2.03
Cdx2P43241 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.39□□□□□ -2.03
Cdx2P43241 AC152979.1-201ENSMUST00000218214 289 ntBASIC2.39□□□□□ -2.03
Cdx2P43241 Gm18617-201ENSMUST00000222311 259 ntBASIC2.39□□□□□ -2.03
Cdx2P43241 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.39□□□□□ -2.03
Cdx2P43241 AC117202.3-201ENSMUST00000228532 310 ntBASIC2.39□□□□□ -2.03
Cdx2P43241 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Cdx2P43241 Gm25130-201ENSMUST00000082650 156 ntBASIC2.39□□□□□ -2.03
Cdx2P43241 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Cdx2P43241 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
Cdx2P43241 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.38□□□□□ -2.03
Cdx2P43241 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Cdx2P43241 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Cdx2P43241 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC2.38□□□□□ -2.03
Cdx2P43241 Gm13329-201ENSMUST00000117063 265 ntBASIC2.38□□□□□ -2.03
Cdx2P43241 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC2.38□□□□□ -2.03
Cdx2P43241 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Cdx2P43241 Gm14159-201ENSMUST00000119832 451 ntBASIC2.38□□□□□ -2.03
Cdx2P43241 Gm11363-201ENSMUST00000121672 548 ntBASIC2.38□□□□□ -2.03
Cdx2P43241 Gm13487-201ENSMUST00000122240 864 ntBASIC2.38□□□□□ -2.03
Cdx2P43241 Gm14903-201ENSMUST00000122435 537 ntBASIC2.38□□□□□ -2.03
Cdx2P43241 Gm22766-201ENSMUST00000158372 99 ntBASIC2.38□□□□□ -2.03
Cdx2P43241 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC2.38□□□□□ -2.03
Cdx2P43241 Gm22264-201ENSMUST00000178200 107 ntBASIC2.38□□□□□ -2.03
Cdx2P43241 Gm27233-201ENSMUST00000184030 307 ntBASIC2.38□□□□□ -2.03
Cdx2P43241 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC2.38□□□□□ -2.03
Cdx2P43241 Gm19498-201ENSMUST00000191128 331 ntBASIC2.38□□□□□ -2.03
Cdx2P43241 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC2.38□□□□□ -2.03
Cdx2P43241 Gm42818-201ENSMUST00000198869 987 ntBASIC2.38□□□□□ -2.03
Cdx2P43241 Gm6615-201ENSMUST00000199426 631 ntBASIC2.38□□□□□ -2.03
Cdx2P43241 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.38□□□□□ -2.03
Cdx2P43241 Gm44030-201ENSMUST00000204865 432 ntBASIC2.38□□□□□ -2.03
Cdx2P43241 Gm8679-201ENSMUST00000210651 1036 ntBASIC2.38□□□□□ -2.03
Cdx2P43241 Gm18871-201ENSMUST00000218655 745 ntBASIC2.38□□□□□ -2.03
Cdx2P43241 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
Cdx2P43241 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Cdx2P43241 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Cdx2P43241 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Cdx2P43241 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
Cdx2P43241 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Cdx2P43241 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Cdx2P43241 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Cdx2P43241 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Cdx2P43241 Gm22486-201ENSMUST00000116815 137 ntBASIC2.37□□□□□ -2.03
Cdx2P43241 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC2.37□□□□□ -2.03
Cdx2P43241 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
Cdx2P43241 Gm14841-201ENSMUST00000121067 758 ntBASIC2.37□□□□□ -2.03
Cdx2P43241 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2.37□□□□□ -2.03
Cdx2P43241 Gm22099-201ENSMUST00000157925 123 ntBASIC2.37□□□□□ -2.03
Cdx2P43241 Gm24771-201ENSMUST00000158508 137 ntBASIC2.37□□□□□ -2.03
Cdx2P43241 Gm16147-201ENSMUST00000162143 373 ntBASIC2.37□□□□□ -2.03
Cdx2P43241 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC2.37□□□□□ -2.03
Cdx2P43241 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Cdx2P43241 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC2.37□□□□□ -2.03
Cdx2P43241 Gm25470-201ENSMUST00000175576 111 ntBASIC2.37□□□□□ -2.03
Cdx2P43241 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
Cdx2P43241 Gm28788-201ENSMUST00000189717 375 ntBASIC2.37□□□□□ -2.03
Cdx2P43241 Gm29558-201ENSMUST00000190134 375 ntBASIC2.37□□□□□ -2.03
Cdx2P43241 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC2.37□□□□□ -2.03
Cdx2P43241 Gm45678-201ENSMUST00000210509 295 ntBASIC2.37□□□□□ -2.03
Cdx2P43241 Gm45588-201ENSMUST00000211213 630 ntBASIC2.37□□□□□ -2.03
Cdx2P43241 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC2.37□□□□□ -2.03
Cdx2P43241 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC2.37□□□□□ -2.03
Cdx2P43241 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC2.37□□□□□ -2.03
Cdx2P43241 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Cdx2P43241 Gm22829-201ENSMUST00000083771 106 ntBASIC2.37□□□□□ -2.03
Cdx2P43241 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
Cdx2P43241 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Cdx2P43241 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Cdx2P43241 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Cdx2P43241 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Cdx2P43241 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Cdx2P43241 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Cdx2P43241 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC2.36□□□□□ -2.03
Cdx2P43241 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Cdx2P43241 Mir344e-201ENSMUST00000104677 66 ntBASIC2.36□□□□□ -2.03
Cdx2P43241 Gm15108-201ENSMUST00000116160 803 ntBASIC2.36□□□□□ -2.03
Cdx2P43241 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms