Protein–RNA interactions for Protein: P10628

Hoxd4, Homeobox protein Hox-D4, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd4P10628 Gm42681-201ENSMUST00000197999 1611 ntBASIC4.07□□□□□ -1.76
Hoxd4P10628 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
Hoxd4P10628 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Hoxd4P10628 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Hoxd4P10628 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Hoxd4P10628 AC131743.1-201ENSMUST00000222138 4024 ntBASIC4.07□□□□□ -1.76
Hoxd4P10628 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC4.07□□□□□ -1.76
Hoxd4P10628 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Hoxd4P10628 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC4.07□□□□□ -1.76
Hoxd4P10628 Gm12062-201ENSMUST00000117533 259 ntBASIC4.07□□□□□ -1.76
Hoxd4P10628 Gm12571-201ENSMUST00000118132 243 ntBASIC4.07□□□□□ -1.76
Hoxd4P10628 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC4.07□□□□□ -1.76
Hoxd4P10628 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC4.07□□□□□ -1.76
Hoxd4P10628 Gm22718-201ENSMUST00000122701 315 ntBASIC4.07□□□□□ -1.76
Hoxd4P10628 Mir1946a-201ENSMUST00000158360 134 ntBASIC4.07□□□□□ -1.76
Hoxd4P10628 Gm25749-201ENSMUST00000175485 111 ntBASIC4.07□□□□□ -1.76
Hoxd4P10628 Gm20630-201ENSMUST00000177387 551 ntBASIC4.07□□□□□ -1.76
Hoxd4P10628 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC4.07□□□□□ -1.76
Hoxd4P10628 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC4.07□□□□□ -1.76
Hoxd4P10628 Trbv11-201ENSMUST00000194354 260 ntBASIC4.07□□□□□ -1.76
Hoxd4P10628 Igkv2-105-201ENSMUST00000196931 377 ntBASIC4.07□□□□□ -1.76
Hoxd4P10628 Igkv13-64-201ENSMUST00000198143 343 ntBASIC4.07□□□□□ -1.76
Hoxd4P10628 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC4.07□□□□□ -1.76
Hoxd4P10628 Gm45031-201ENSMUST00000206800 288 ntBASIC4.07□□□□□ -1.76
Hoxd4P10628 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC4.07□□□□□ -1.76
Hoxd4P10628 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC4.07□□□□□ -1.76
Hoxd4P10628 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC4.07□□□□□ -1.76
Hoxd4P10628 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Hoxd4P10628 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Hoxd4P10628 Gm24706-201ENSMUST00000082806 137 ntBASIC4.07□□□□□ -1.76
Hoxd4P10628 Gm23460-201ENSMUST00000083258 109 ntBASIC4.07□□□□□ -1.76
Hoxd4P10628 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Hoxd4P10628 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC4.07□□□□□ -1.76
Hoxd4P10628 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Hoxd4P10628 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Hoxd4P10628 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Hoxd4P10628 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Hoxd4P10628 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
Hoxd4P10628 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
Hoxd4P10628 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Hoxd4P10628 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Hoxd4P10628 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Hoxd4P10628 Gm24715-201ENSMUST00000102377 95 ntBASIC4.06□□□□□ -1.76
Hoxd4P10628 Gm22676-201ENSMUST00000116972 129 ntBASIC4.06□□□□□ -1.76
Hoxd4P10628 Gm15377-201ENSMUST00000119594 246 ntBASIC4.06□□□□□ -1.76
Hoxd4P10628 Gm14287-201ENSMUST00000121060 117 ntBASIC4.06□□□□□ -1.76
Hoxd4P10628 Gm14577-201ENSMUST00000121134 256 ntBASIC4.06□□□□□ -1.76
Hoxd4P10628 Gm13009-201ENSMUST00000121307 267 ntBASIC4.06□□□□□ -1.76
Hoxd4P10628 Gm13725-201ENSMUST00000122139 207 ntBASIC4.06□□□□□ -1.76
Hoxd4P10628 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC4.06□□□□□ -1.76
Hoxd4P10628 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC4.06□□□□□ -1.76
Hoxd4P10628 Gm16060-201ENSMUST00000153140 478 ntBASIC4.06□□□□□ -1.76
Hoxd4P10628 Gm26320-201ENSMUST00000157742 306 ntBASIC4.06□□□□□ -1.76
Hoxd4P10628 Gm24689-201ENSMUST00000157760 104 ntBASIC4.06□□□□□ -1.76
Hoxd4P10628 Mir1946b-201ENSMUST00000157853 133 ntBASIC4.06□□□□□ -1.76
Hoxd4P10628 Gm24898-201ENSMUST00000158133 106 ntBASIC4.06□□□□□ -1.76
Hoxd4P10628 Gm16569-201ENSMUST00000160526 314 ntBASIC4.06□□□□□ -1.76
Hoxd4P10628 Gm17152-201ENSMUST00000172430 535 ntBASIC4.06□□□□□ -1.76
Hoxd4P10628 Gm25534-201ENSMUST00000175365 125 ntBASIC4.06□□□□□ -1.76
Hoxd4P10628 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC4.06□□□□□ -1.76
Hoxd4P10628 Gm24100-201ENSMUST00000178592 79 ntBASIC4.06□□□□□ -1.76
Hoxd4P10628 Gm24137-201ENSMUST00000180055 79 ntBASIC4.06□□□□□ -1.76
Hoxd4P10628 Gm24518-201ENSMUST00000180275 94 ntBASIC4.06□□□□□ -1.76
Hoxd4P10628 Gm22391-201ENSMUST00000180356 79 ntBASIC4.06□□□□□ -1.76
Hoxd4P10628 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC4.06□□□□□ -1.76
Hoxd4P10628 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Hoxd4P10628 Gm29062-201ENSMUST00000186032 694 ntBASIC4.06□□□□□ -1.76
Hoxd4P10628 Gm28255-201ENSMUST00000187101 694 ntBASIC4.06□□□□□ -1.76
Hoxd4P10628 Gm29665-201ENSMUST00000191457 528 ntBASIC4.06□□□□□ -1.76
Hoxd4P10628 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC4.06□□□□□ -1.76
Hoxd4P10628 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC4.06□□□□□ -1.76
Hoxd4P10628 AC152979.3-201ENSMUST00000217720 479 ntBASIC4.06□□□□□ -1.76
Hoxd4P10628 AC160031.2-201ENSMUST00000218242 274 ntBASIC4.06□□□□□ -1.76
Hoxd4P10628 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC4.06□□□□□ -1.76
Hoxd4P10628 CT485612.4-201ENSMUST00000223405 250 ntBASIC4.06□□□□□ -1.76
Hoxd4P10628 AC154576.1-201ENSMUST00000225864 563 ntBASIC4.06□□□□□ -1.76
Hoxd4P10628 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Hoxd4P10628 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Hoxd4P10628 Gm26454-201ENSMUST00000082682 107 ntBASIC4.06□□□□□ -1.76
Hoxd4P10628 Gm22571-201ENSMUST00000082984 70 ntBASIC4.06□□□□□ -1.76
Hoxd4P10628 Snord15b-201ENSMUST00000083032 145 ntBASIC4.06□□□□□ -1.76
Hoxd4P10628 Mir27a-201ENSMUST00000083510 87 ntBASIC4.06□□□□□ -1.76
Hoxd4P10628 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC4.06□□□□□ -1.76
Hoxd4P10628 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC4.06□□□□□ -1.76
Hoxd4P10628 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Hoxd4P10628 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Hoxd4P10628 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Hoxd4P10628 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
Hoxd4P10628 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC4.05□□□□□ -1.76
Hoxd4P10628 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC4.05□□□□□ -1.76
Hoxd4P10628 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Hoxd4P10628 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Hoxd4P10628 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
Hoxd4P10628 Gm23322-201ENSMUST00000104464 167 ntBASIC4.05□□□□□ -1.76
Hoxd4P10628 Gm24160-201ENSMUST00000104594 126 ntBASIC4.05□□□□□ -1.76
Hoxd4P10628 Gm23879-201ENSMUST00000116874 126 ntBASIC4.05□□□□□ -1.76
Hoxd4P10628 Gm15560-201ENSMUST00000117107 643 ntBASIC4.05□□□□□ -1.76
Hoxd4P10628 Gm14622-201ENSMUST00000117117 468 ntBASIC4.05□□□□□ -1.76
Hoxd4P10628 Gm11912-201ENSMUST00000117235 264 ntBASIC4.05□□□□□ -1.76
Hoxd4P10628 Gm7327-201ENSMUST00000120925 652 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms