Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
HttP42859 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
HttP42859 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
HttP42859 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
HttP42859 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
HttP42859 Gm24044-201ENSMUST00000083107 156 ntBASIC2.13□□□□□ -2.07
HttP42859 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
HttP42859 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
HttP42859 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC2.12□□□□□ -2.07
HttP42859 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.12□□□□□ -2.07
HttP42859 Gm6462-201ENSMUST00000081488 304 ntBASIC2.12□□□□□ -2.07
HttP42859 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
HttP42859 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC2.12□□□□□ -2.07
HttP42859 Gm14292-201ENSMUST00000118761 456 ntBASIC2.12□□□□□ -2.07
HttP42859 Gm23223-201ENSMUST00000158119 127 ntBASIC2.12□□□□□ -2.07
HttP42859 Gm29556-201ENSMUST00000187591 696 ntBASIC2.12□□□□□ -2.07
HttP42859 Gm19123-201ENSMUST00000190716 651 ntBASIC2.12□□□□□ -2.07
HttP42859 Gm37543-201ENSMUST00000192443 1031 ntBASIC2.12□□□□□ -2.07
HttP42859 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC2.12□□□□□ -2.07
HttP42859 AL590614.1-201ENSMUST00000226037 268 ntBASIC2.12□□□□□ -2.07
HttP42859 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC2.11□□□□□ -2.07
HttP42859 Gm8989-201ENSMUST00000184782 7275 ntBASIC2.11□□□□□ -2.07
HttP42859 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
HttP42859 Gm13153-201ENSMUST00000120969 637 ntBASIC2.11□□□□□ -2.07
HttP42859 Gm13424-201ENSMUST00000122301 354 ntBASIC2.11□□□□□ -2.07
HttP42859 Gm28923-201ENSMUST00000187755 322 ntBASIC2.11□□□□□ -2.07
HttP42859 Gm37293-201ENSMUST00000191658 295 ntBASIC2.11□□□□□ -2.07
HttP42859 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
HttP42859 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.11□□□□□ -2.07
HttP42859 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
HttP42859 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC2.11□□□□□ -2.07
HttP42859 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC2.11□□□□□ -2.07
HttP42859 Gm12042-201ENSMUST00000120479 301 ntBASIC2.11□□□□□ -2.07
HttP42859 Gm9022-202ENSMUST00000183285 483 ntBASIC2.11□□□□□ -2.07
HttP42859 CR974485.1-201ENSMUST00000222408 402 ntBASIC2.11□□□□□ -2.07
HttP42859 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
HttP42859 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
HttP42859 Mir301b-201ENSMUST00000102333 97 ntBASIC2.1□□□□□ -2.07
HttP42859 Gm26387-201ENSMUST00000104238 132 ntBASIC2.1□□□□□ -2.07
HttP42859 Gm14882-201ENSMUST00000117216 218 ntBASIC2.1□□□□□ -2.07
HttP42859 Gm23957-201ENSMUST00000157209 90 ntBASIC2.1□□□□□ -2.07
HttP42859 Gm24863-201ENSMUST00000179499 107 ntBASIC2.1□□□□□ -2.07
HttP42859 Gm28200-201ENSMUST00000187778 315 ntBASIC2.1□□□□□ -2.07
HttP42859 Gm29378-201ENSMUST00000188723 315 ntBASIC2.1□□□□□ -2.07
HttP42859 Gm28909-201ENSMUST00000189406 315 ntBASIC2.1□□□□□ -2.07
HttP42859 Gm44060-201ENSMUST00000204440 410 ntBASIC2.1□□□□□ -2.07
HttP42859 Gm5358-201ENSMUST00000212814 353 ntBASIC2.1□□□□□ -2.07
HttP42859 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
HttP42859 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
HttP42859 Gm15302-201ENSMUST00000117779 2630 ntBASIC2.1□□□□□ -2.07
HttP42859 Gm27468-201ENSMUST00000183577 106 ntBASIC2.1□□□□□ -2.07
HttP42859 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC2.1□□□□□ -2.07
HttP42859 Gm7751-201ENSMUST00000212868 709 ntBASIC2.1□□□□□ -2.07
HttP42859 AC105407.3-201ENSMUST00000224161 648 ntBASIC2.1□□□□□ -2.07
HttP42859 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.1□□□□□ -2.07
HttP42859 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
HttP42859 Gm22761-201ENSMUST00000102278 96 ntBASIC2.09□□□□□ -2.07
HttP42859 Gm11877-201ENSMUST00000118921 852 ntBASIC2.09□□□□□ -2.07
HttP42859 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
HttP42859 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
HttP42859 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
HttP42859 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
HttP42859 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
HttP42859 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
HttP42859 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.09□□□□□ -2.07
HttP42859 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC2.09□□□□□ -2.08
HttP42859 Mup-ps9-201ENSMUST00000178847 545 ntBASIC2.09□□□□□ -2.08
HttP42859 Gm27330-201ENSMUST00000184689 132 ntBASIC2.09□□□□□ -2.08
HttP42859 Gm17946-201ENSMUST00000186856 538 ntBASIC2.09□□□□□ -2.08
HttP42859 AC122418.1-201ENSMUST00000225012 511 ntBASIC2.09□□□□□ -2.08
HttP42859 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
HttP42859 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
HttP42859 Gm5596-201ENSMUST00000207988 2421 ntBASIC2.09□□□□□ -2.08
HttP42859 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
HttP42859 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
HttP42859 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.08□□□□□ -2.08
HttP42859 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
HttP42859 Gm24769-201ENSMUST00000158506 129 ntBASIC2.08□□□□□ -2.08
HttP42859 Mir7059-201ENSMUST00000184825 59 ntBASIC2.08□□□□□ -2.08
HttP42859 Gm38018-201ENSMUST00000195651 540 ntBASIC2.08□□□□□ -2.08
HttP42859 Gm19761-201ENSMUST00000205372 391 ntBASIC2.08□□□□□ -2.08
HttP42859 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC2.08□□□□□ -2.08
HttP42859 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
HttP42859 Gm16100-201ENSMUST00000120489 231 ntBASIC2.08□□□□□ -2.08
HttP42859 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
HttP42859 Mir3069-201ENSMUST00000198802 65 ntBASIC2.08□□□□□ -2.08
HttP42859 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC2.08□□□□□ -2.08
HttP42859 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC2.08□□□□□ -2.08
HttP42859 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
HttP42859 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
HttP42859 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC2.08□□□□□ -2.08
HttP42859 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC2.08□□□□□ -2.08
HttP42859 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
HttP42859 Gm13532-201ENSMUST00000120373 240 ntBASIC2.07□□□□□ -2.08
HttP42859 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC2.07□□□□□ -2.08
HttP42859 Gm43669-201ENSMUST00000198229 436 ntBASIC2.07□□□□□ -2.08
HttP42859 Gm42990-201ENSMUST00000199231 312 ntBASIC2.07□□□□□ -2.08
HttP42859 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
HttP42859 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
HttP42859 Gm14020-201ENSMUST00000118165 662 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms