Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
P20040 Gm37732-201ENSMUST00000194377 316 ntBASIC2.74□□□□□ -1.97
P20040 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC2.74□□□□□ -1.97
P20040 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC2.74□□□□□ -1.97
P20040 Gm44030-201ENSMUST00000204865 432 ntBASIC2.74□□□□□ -1.97
P20040 Gm17838-201ENSMUST00000205872 876 ntBASIC2.74□□□□□ -1.97
P20040 Gm7624-201ENSMUST00000209702 435 ntBASIC2.74□□□□□ -1.97
P20040 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC2.74□□□□□ -1.97
P20040 Gm17911-201ENSMUST00000210806 877 ntBASIC2.74□□□□□ -1.97
P20040 Gm6842-201ENSMUST00000211361 390 ntBASIC2.74□□□□□ -1.97
P20040 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC2.74□□□□□ -1.97
P20040 AC145736.1-201ENSMUST00000214661 479 ntBASIC2.74□□□□□ -1.97
P20040 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
P20040 AC166369.3-201ENSMUST00000227286 409 ntBASIC2.74□□□□□ -1.97
P20040 AC127371.1-202ENSMUST00000228923 306 ntBASIC2.74□□□□□ -1.97
P20040 Gm9845-201ENSMUST00000056409 598 ntBASIC2.74□□□□□ -1.97
P20040 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
P20040 Gm42675-201ENSMUST00000197552 4035 ntBASIC2.74□□□□□ -1.97
P20040 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
P20040 Gm14442-201ENSMUST00000119690 1736 ntBASIC2.73□□□□□ -1.97
P20040 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
P20040 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
P20040 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
P20040 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
P20040 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
P20040 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
P20040 Gm13454-201ENSMUST00000118166 483 ntBASIC2.73□□□□□ -1.97
P20040 Gm15103-201ENSMUST00000119893 871 ntBASIC2.73□□□□□ -1.97
P20040 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC2.73□□□□□ -1.97
P20040 Gm12706-201ENSMUST00000121588 698 ntBASIC2.73□□□□□ -1.97
P20040 Gm22722-201ENSMUST00000157467 132 ntBASIC2.73□□□□□ -1.97
P20040 Gm24213-201ENSMUST00000158255 258 ntBASIC2.73□□□□□ -1.97
P20040 Gm22833-201ENSMUST00000158292 132 ntBASIC2.73□□□□□ -1.97
P20040 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
P20040 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC2.73□□□□□ -1.97
P20040 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC2.73□□□□□ -1.97
P20040 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC2.73□□□□□ -1.97
P20040 Gm27428-201ENSMUST00000184289 110 ntBASIC2.73□□□□□ -1.97
P20040 Gm37578-201ENSMUST00000192256 1177 ntBASIC2.73□□□□□ -1.97
P20040 Gm37213-201ENSMUST00000193077 586 ntBASIC2.73□□□□□ -1.97
P20040 Gm38213-201ENSMUST00000193203 173 ntBASIC2.73□□□□□ -1.97
P20040 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC2.73□□□□□ -1.97
P20040 Crs-ps-201ENSMUST00000203723 760 ntBASIC2.73□□□□□ -1.97
P20040 Gm43932-201ENSMUST00000204499 52 ntBASIC2.73□□□□□ -1.97
P20040 Gm45588-201ENSMUST00000211213 630 ntBASIC2.73□□□□□ -1.97
P20040 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
P20040 Gm46233-201ENSMUST00000217831 449 ntBASIC2.73□□□□□ -1.97
P20040 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC2.73□□□□□ -1.97
P20040 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
P20040 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC2.73□□□□□ -1.97
P20040 AC131743.3-201ENSMUST00000222099 662 ntBASIC2.73□□□□□ -1.97
P20040 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
P20040 AC109172.2-201ENSMUST00000228792 381 ntBASIC2.73□□□□□ -1.97
P20040 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
P20040 Gm25202-201ENSMUST00000082838 191 ntBASIC2.73□□□□□ -1.97
P20040 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
P20040 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
P20040 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
P20040 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
P20040 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
P20040 Gm37515-201ENSMUST00000193321 3817 ntBASIC2.73□□□□□ -1.97
P20040 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
P20040 AC115047.2-201ENSMUST00000214421 1848 ntBASIC2.72□□□□□ -1.97
P20040 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
P20040 Gm7869-201ENSMUST00000121457 1322 ntBASIC2.72□□□□□ -1.97
P20040 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC2.72□□□□□ -1.97
P20040 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
P20040 Gm12782-201ENSMUST00000117519 727 ntBASIC2.72□□□□□ -1.97
P20040 Gm12891-201ENSMUST00000119358 240 ntBASIC2.72□□□□□ -1.97
P20040 Gm14647-201ENSMUST00000119392 680 ntBASIC2.72□□□□□ -1.97
P20040 Gm2005-201ENSMUST00000120759 542 ntBASIC2.72□□□□□ -1.97
P20040 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
P20040 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
P20040 Gm21638-201ENSMUST00000179473 836 ntBASIC2.72□□□□□ -1.97
P20040 Gm27161-201ENSMUST00000183960 562 ntBASIC2.72□□□□□ -1.97
P20040 Gm29259-201ENSMUST00000186396 694 ntBASIC2.72□□□□□ -1.97
P20040 Gm29576-201ENSMUST00000188020 678 ntBASIC2.72□□□□□ -1.97
P20040 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
P20040 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC2.72□□□□□ -1.97
P20040 Gm29330-201ENSMUST00000190032 699 ntBASIC2.72□□□□□ -1.97
P20040 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
P20040 Gm28354-201ENSMUST00000190904 678 ntBASIC2.72□□□□□ -1.97
P20040 Gm28098-201ENSMUST00000191361 699 ntBASIC2.72□□□□□ -1.97
P20040 Gm38216-201ENSMUST00000194872 1214 ntBASIC2.72□□□□□ -1.97
P20040 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC2.72□□□□□ -1.97
P20040 Gm44625-201ENSMUST00000207838 1561 ntBASIC2.72□□□□□ -1.97
P20040 Gm19126-201ENSMUST00000207896 509 ntBASIC2.72□□□□□ -1.97
P20040 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC2.72□□□□□ -1.97
P20040 Gm9712-201ENSMUST00000210842 311 ntBASIC2.72□□□□□ -1.97
P20040 Gm7948-201ENSMUST00000212607 844 ntBASIC2.72□□□□□ -1.97
P20040 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC2.72□□□□□ -1.97
P20040 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC2.72□□□□□ -1.97
P20040 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
P20040 Gm19987-201ENSMUST00000216339 499 ntBASIC2.72□□□□□ -1.97
P20040 AC152979.1-201ENSMUST00000218214 289 ntBASIC2.72□□□□□ -1.97
P20040 AC157017.2-201ENSMUST00000218354 777 ntBASIC2.72□□□□□ -1.97
P20040 AC157570.3-201ENSMUST00000219281 205 ntBASIC2.72□□□□□ -1.97
P20040 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC2.72□□□□□ -1.97
P20040 AC120540.1-201ENSMUST00000221879 324 ntBASIC2.72□□□□□ -1.97
P20040 AC118639.1-201ENSMUST00000227204 338 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 100 ms