Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Lmx1bO88609 Gm14355-201ENSMUST00000117352 264 ntBASIC3.8□□□□□ -1.8
Lmx1bO88609 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC3.8□□□□□ -1.8
Lmx1bO88609 Gm15195-201ENSMUST00000118775 263 ntBASIC3.8□□□□□ -1.8
Lmx1bO88609 Gm12495-201ENSMUST00000119750 447 ntBASIC3.8□□□□□ -1.8
Lmx1bO88609 Gm14333-201ENSMUST00000130484 264 ntBASIC3.8□□□□□ -1.8
Lmx1bO88609 Gm22791-201ENSMUST00000157232 145 ntBASIC3.8□□□□□ -1.8
Lmx1bO88609 Gm22816-201ENSMUST00000157450 117 ntBASIC3.8□□□□□ -1.8
Lmx1bO88609 Gm25666-201ENSMUST00000157702 107 ntBASIC3.8□□□□□ -1.8
Lmx1bO88609 Gm23542-201ENSMUST00000158208 96 ntBASIC3.8□□□□□ -1.8
Lmx1bO88609 Gm22085-201ENSMUST00000158344 110 ntBASIC3.8□□□□□ -1.8
Lmx1bO88609 Gm23579-201ENSMUST00000158528 103 ntBASIC3.8□□□□□ -1.8
Lmx1bO88609 Gm17109-201ENSMUST00000163985 358 ntBASIC3.8□□□□□ -1.8
Lmx1bO88609 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Lmx1bO88609 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Lmx1bO88609 Mir6393-201ENSMUST00000183709 94 ntBASIC3.8□□□□□ -1.8
Lmx1bO88609 Gm27254-201ENSMUST00000183926 517 ntBASIC3.8□□□□□ -1.8
Lmx1bO88609 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC3.8□□□□□ -1.8
Lmx1bO88609 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC3.8□□□□□ -1.8
Lmx1bO88609 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC3.8□□□□□ -1.8
Lmx1bO88609 Ighv1-6-201ENSMUST00000193849 293 ntBASIC3.8□□□□□ -1.8
Lmx1bO88609 Gm2077-201ENSMUST00000195017 319 ntBASIC3.8□□□□□ -1.8
Lmx1bO88609 Gm43115-201ENSMUST00000196244 160 ntBASIC3.8□□□□□ -1.8
Lmx1bO88609 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC3.8□□□□□ -1.8
Lmx1bO88609 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC3.8□□□□□ -1.8
Lmx1bO88609 Gm44266-201ENSMUST00000205235 500 ntBASIC3.8□□□□□ -1.8
Lmx1bO88609 Gm45367-201ENSMUST00000210171 347 ntBASIC3.8□□□□□ -1.8
Lmx1bO88609 Gm45523-201ENSMUST00000210712 799 ntBASIC3.8□□□□□ -1.8
Lmx1bO88609 Gm39197-201ENSMUST00000212069 457 ntBASIC3.8□□□□□ -1.8
Lmx1bO88609 Gm45814-201ENSMUST00000212646 775 ntBASIC3.8□□□□□ -1.8
Lmx1bO88609 Gm45735-201ENSMUST00000212779 319 ntBASIC3.8□□□□□ -1.8
Lmx1bO88609 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Lmx1bO88609 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Lmx1bO88609 AC164567.2-201ENSMUST00000219363 445 ntBASIC3.8□□□□□ -1.8
Lmx1bO88609 CT571268.1-201ENSMUST00000222320 407 ntBASIC3.8□□□□□ -1.8
Lmx1bO88609 AC154521.1-201ENSMUST00000222635 330 ntBASIC3.8□□□□□ -1.8
Lmx1bO88609 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Lmx1bO88609 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Lmx1bO88609 Snord42a-201ENSMUST00000082606 65 ntBASIC3.8□□□□□ -1.8
Lmx1bO88609 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Lmx1bO88609 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Lmx1bO88609 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Lmx1bO88609 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
Lmx1bO88609 AC122887.2-201ENSMUST00000219465 1603 ntBASIC3.8□□□□□ -1.8
Lmx1bO88609 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Lmx1bO88609 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Lmx1bO88609 Gm43065-201ENSMUST00000198971 2092 ntBASIC3.8□□□□□ -1.8
Lmx1bO88609 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Lmx1bO88609 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC3.79□□□□□ -1.8
Lmx1bO88609 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Lmx1bO88609 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Lmx1bO88609 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Lmx1bO88609 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
Lmx1bO88609 Gm43793-201ENSMUST00000201645 1333 ntBASIC3.79□□□□□ -1.8
Lmx1bO88609 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Lmx1bO88609 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Lmx1bO88609 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC3.79□□□□□ -1.8
Lmx1bO88609 Gm42717-201ENSMUST00000197309 3463 ntBASIC3.79□□□□□ -1.8
Lmx1bO88609 Gm24788-201ENSMUST00000104283 156 ntBASIC3.79□□□□□ -1.8
Lmx1bO88609 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC3.79□□□□□ -1.8
Lmx1bO88609 Gm8666-201ENSMUST00000117517 292 ntBASIC3.79□□□□□ -1.8
Lmx1bO88609 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC3.79□□□□□ -1.8
Lmx1bO88609 Gm12173-201ENSMUST00000117622 273 ntBASIC3.79□□□□□ -1.8
Lmx1bO88609 Gm14647-201ENSMUST00000119392 680 ntBASIC3.79□□□□□ -1.8
Lmx1bO88609 Gm11862-201ENSMUST00000119678 659 ntBASIC3.79□□□□□ -1.8
Lmx1bO88609 Gm14656-201ENSMUST00000120342 502 ntBASIC3.79□□□□□ -1.8
Lmx1bO88609 Gm14649-201ENSMUST00000121814 324 ntBASIC3.79□□□□□ -1.8
Lmx1bO88609 Gm14765-201ENSMUST00000121954 326 ntBASIC3.79□□□□□ -1.8
Lmx1bO88609 Gm25104-201ENSMUST00000122476 163 ntBASIC3.79□□□□□ -1.8
Lmx1bO88609 Gm22204-201ENSMUST00000122654 327 ntBASIC3.79□□□□□ -1.8
Lmx1bO88609 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC3.79□□□□□ -1.8
Lmx1bO88609 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Lmx1bO88609 Gm24961-201ENSMUST00000157918 184 ntBASIC3.79□□□□□ -1.8
Lmx1bO88609 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC3.79□□□□□ -1.8
Lmx1bO88609 Gm25671-201ENSMUST00000178612 105 ntBASIC3.79□□□□□ -1.8
Lmx1bO88609 Gm23307-201ENSMUST00000179167 105 ntBASIC3.79□□□□□ -1.8
Lmx1bO88609 Gm25286-201ENSMUST00000179790 105 ntBASIC3.79□□□□□ -1.8
Lmx1bO88609 Gm8816-201ENSMUST00000182280 1163 ntBASIC3.79□□□□□ -1.8
Lmx1bO88609 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC3.79□□□□□ -1.8
Lmx1bO88609 Gm44354-201ENSMUST00000196017 143 ntBASIC3.79□□□□□ -1.8
Lmx1bO88609 Gm43510-201ENSMUST00000197922 353 ntBASIC3.79□□□□□ -1.8
Lmx1bO88609 Gm35702-201ENSMUST00000198653 511 ntBASIC3.79□□□□□ -1.8
Lmx1bO88609 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC3.79□□□□□ -1.8
Lmx1bO88609 Gm44609-201ENSMUST00000207157 460 ntBASIC3.79□□□□□ -1.8
Lmx1bO88609 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC3.79□□□□□ -1.8
Lmx1bO88609 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC3.79□□□□□ -1.8
Lmx1bO88609 AC132315.1-201ENSMUST00000221771 390 ntBASIC3.79□□□□□ -1.8
Lmx1bO88609 AC166341.3-201ENSMUST00000221861 114 ntBASIC3.79□□□□□ -1.8
Lmx1bO88609 AC090496.1-201ENSMUST00000226020 260 ntBASIC3.79□□□□□ -1.8
Lmx1bO88609 AC150560.2-201ENSMUST00000227208 171 ntBASIC3.79□□□□□ -1.8
Lmx1bO88609 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Lmx1bO88609 Gm5548-201ENSMUST00000055878 397 ntBASIC3.79□□□□□ -1.8
Lmx1bO88609 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC3.79□□□□□ -1.8
Lmx1bO88609 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Lmx1bO88609 Gm10042-201ENSMUST00000079884 78 ntBASIC3.79□□□□□ -1.8
Lmx1bO88609 Gm24764-201ENSMUST00000083686 199 ntBASIC3.79□□□□□ -1.8
Lmx1bO88609 Gm26165-201ENSMUST00000083791 138 ntBASIC3.79□□□□□ -1.8
Lmx1bO88609 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC3.79□□□□□ -1.8
Lmx1bO88609 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Lmx1bO88609 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms