Protein–RNA interactions for Protein: P28700

Rxra, Retinoic acid receptor RXR-alpha, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxraP28700 Gm2343-201ENSMUST00000161177 1042 ntBASIC3.8□□□□□ -1.8
RxraP28700 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RxraP28700 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
RxraP28700 Gm27028-201ENSMUST00000182303 399 ntBASIC3.8□□□□□ -1.8
RxraP28700 Mir6907-201ENSMUST00000183764 71 ntBASIC3.8□□□□□ -1.8
RxraP28700 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
RxraP28700 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC3.8□□□□□ -1.8
RxraP28700 Gm37550-201ENSMUST00000193230 463 ntBASIC3.8□□□□□ -1.8
RxraP28700 Gm38088-201ENSMUST00000195829 241 ntBASIC3.8□□□□□ -1.8
RxraP28700 Gm42665-201ENSMUST00000202100 586 ntBASIC3.8□□□□□ -1.8
RxraP28700 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC3.8□□□□□ -1.8
RxraP28700 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC3.8□□□□□ -1.8
RxraP28700 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC3.8□□□□□ -1.8
RxraP28700 Gm46193-201ENSMUST00000219399 364 ntBASIC3.8□□□□□ -1.8
RxraP28700 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC3.8□□□□□ -1.8
RxraP28700 CT010506.2-201ENSMUST00000225618 183 ntBASIC3.8□□□□□ -1.8
RxraP28700 Gm22229-201ENSMUST00000082987 108 ntBASIC3.8□□□□□ -1.8
RxraP28700 Gm23097-201ENSMUST00000083448 105 ntBASIC3.8□□□□□ -1.8
RxraP28700 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC3.8□□□□□ -1.8
RxraP28700 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.8□□□□□ -1.8
RxraP28700 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.8□□□□□ -1.8
RxraP28700 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.8□□□□□ -1.8
RxraP28700 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RxraP28700 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
RxraP28700 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
RxraP28700 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
RxraP28700 Gm44925-201ENSMUST00000208879 2110 ntBASIC3.79□□□□□ -1.8
RxraP28700 Gm13567-201ENSMUST00000118026 247 ntBASIC3.79□□□□□ -1.8
RxraP28700 Gm14753-201ENSMUST00000118503 246 ntBASIC3.79□□□□□ -1.8
RxraP28700 Gm14975-201ENSMUST00000118741 664 ntBASIC3.79□□□□□ -1.8
RxraP28700 Gm15030-201ENSMUST00000119804 484 ntBASIC3.79□□□□□ -1.8
RxraP28700 Gm14362-201ENSMUST00000121679 273 ntBASIC3.79□□□□□ -1.8
RxraP28700 Gm26476-201ENSMUST00000122618 313 ntBASIC3.79□□□□□ -1.8
RxraP28700 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RxraP28700 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC3.79□□□□□ -1.8
RxraP28700 Gm15254-201ENSMUST00000149567 273 ntBASIC3.79□□□□□ -1.8
RxraP28700 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC3.79□□□□□ -1.8
RxraP28700 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.79□□□□□ -1.8
RxraP28700 Gm23078-201ENSMUST00000157848 148 ntBASIC3.79□□□□□ -1.8
RxraP28700 Gm25436-201ENSMUST00000158275 145 ntBASIC3.79□□□□□ -1.8
RxraP28700 Gm25999-201ENSMUST00000175398 133 ntBASIC3.79□□□□□ -1.8
RxraP28700 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC3.79□□□□□ -1.8
RxraP28700 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC3.79□□□□□ -1.8
RxraP28700 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC3.79□□□□□ -1.8
RxraP28700 Gm27957-201ENSMUST00000184054 127 ntBASIC3.79□□□□□ -1.8
RxraP28700 Gm27236-201ENSMUST00000184147 442 ntBASIC3.79□□□□□ -1.8
RxraP28700 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.79□□□□□ -1.8
RxraP28700 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC3.79□□□□□ -1.8
RxraP28700 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC3.79□□□□□ -1.8
RxraP28700 Gm7449-201ENSMUST00000194393 663 ntBASIC3.79□□□□□ -1.8
RxraP28700 Igkv2-113-201ENSMUST00000196138 362 ntBASIC3.79□□□□□ -1.8
RxraP28700 Gm43559-201ENSMUST00000198755 466 ntBASIC3.79□□□□□ -1.8
RxraP28700 Gm43604-201ENSMUST00000199799 705 ntBASIC3.79□□□□□ -1.8
RxraP28700 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC3.79□□□□□ -1.8
RxraP28700 Gm45327-201ENSMUST00000211612 565 ntBASIC3.79□□□□□ -1.8
RxraP28700 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RxraP28700 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC3.79□□□□□ -1.8
RxraP28700 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RxraP28700 AC123062.1-201ENSMUST00000221287 481 ntBASIC3.79□□□□□ -1.8
RxraP28700 Gm17890-201ENSMUST00000221419 757 ntBASIC3.79□□□□□ -1.8
RxraP28700 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RxraP28700 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
RxraP28700 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
RxraP28700 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
RxraP28700 Gm44049-201ENSMUST00000204905 2984 ntBASIC3.79□□□□□ -1.8
RxraP28700 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
RxraP28700 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
RxraP28700 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
RxraP28700 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
RxraP28700 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RxraP28700 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RxraP28700 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
RxraP28700 AC158921.1-201ENSMUST00000227861 3468 ntBASIC3.78□□□□□ -1.8
RxraP28700 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RxraP28700 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
RxraP28700 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
RxraP28700 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC3.78□□□□□ -1.8
RxraP28700 Gm14594-201ENSMUST00000118052 537 ntBASIC3.78□□□□□ -1.8
RxraP28700 Gm14590-201ENSMUST00000118934 537 ntBASIC3.78□□□□□ -1.8
RxraP28700 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC3.78□□□□□ -1.8
RxraP28700 Gm24532-201ENSMUST00000157951 286 ntBASIC3.78□□□□□ -1.8
RxraP28700 Gm24976-201ENSMUST00000158972 135 ntBASIC3.78□□□□□ -1.8
RxraP28700 Gm17538-201ENSMUST00000168236 327 ntBASIC3.78□□□□□ -1.8
RxraP28700 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RxraP28700 Gm20542-201ENSMUST00000174582 372 ntBASIC3.78□□□□□ -1.8
RxraP28700 Mir3964-201ENSMUST00000174898 74 ntBASIC3.78□□□□□ -1.8
RxraP28700 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.78□□□□□ -1.8
RxraP28700 Gm4076-201ENSMUST00000179230 965 ntBASIC3.78□□□□□ -1.8
RxraP28700 Gm25156-201ENSMUST00000179809 79 ntBASIC3.78□□□□□ -1.8
RxraP28700 Gm14596-201ENSMUST00000180268 537 ntBASIC3.78□□□□□ -1.8
RxraP28700 Gm14595-201ENSMUST00000180335 537 ntBASIC3.78□□□□□ -1.8
RxraP28700 Nras-ps2-201ENSMUST00000195269 178 ntBASIC3.78□□□□□ -1.8
RxraP28700 Gm18384-201ENSMUST00000195974 808 ntBASIC3.78□□□□□ -1.8
RxraP28700 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RxraP28700 Gm38395-201ENSMUST00000199904 830 ntBASIC3.78□□□□□ -1.8
RxraP28700 Gm44099-201ENSMUST00000203299 112 ntBASIC3.78□□□□□ -1.8
RxraP28700 Gm44609-201ENSMUST00000207157 460 ntBASIC3.78□□□□□ -1.8
RxraP28700 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC3.78□□□□□ -1.8
RxraP28700 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC3.78□□□□□ -1.8
RxraP28700 AC174797.3-202ENSMUST00000224578 587 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 93.5 ms