Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Gm13046-201ENSMUST00000117391 501 ntBASIC3.81□□□□□ -1.8
Hcn3O88705 Gm11576-201ENSMUST00000117433 417 ntBASIC3.81□□□□□ -1.8
Hcn3O88705 Gm14890-201ENSMUST00000117660 676 ntBASIC3.81□□□□□ -1.8
Hcn3O88705 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC3.81□□□□□ -1.8
Hcn3O88705 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Hcn3O88705 Gm25605-201ENSMUST00000158364 124 ntBASIC3.81□□□□□ -1.8
Hcn3O88705 Nron-204ENSMUST00000158971 370 ntBASIC3.81□□□□□ -1.8
Hcn3O88705 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC3.81□□□□□ -1.8
Hcn3O88705 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Hcn3O88705 Gm23415-201ENSMUST00000175519 83 ntBASIC3.81□□□□□ -1.8
Hcn3O88705 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC3.81□□□□□ -1.8
Hcn3O88705 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Hcn3O88705 Gm21758-201ENSMUST00000179336 819 ntBASIC3.81□□□□□ -1.8
Hcn3O88705 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Hcn3O88705 Gm28339-201ENSMUST00000185845 696 ntBASIC3.81□□□□□ -1.8
Hcn3O88705 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC3.81□□□□□ -1.8
Hcn3O88705 Gm29062-201ENSMUST00000186032 694 ntBASIC3.81□□□□□ -1.8
Hcn3O88705 Gm28057-201ENSMUST00000186603 615 ntBASIC3.81□□□□□ -1.8
Hcn3O88705 Gm28896-201ENSMUST00000188609 696 ntBASIC3.81□□□□□ -1.8
Hcn3O88705 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Hcn3O88705 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
Hcn3O88705 Gm31511-201ENSMUST00000193134 657 ntBASIC3.81□□□□□ -1.8
Hcn3O88705 Gm37353-201ENSMUST00000194497 313 ntBASIC3.81□□□□□ -1.8
Hcn3O88705 Gm38107-201ENSMUST00000194873 696 ntBASIC3.81□□□□□ -1.8
Hcn3O88705 Gm44391-201ENSMUST00000198490 93 ntBASIC3.81□□□□□ -1.8
Hcn3O88705 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC3.81□□□□□ -1.8
Hcn3O88705 Gm44142-201ENSMUST00000203358 311 ntBASIC3.81□□□□□ -1.8
Hcn3O88705 Gm45209-201ENSMUST00000207122 353 ntBASIC3.81□□□□□ -1.8
Hcn3O88705 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC3.81□□□□□ -1.8
Hcn3O88705 Gm18462-201ENSMUST00000208112 417 ntBASIC3.81□□□□□ -1.8
Hcn3O88705 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC3.81□□□□□ -1.8
Hcn3O88705 Gm45327-201ENSMUST00000211612 565 ntBASIC3.81□□□□□ -1.8
Hcn3O88705 Gm46193-201ENSMUST00000219399 364 ntBASIC3.81□□□□□ -1.8
Hcn3O88705 Gm18696-201ENSMUST00000220103 274 ntBASIC3.81□□□□□ -1.8
Hcn3O88705 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Hcn3O88705 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Hcn3O88705 Gm24950-201ENSMUST00000082768 191 ntBASIC3.81□□□□□ -1.8
Hcn3O88705 Gm23971-201ENSMUST00000083317 191 ntBASIC3.81□□□□□ -1.8
Hcn3O88705 Gm23849-201ENSMUST00000083833 191 ntBASIC3.81□□□□□ -1.8
Hcn3O88705 Gm26316-201ENSMUST00000083886 191 ntBASIC3.81□□□□□ -1.8
Hcn3O88705 Rnu2-10-201ENSMUST00000084010 191 ntBASIC3.81□□□□□ -1.8
Hcn3O88705 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Hcn3O88705 Gm5670-201ENSMUST00000093546 372 ntBASIC3.81□□□□□ -1.8
Hcn3O88705 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Hcn3O88705 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Hcn3O88705 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC3.81□□□□□ -1.8
Hcn3O88705 Gm43958-201ENSMUST00000204360 3544 ntBASIC3.8□□□□□ -1.8
Hcn3O88705 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Hcn3O88705 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Hcn3O88705 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC3.8□□□□□ -1.8
Hcn3O88705 Gm25726-201ENSMUST00000104529 129 ntBASIC3.8□□□□□ -1.8
Hcn3O88705 Gm14694-201ENSMUST00000121856 282 ntBASIC3.8□□□□□ -1.8
Hcn3O88705 Gm15147-201ENSMUST00000122263 483 ntBASIC3.8□□□□□ -1.8
Hcn3O88705 Gm15899-201ENSMUST00000128586 238 ntBASIC3.8□□□□□ -1.8
Hcn3O88705 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC3.8□□□□□ -1.8
Hcn3O88705 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC3.8□□□□□ -1.8
Hcn3O88705 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC3.8□□□□□ -1.8
Hcn3O88705 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC3.8□□□□□ -1.8
Hcn3O88705 Gm22080-201ENSMUST00000157591 106 ntBASIC3.8□□□□□ -1.8
Hcn3O88705 Gm22849-201ENSMUST00000157713 307 ntBASIC3.8□□□□□ -1.8
Hcn3O88705 Gm24876-201ENSMUST00000158780 92 ntBASIC3.8□□□□□ -1.8
Hcn3O88705 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC3.8□□□□□ -1.8
Hcn3O88705 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC3.8□□□□□ -1.8
Hcn3O88705 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Hcn3O88705 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Hcn3O88705 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC3.8□□□□□ -1.8
Hcn3O88705 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC3.8□□□□□ -1.8
Hcn3O88705 Gm8600-201ENSMUST00000186320 905 ntBASIC3.8□□□□□ -1.8
Hcn3O88705 Gm6802-202ENSMUST00000186566 126 ntBASIC3.8□□□□□ -1.8
Hcn3O88705 Gm5034-201ENSMUST00000199115 634 ntBASIC3.8□□□□□ -1.8
Hcn3O88705 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC3.8□□□□□ -1.8
Hcn3O88705 Gm19726-201ENSMUST00000205008 240 ntBASIC3.8□□□□□ -1.8
Hcn3O88705 Gm18423-201ENSMUST00000205144 1074 ntBASIC3.8□□□□□ -1.8
Hcn3O88705 Gm5373-201ENSMUST00000212113 1050 ntBASIC3.8□□□□□ -1.8
Hcn3O88705 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC3.8□□□□□ -1.8
Hcn3O88705 AC153141.1-201ENSMUST00000218636 501 ntBASIC3.8□□□□□ -1.8
Hcn3O88705 AC116465.1-201ENSMUST00000220324 235 ntBASIC3.8□□□□□ -1.8
Hcn3O88705 AC167192.2-201ENSMUST00000224794 198 ntBASIC3.8□□□□□ -1.8
Hcn3O88705 AC113031.5-201ENSMUST00000227116 606 ntBASIC3.8□□□□□ -1.8
Hcn3O88705 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Hcn3O88705 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Hcn3O88705 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Hcn3O88705 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Hcn3O88705 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Hcn3O88705 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Hcn3O88705 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Hcn3O88705 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Hcn3O88705 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
Hcn3O88705 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Hcn3O88705 Gm37903-201ENSMUST00000192122 2381 ntBASIC3.8□□□□□ -1.8
Hcn3O88705 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Hcn3O88705 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Hcn3O88705 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Hcn3O88705 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC3.79□□□□□ -1.8
Hcn3O88705 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Hcn3O88705 Mir92b-201ENSMUST00000102300 83 ntBASIC3.79□□□□□ -1.8
Hcn3O88705 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Hcn3O88705 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Hcn3O88705 Gm24318-201ENSMUST00000104490 131 ntBASIC3.79□□□□□ -1.8
Hcn3O88705 Gm11923-201ENSMUST00000118135 508 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms