Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Msx1P13297 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Msx1P13297 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Msx1P13297 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
Msx1P13297 Gm15752-201ENSMUST00000117427 394 ntBASIC5.15□□□□□ -1.59
Msx1P13297 Gm11550-201ENSMUST00000118210 699 ntBASIC5.15□□□□□ -1.59
Msx1P13297 Gm11975-201ENSMUST00000118772 481 ntBASIC5.15□□□□□ -1.59
Msx1P13297 Gm15313-201ENSMUST00000119179 282 ntBASIC5.15□□□□□ -1.59
Msx1P13297 Gm14472-201ENSMUST00000119815 282 ntBASIC5.15□□□□□ -1.59
Msx1P13297 Defa-ps8-201ENSMUST00000120972 279 ntBASIC5.15□□□□□ -1.59
Msx1P13297 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC5.15□□□□□ -1.59
Msx1P13297 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Msx1P13297 Gm6872-201ENSMUST00000165001 700 ntBASIC5.15□□□□□ -1.59
Msx1P13297 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Msx1P13297 Gm21960-201ENSMUST00000181924 452 ntBASIC5.15□□□□□ -1.59
Msx1P13297 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC5.15□□□□□ -1.59
Msx1P13297 Mir6943-201ENSMUST00000185186 66 ntBASIC5.15□□□□□ -1.59
Msx1P13297 Gm28389-201ENSMUST00000190090 697 ntBASIC5.15□□□□□ -1.59
Msx1P13297 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC5.15□□□□□ -1.59
Msx1P13297 Gm30341-201ENSMUST00000194363 289 ntBASIC5.15□□□□□ -1.59
Msx1P13297 Gm42694-201ENSMUST00000196951 358 ntBASIC5.15□□□□□ -1.59
Msx1P13297 Mir376a-201ENSMUST00000197584 68 ntBASIC5.15□□□□□ -1.59
Msx1P13297 Gm42663-201ENSMUST00000199883 351 ntBASIC5.15□□□□□ -1.59
Msx1P13297 Gm45007-201ENSMUST00000206237 366 ntBASIC5.15□□□□□ -1.59
Msx1P13297 Gm18470-201ENSMUST00000207467 420 ntBASIC5.15□□□□□ -1.59
Msx1P13297 Gm18464-201ENSMUST00000207803 420 ntBASIC5.15□□□□□ -1.59
Msx1P13297 Gm18461-201ENSMUST00000208421 420 ntBASIC5.15□□□□□ -1.59
Msx1P13297 AC105958.2-201ENSMUST00000214167 191 ntBASIC5.15□□□□□ -1.59
Msx1P13297 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Msx1P13297 CT030238.1-201ENSMUST00000228393 442 ntBASIC5.15□□□□□ -1.59
Msx1P13297 Gm25147-201ENSMUST00000083030 105 ntBASIC5.15□□□□□ -1.59
Msx1P13297 Gm25987-201ENSMUST00000083234 107 ntBASIC5.15□□□□□ -1.59
Msx1P13297 Mir449a-201ENSMUST00000083641 91 ntBASIC5.15□□□□□ -1.59
Msx1P13297 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
Msx1P13297 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Msx1P13297 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Msx1P13297 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
Msx1P13297 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Msx1P13297 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC5.15□□□□□ -1.59
Msx1P13297 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Msx1P13297 AC159193.1-201ENSMUST00000222872 2517 ntBASIC5.15□□□□□ -1.59
Msx1P13297 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Msx1P13297 Gm2033-201ENSMUST00000210753 2287 ntBASIC5.14□□□□□ -1.59
Msx1P13297 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Msx1P13297 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
Msx1P13297 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Msx1P13297 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC5.14□□□□□ -1.59
Msx1P13297 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Msx1P13297 AC115289.2-201ENSMUST00000223836 2803 ntBASIC5.14□□□□□ -1.59
Msx1P13297 Gm43359-201ENSMUST00000197944 2200 ntBASIC5.14□□□□□ -1.59
Msx1P13297 Gm24160-201ENSMUST00000104594 126 ntBASIC5.14□□□□□ -1.59
Msx1P13297 Gm11826-201ENSMUST00000118781 438 ntBASIC5.14□□□□□ -1.59
Msx1P13297 Gm15760-201ENSMUST00000119553 283 ntBASIC5.14□□□□□ -1.59
Msx1P13297 Gm11931-201ENSMUST00000121630 447 ntBASIC5.14□□□□□ -1.59
Msx1P13297 Gm23982-201ENSMUST00000157141 106 ntBASIC5.14□□□□□ -1.59
Msx1P13297 Gm23752-201ENSMUST00000157584 115 ntBASIC5.14□□□□□ -1.59
Msx1P13297 Gm23584-201ENSMUST00000157655 129 ntBASIC5.14□□□□□ -1.59
Msx1P13297 Gm23642-201ENSMUST00000157858 258 ntBASIC5.14□□□□□ -1.59
Msx1P13297 Gm25716-201ENSMUST00000158628 104 ntBASIC5.14□□□□□ -1.59
Msx1P13297 Gm17152-201ENSMUST00000172430 535 ntBASIC5.14□□□□□ -1.59
Msx1P13297 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC5.14□□□□□ -1.59
Msx1P13297 Gm29429-201ENSMUST00000187071 121 ntBASIC5.14□□□□□ -1.59
Msx1P13297 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC5.14□□□□□ -1.59
Msx1P13297 Igkv2-113-201ENSMUST00000196138 362 ntBASIC5.14□□□□□ -1.59
Msx1P13297 Gm44092-201ENSMUST00000204470 258 ntBASIC5.14□□□□□ -1.59
Msx1P13297 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC5.14□□□□□ -1.59
Msx1P13297 Gm2607-201ENSMUST00000212389 627 ntBASIC5.14□□□□□ -1.59
Msx1P13297 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Msx1P13297 AC154305.3-201ENSMUST00000224661 552 ntBASIC5.14□□□□□ -1.59
Msx1P13297 AC154335.2-201ENSMUST00000225916 638 ntBASIC5.14□□□□□ -1.59
Msx1P13297 Gm23514-201ENSMUST00000082827 130 ntBASIC5.14□□□□□ -1.59
Msx1P13297 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Msx1P13297 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Msx1P13297 Gm37718-201ENSMUST00000191655 2631 ntBASIC5.14□□□□□ -1.59
Msx1P13297 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Msx1P13297 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Msx1P13297 Gm37101-201ENSMUST00000191656 3660 ntBASIC5.14□□□□□ -1.59
Msx1P13297 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Msx1P13297 Gm44171-201ENSMUST00000203701 2109 ntBASIC5.14□□□□□ -1.59
Msx1P13297 Gm42659-201ENSMUST00000196955 1754 ntBASIC5.14□□□□□ -1.59
Msx1P13297 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Msx1P13297 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC5.14□□□□□ -1.59
Msx1P13297 Gm43437-201ENSMUST00000198535 3955 ntBASIC5.14□□□□□ -1.59
Msx1P13297 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC5.13□□□□□ -1.59
Msx1P13297 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Msx1P13297 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Msx1P13297 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Msx1P13297 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
Msx1P13297 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Msx1P13297 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Msx1P13297 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Msx1P13297 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Msx1P13297 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Msx1P13297 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Msx1P13297 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Msx1P13297 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Msx1P13297 Gm12550-201ENSMUST00000118478 329 ntBASIC5.13□□□□□ -1.59
Msx1P13297 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC5.13□□□□□ -1.59
Msx1P13297 Gm14732-201ENSMUST00000121372 545 ntBASIC5.13□□□□□ -1.59
Msx1P13297 Gm23184-201ENSMUST00000122594 131 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 88.9 ms