Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Best1O88870 Gm25386-201ENSMUST00000157814 288 ntBASIC4.12□□□□□ -1.75
Best1O88870 Gm26373-201ENSMUST00000157833 103 ntBASIC4.12□□□□□ -1.75
Best1O88870 Gm22968-201ENSMUST00000157955 118 ntBASIC4.12□□□□□ -1.75
Best1O88870 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC4.12□□□□□ -1.75
Best1O88870 Gm23053-201ENSMUST00000175136 96 ntBASIC4.12□□□□□ -1.75
Best1O88870 Mir5136-201ENSMUST00000175573 76 ntBASIC4.12□□□□□ -1.75
Best1O88870 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Best1O88870 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Best1O88870 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Best1O88870 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC4.12□□□□□ -1.75
Best1O88870 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC4.12□□□□□ -1.75
Best1O88870 Gm36964-201ENSMUST00000191876 198 ntBASIC4.12□□□□□ -1.75
Best1O88870 Gm44266-201ENSMUST00000205235 500 ntBASIC4.12□□□□□ -1.75
Best1O88870 Gm7093-201ENSMUST00000223004 581 ntBASIC4.12□□□□□ -1.75
Best1O88870 AC074315.1-201ENSMUST00000228801 214 ntBASIC4.12□□□□□ -1.75
Best1O88870 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Best1O88870 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Best1O88870 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Best1O88870 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Best1O88870 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
Best1O88870 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
Best1O88870 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Best1O88870 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Best1O88870 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Best1O88870 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Best1O88870 Gm14429-201ENSMUST00000121881 2024 ntBASIC4.11□□□□□ -1.75
Best1O88870 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC4.11□□□□□ -1.75
Best1O88870 Gm15167-201ENSMUST00000121997 187 ntBASIC4.11□□□□□ -1.75
Best1O88870 Gm11506-201ENSMUST00000122414 470 ntBASIC4.11□□□□□ -1.75
Best1O88870 Gm8840-201ENSMUST00000122454 386 ntBASIC4.11□□□□□ -1.75
Best1O88870 Gm14364-201ENSMUST00000129209 267 ntBASIC4.11□□□□□ -1.75
Best1O88870 Gm23332-201ENSMUST00000157424 275 ntBASIC4.11□□□□□ -1.75
Best1O88870 Gm19898-201ENSMUST00000177490 251 ntBASIC4.11□□□□□ -1.75
Best1O88870 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Best1O88870 Gm8532-201ENSMUST00000179174 461 ntBASIC4.11□□□□□ -1.75
Best1O88870 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Best1O88870 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC4.11□□□□□ -1.75
Best1O88870 Gm7497-201ENSMUST00000183064 1003 ntBASIC4.11□□□□□ -1.75
Best1O88870 Gm27490-201ENSMUST00000184754 128 ntBASIC4.11□□□□□ -1.75
Best1O88870 Gm27190-201ENSMUST00000184890 542 ntBASIC4.11□□□□□ -1.75
Best1O88870 Gm28781-201ENSMUST00000185760 696 ntBASIC4.11□□□□□ -1.75
Best1O88870 Gm28755-201ENSMUST00000185773 199 ntBASIC4.11□□□□□ -1.75
Best1O88870 Gm29307-201ENSMUST00000187367 696 ntBASIC4.11□□□□□ -1.75
Best1O88870 Gm28650-201ENSMUST00000188413 411 ntBASIC4.11□□□□□ -1.75
Best1O88870 Gm29339-201ENSMUST00000189613 696 ntBASIC4.11□□□□□ -1.75
Best1O88870 Gm28155-201ENSMUST00000191066 151 ntBASIC4.11□□□□□ -1.75
Best1O88870 Gm29407-201ENSMUST00000191468 696 ntBASIC4.11□□□□□ -1.75
Best1O88870 Gm17953-201ENSMUST00000192061 667 ntBASIC4.11□□□□□ -1.75
Best1O88870 Gm43431-201ENSMUST00000198577 340 ntBASIC4.11□□□□□ -1.75
Best1O88870 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC4.11□□□□□ -1.75
Best1O88870 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC4.11□□□□□ -1.75
Best1O88870 Gm7624-201ENSMUST00000209702 435 ntBASIC4.11□□□□□ -1.75
Best1O88870 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC4.11□□□□□ -1.75
Best1O88870 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Best1O88870 Gm24045-201ENSMUST00000083113 98 ntBASIC4.11□□□□□ -1.75
Best1O88870 Mir346-201ENSMUST00000083547 98 ntBASIC4.11□□□□□ -1.75
Best1O88870 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Best1O88870 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.11□□□□□ -1.75
Best1O88870 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Best1O88870 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
Best1O88870 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Best1O88870 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Best1O88870 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Best1O88870 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC4.1□□□□□ -1.75
Best1O88870 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Best1O88870 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Best1O88870 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Best1O88870 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
Best1O88870 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Best1O88870 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Best1O88870 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Best1O88870 Gm23319-201ENSMUST00000104467 131 ntBASIC4.1□□□□□ -1.75
Best1O88870 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC4.1□□□□□ -1.75
Best1O88870 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC4.1□□□□□ -1.75
Best1O88870 Gm12191-201ENSMUST00000118307 348 ntBASIC4.1□□□□□ -1.75
Best1O88870 Gm9703-201ENSMUST00000119573 343 ntBASIC4.1□□□□□ -1.75
Best1O88870 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC4.1□□□□□ -1.75
Best1O88870 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC4.1□□□□□ -1.75
Best1O88870 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC4.1□□□□□ -1.75
Best1O88870 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Best1O88870 Gm22038-201ENSMUST00000157277 242 ntBASIC4.1□□□□□ -1.75
Best1O88870 Gm25391-201ENSMUST00000157342 134 ntBASIC4.1□□□□□ -1.75
Best1O88870 Gm22766-201ENSMUST00000158372 99 ntBASIC4.1□□□□□ -1.75
Best1O88870 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC4.1□□□□□ -1.75
Best1O88870 Gm28390-201ENSMUST00000185212 700 ntBASIC4.1□□□□□ -1.75
Best1O88870 Gm43586-201ENSMUST00000195948 310 ntBASIC4.1□□□□□ -1.75
Best1O88870 Gm18982-201ENSMUST00000198118 529 ntBASIC4.1□□□□□ -1.75
Best1O88870 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Best1O88870 Gm44472-201ENSMUST00000204922 943 ntBASIC4.1□□□□□ -1.75
Best1O88870 Gm19140-201ENSMUST00000209790 421 ntBASIC4.1□□□□□ -1.75
Best1O88870 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC4.1□□□□□ -1.75
Best1O88870 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC4.1□□□□□ -1.75
Best1O88870 AC157017.1-201ENSMUST00000220148 364 ntBASIC4.1□□□□□ -1.75
Best1O88870 AC155167.3-201ENSMUST00000226349 217 ntBASIC4.1□□□□□ -1.75
Best1O88870 AC098719.1-201ENSMUST00000228920 371 ntBASIC4.1□□□□□ -1.75
Best1O88870 Ear14-201ENSMUST00000049559 468 ntBASIC4.1□□□□□ -1.75
Best1O88870 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC4.1□□□□□ -1.75
Best1O88870 Gm10343-201ENSMUST00000096279 348 ntBASIC4.1□□□□□ -1.75
Best1O88870 Gm7381-201ENSMUST00000098958 300 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 103.9 ms