Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm23516-201ENSMUST00000093728 107 ntBASIC3.77□□□□□ -1.81
Col3a1P08121 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC3.77□□□□□ -1.81
Col3a1P08121 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Col3a1P08121 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
Col3a1P08121 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Col3a1P08121 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC3.76□□□□□ -1.81
Col3a1P08121 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
Col3a1P08121 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Col3a1P08121 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Col3a1P08121 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Col3a1P08121 Gm11970-201ENSMUST00000116105 320 ntBASIC3.76□□□□□ -1.81
Col3a1P08121 Gm13743-201ENSMUST00000121486 724 ntBASIC3.76□□□□□ -1.81
Col3a1P08121 Gm15381-201ENSMUST00000121501 1156 ntBASIC3.76□□□□□ -1.81
Col3a1P08121 Gm11229-201ENSMUST00000121993 437 ntBASIC3.76□□□□□ -1.81
Col3a1P08121 Gm16274-201ENSMUST00000139251 592 ntBASIC3.76□□□□□ -1.81
Col3a1P08121 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Col3a1P08121 Gm4222-201ENSMUST00000165784 470 ntBASIC3.76□□□□□ -1.81
Col3a1P08121 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Col3a1P08121 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
Col3a1P08121 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Col3a1P08121 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Col3a1P08121 Gm29602-201ENSMUST00000186887 442 ntBASIC3.76□□□□□ -1.81
Col3a1P08121 Gm8403-201ENSMUST00000189712 1298 ntBASIC3.76□□□□□ -1.81
Col3a1P08121 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.76□□□□□ -1.81
Col3a1P08121 Gm18729-201ENSMUST00000217230 621 ntBASIC3.76□□□□□ -1.81
Col3a1P08121 AC116460.1-201ENSMUST00000219040 313 ntBASIC3.76□□□□□ -1.81
Col3a1P08121 AC116589.1-201ENSMUST00000220634 327 ntBASIC3.76□□□□□ -1.81
Col3a1P08121 Gm18921-201ENSMUST00000221798 366 ntBASIC3.76□□□□□ -1.81
Col3a1P08121 AC192333.2-201ENSMUST00000224771 196 ntBASIC3.76□□□□□ -1.81
Col3a1P08121 AC117202.2-201ENSMUST00000226491 1101 ntBASIC3.76□□□□□ -1.81
Col3a1P08121 AC116656.1-201ENSMUST00000227040 755 ntBASIC3.76□□□□□ -1.81
Col3a1P08121 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Col3a1P08121 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Col3a1P08121 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Col3a1P08121 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Col3a1P08121 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
Col3a1P08121 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
Col3a1P08121 Gm43498-201ENSMUST00000202002 1486 ntBASIC3.76□□□□□ -1.81
Col3a1P08121 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC3.76□□□□□ -1.81
Col3a1P08121 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Col3a1P08121 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Col3a1P08121 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Col3a1P08121 Gm14293-201ENSMUST00000118528 577 ntBASIC3.75□□□□□ -1.81
Col3a1P08121 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Col3a1P08121 Gm13555-201ENSMUST00000121668 319 ntBASIC3.75□□□□□ -1.81
Col3a1P08121 Gm15111-201ENSMUST00000122142 878 ntBASIC3.75□□□□□ -1.81
Col3a1P08121 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Col3a1P08121 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC3.75□□□□□ -1.81
Col3a1P08121 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC3.75□□□□□ -1.81
Col3a1P08121 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC3.75□□□□□ -1.81
Col3a1P08121 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC3.75□□□□□ -1.81
Col3a1P08121 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC3.75□□□□□ -1.81
Col3a1P08121 Gm21959-201ENSMUST00000178439 452 ntBASIC3.75□□□□□ -1.81
Col3a1P08121 Gm9892-201ENSMUST00000182415 992 ntBASIC3.75□□□□□ -1.81
Col3a1P08121 Gm27044-201ENSMUST00000183033 796 ntBASIC3.75□□□□□ -1.81
Col3a1P08121 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC3.75□□□□□ -1.81
Col3a1P08121 Gm28596-201ENSMUST00000185870 696 ntBASIC3.75□□□□□ -1.81
Col3a1P08121 Gm37837-201ENSMUST00000191743 604 ntBASIC3.75□□□□□ -1.81
Col3a1P08121 Gm32295-201ENSMUST00000192558 696 ntBASIC3.75□□□□□ -1.81
Col3a1P08121 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Col3a1P08121 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC3.75□□□□□ -1.81
Col3a1P08121 Ighv3-7-201ENSMUST00000193370 348 ntBASIC3.75□□□□□ -1.81
Col3a1P08121 Gm31260-201ENSMUST00000193478 696 ntBASIC3.75□□□□□ -1.81
Col3a1P08121 Gm36953-201ENSMUST00000195295 268 ntBASIC3.75□□□□□ -1.81
Col3a1P08121 Igkv1-115-201ENSMUST00000198714 302 ntBASIC3.75□□□□□ -1.81
Col3a1P08121 Ighv1-68-201ENSMUST00000198789 294 ntBASIC3.75□□□□□ -1.81
Col3a1P08121 AC115034.1-201ENSMUST00000215393 3846 ntBASIC3.75□□□□□ -1.81
Col3a1P08121 CT030030.1-201ENSMUST00000218809 152 ntBASIC3.75□□□□□ -1.81
Col3a1P08121 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Col3a1P08121 AC156632.1-201ENSMUST00000220626 3845 ntBASIC3.75□□□□□ -1.81
Col3a1P08121 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC3.75□□□□□ -1.81
Col3a1P08121 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC3.75□□□□□ -1.81
Col3a1P08121 CT030704.1-201ENSMUST00000227521 699 ntBASIC3.75□□□□□ -1.81
Col3a1P08121 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC3.75□□□□□ -1.81
Col3a1P08121 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC3.75□□□□□ -1.81
Col3a1P08121 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Col3a1P08121 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
Col3a1P08121 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Col3a1P08121 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
Col3a1P08121 Gm44842-201ENSMUST00000209173 3372 ntBASIC3.75□□□□□ -1.81
Col3a1P08121 Gm44435-201ENSMUST00000204379 4119 ntBASIC3.75□□□□□ -1.81
Col3a1P08121 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
Col3a1P08121 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Col3a1P08121 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Col3a1P08121 Zfp640-202ENSMUST00000224116 1562 ntBASIC3.74□□□□□ -1.81
Col3a1P08121 Mir465c-2-201ENSMUST00000104757 81 ntBASIC3.74□□□□□ -1.81
Col3a1P08121 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC3.74□□□□□ -1.81
Col3a1P08121 Gm11321-201ENSMUST00000121257 902 ntBASIC3.74□□□□□ -1.81
Col3a1P08121 Gm22452-201ENSMUST00000122804 104 ntBASIC3.74□□□□□ -1.81
Col3a1P08121 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
Col3a1P08121 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC3.74□□□□□ -1.81
Col3a1P08121 Gm16362-201ENSMUST00000135189 214 ntBASIC3.74□□□□□ -1.81
Col3a1P08121 Gm22945-201ENSMUST00000158557 157 ntBASIC3.74□□□□□ -1.81
Col3a1P08121 Gm23205-201ENSMUST00000158671 103 ntBASIC3.74□□□□□ -1.81
Col3a1P08121 Mir3103-201ENSMUST00000175474 67 ntBASIC3.74□□□□□ -1.81
Col3a1P08121 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Col3a1P08121 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
Col3a1P08121 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC3.74□□□□□ -1.81
Col3a1P08121 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Col3a1P08121 AC122295.1-201ENSMUST00000223476 388 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms